Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_pT_C10
         (717 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY160083-1|AAN77520.1| 1910|Drosophila melanogaster alpha1U prot...    31   2.1  
AE014298-2027|AAN09585.1| 2148|Drosophila melanogaster CG1517-PC...    31   2.1  
AE014298-2026|AAF48365.2| 2196|Drosophila melanogaster CG1517-PB...    31   2.1  
BT022423-1|AAY54839.1|  219|Drosophila melanogaster IP08047p pro...    29   6.3  
AE014297-439|AAG22206.1|  211|Drosophila melanogaster CG17917-PA...    29   6.3  
AE013599-927|ABC66065.1|  168|Drosophila melanogaster CG34033-PA...    29   6.3  
AE014296-1304|AAN12045.1| 9196|Drosophila melanogaster CG32377-P...    29   8.4  

>AY160083-1|AAN77520.1| 1910|Drosophila melanogaster alpha1U protein
           protein.
          Length = 1910

 Score = 30.7 bits (66), Expect = 2.1
 Identities = 16/48 (33%), Positives = 27/48 (56%)
 Frame = +3

Query: 87  KIVKNSGVSPVAFNFDISSIFGSSGRVGKLILFPTCVVLSSLHISRPL 230
           ++V+    SP+   F +  IFG   ++G LI+F  C+++ S  IS  L
Sbjct: 482 RVVRLIKASPMLEGF-VYKIFGPGKKLGSLIIFTMCLLIISSSISMQL 528


>AE014298-2027|AAN09585.1| 2148|Drosophila melanogaster CG1517-PC,
           isoform C protein.
          Length = 2148

 Score = 30.7 bits (66), Expect = 2.1
 Identities = 16/48 (33%), Positives = 27/48 (56%)
 Frame = +3

Query: 87  KIVKNSGVSPVAFNFDISSIFGSSGRVGKLILFPTCVVLSSLHISRPL 230
           ++V+    SP+   F +  IFG   ++G LI+F  C+++ S  IS  L
Sbjct: 720 RVVRLIKASPMLEGF-VYKIFGPGKKLGSLIIFTMCLLIISSSISMQL 766


>AE014298-2026|AAF48365.2| 2196|Drosophila melanogaster CG1517-PB,
           isoform B protein.
          Length = 2196

 Score = 30.7 bits (66), Expect = 2.1
 Identities = 16/48 (33%), Positives = 27/48 (56%)
 Frame = +3

Query: 87  KIVKNSGVSPVAFNFDISSIFGSSGRVGKLILFPTCVVLSSLHISRPL 230
           ++V+    SP+   F +  IFG   ++G LI+F  C+++ S  IS  L
Sbjct: 768 RVVRLIKASPMLEGF-VYKIFGPGKKLGSLIIFTMCLLIISSSISMQL 814


>BT022423-1|AAY54839.1|  219|Drosophila melanogaster IP08047p
           protein.
          Length = 219

 Score = 29.1 bits (62), Expect = 6.3
 Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 10/50 (20%)
 Frame = -3

Query: 373 TSTENFQEFLFQKRDYFNFD-------SAKSE---ETIRFVTSYDYAHPI 254
           T T  F   L+++RDY  FD       S K     ET RF   Y + HP+
Sbjct: 140 TGTHRFVFLLYKQRDYTKFDFPKLPKHSVKGRSGFETKRFAKKYRFGHPV 189


>AE014297-439|AAG22206.1|  211|Drosophila melanogaster CG17917-PA
           protein.
          Length = 211

 Score = 29.1 bits (62), Expect = 6.3
 Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 10/50 (20%)
 Frame = -3

Query: 373 TSTENFQEFLFQKRDYFNFD-------SAKSE---ETIRFVTSYDYAHPI 254
           T T  F   L+++RDY  FD       S K     ET RF   Y + HP+
Sbjct: 132 TGTHRFVFLLYKQRDYTKFDFPKLPKHSVKGRSGFETKRFAKKYRFGHPV 181


>AE013599-927|ABC66065.1|  168|Drosophila melanogaster CG34033-PA
           protein.
          Length = 168

 Score = 29.1 bits (62), Expect = 6.3
 Identities = 15/48 (31%), Positives = 25/48 (52%)
 Frame = -3

Query: 424 YVALNRKADVFASNKGSTSTENFQEFLFQKRDYFNFDSAKSEETIRFV 281
           YV+ N+  +    N    + E    ++ Q+ D+F F+SAK  E  RF+
Sbjct: 91  YVSNNKSIEYSPHNSKLVNNEGCV-YVKQQNDFFKFESAKCREHRRFI 137


>AE014296-1304|AAN12045.1| 9196|Drosophila melanogaster CG32377-PA
           protein.
          Length = 9196

 Score = 28.7 bits (61), Expect = 8.4
 Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 8/60 (13%)
 Frame = -3

Query: 490 TPDRWHGVLVLPPEIVEDYLWIYVALNRK--------ADVFASNKGSTSTENFQEFLFQK 335
           TPDR   V  L  +I+ D   I   L  K        + +F+SNK S+STEN ++   +K
Sbjct: 287 TPDRKVDVSSLEQQILTDADLILDGLGSKCVPEQKVQSPIFSSNKASSSTENLEDICEKK 346


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,560,590
Number of Sequences: 53049
Number of extensions: 587438
Number of successful extensions: 1694
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1637
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1694
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3190721655
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)