Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_pT_C08
         (535 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81484-5|CAB03972.2|  293|Caenorhabditis elegans Hypothetical pr...    27   6.4  
Z68006-3|CAA91997.2|  633|Caenorhabditis elegans Hypothetical pr...    27   6.4  

>Z81484-5|CAB03972.2|  293|Caenorhabditis elegans Hypothetical
           protein C47A10.8 protein.
          Length = 293

 Score = 27.5 bits (58), Expect = 6.4
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = -1

Query: 67  IRILSLILIVIFYSXFGCLIQY 2
           I I+S+I  V+FY   GCL  Y
Sbjct: 127 IWIVSIIFCVLFYEIIGCLFTY 148


>Z68006-3|CAA91997.2|  633|Caenorhabditis elegans Hypothetical
           protein K09C8.4 protein.
          Length = 633

 Score = 27.5 bits (58), Expect = 6.4
 Identities = 10/36 (27%), Positives = 19/36 (52%)
 Frame = +2

Query: 197 LDRLRPSPWTPSWVLSGVFFCHLHGQTWLYAETLIN 304
           LD+LR + W   W +    +  +HG+T +  + + N
Sbjct: 195 LDKLRKNGWASKWRVVANKYLRIHGKTAMSDQDIFN 230


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,921,738
Number of Sequences: 27780
Number of extensions: 174014
Number of successful extensions: 306
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 302
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 306
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1060113800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)