Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_pT_C06
         (505 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ182016-1|ABA56308.1|  353|Anopheles gambiae G(alpha)i protein.       26   0.63 
AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin s...    24   3.4  

>DQ182016-1|ABA56308.1|  353|Anopheles gambiae G(alpha)i protein.
          Length = 353

 Score = 26.2 bits (55), Expect = 0.63
 Identities = 13/37 (35%), Positives = 23/37 (62%)
 Frame = -2

Query: 402 FVLSSILTLLIFSGMQMYKPQLILSPMTIIFGGYLGS 292
           FV +SI+  L  +   +++ +++ SP+TI F  Y GS
Sbjct: 258 FVETSII--LFLNKKDLFEEKIVRSPLTICFPEYTGS 292


>AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin
           subunit AgBnu protein.
          Length = 803

 Score = 23.8 bits (49), Expect = 3.4
 Identities = 9/20 (45%), Positives = 15/20 (75%)
 Frame = -3

Query: 503 NELLSSRLNSVKIQVGTNYS 444
           +ELL S+ N++KI+   +YS
Sbjct: 68  HELLESKCNALKIETNDDYS 87


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 538,661
Number of Sequences: 2352
Number of extensions: 11185
Number of successful extensions: 64
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 63
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 64
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 45245913
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)