Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P05_pT_B22
(749 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_04_0245 + 15995689-15995742,15995979-15996075,15996165-159961... 33 0.24
06_03_0479 - 21289903-21290124,21290207-21290342,21290435-212904... 33 0.24
01_01_0653 - 4981517-4981738,4981841-4981976,4982066-4982121,498... 33 0.32
07_01_0657 - 4915264-4915386,4915586-4915714,4917773-4917859,491... 31 0.74
03_02_0211 - 6436275-6436361,6436969-6437235,6438475-6438543,643... 31 0.98
02_02_0121 + 7005356-7005418,7007533-7007632,7007713-7007810,700... 31 0.98
08_02_1626 - 28341132-28341556,28341927-28342196,28342315-283427... 26 1.3
10_08_0788 + 20553587-20553726,20554131-20554196,20554695-205549... 29 3.0
06_02_0200 - 12946139-12946282,12947636-12947842,12949506-129496... 29 3.0
08_02_1002 + 23439642-23440046,23440558-23440761,23440874-234409... 28 6.9
11_06_0656 + 25926192-25926289,25927530-25927659,25928248-259282... 28 9.1
06_03_1053 + 27224824-27225618 28 9.1
04_03_0640 + 18257612-18257787,18257831-18257906,18259105-18260556 28 9.1
02_04_0047 + 19222640-19223062 28 9.1
01_07_0008 + 40389744-40389896,40389967-40390048,40390693-403908... 28 9.1
>09_04_0245 +
15995689-15995742,15995979-15996075,15996165-15996185,
15996442-15996573,15996707-15996834,15996919-15997203,
15997391-15997521,15999700-15999817,16000609-16000703,
16001437-16001511,16001860-16001911,16002767-16002859,
16003625-16003690,16003785-16003867,16003942-16004054,
16005271-16005410,16005569-16005643,16006084-16006160,
16006426-16006514,16008039-16008085,16009004-16009138,
16009298-16009345,16009605-16009667,16009709-16009730,
16010284-16010458,16014250-16014321,16014887-16014958,
16015904-16016005,16016197-16016225,16016333-16016403,
16016549-16016597,16016684-16016784,16017495-16017623,
16017683-16017752,16017975-16018194,16019368-16019389,
16019457-16019604,16021569-16021693,16022344-16022774,
16022984-16023110,16023241-16023292,16023351-16023502
Length = 1461
Score = 33.1 bits (72), Expect = 0.24
Identities = 18/47 (38%), Positives = 24/47 (51%)
Frame = -2
Query: 226 APPVEADACSAGDRQRLTHREPRVRAESEAGRARGQLRRPPATGETT 86
APP+ A +A DR LT REP + E G A+ +P + TT
Sbjct: 516 APPLHAQPAAASDRILLTRREPSMDQLKELGWAKRWSSQPYVSCRTT 562
>06_03_0479 -
21289903-21290124,21290207-21290342,21290435-21290490,
21290734-21290811,21290902-21290988,21291067-21291127,
21291220-21291308,21291448-21291545,21291655-21291754,
21293968-21294030
Length = 329
Score = 33.1 bits (72), Expect = 0.24
Identities = 17/38 (44%), Positives = 22/38 (57%)
Frame = +1
Query: 595 SCPQESVDQLLDHKTDVIMFQGLRDSHCLVVXPGRHVL 708
S P SVD+L D +DV+ F GL CL V G ++L
Sbjct: 96 SSPVASVDELADQVSDVLDFFGLGPVMCLGVTAGAYIL 133
>01_01_0653 -
4981517-4981738,4981841-4981976,4982066-4982121,
4982228-4982284,4982373-4982450,4982533-4982619,
4982707-4982767,4982862-4982950,4983048-4983145,
4983242-4983341,4983983-4984042
Length = 347
Score = 32.7 bits (71), Expect = 0.32
Identities = 16/36 (44%), Positives = 21/36 (58%)
Frame = +1
Query: 601 PQESVDQLLDHKTDVIMFQGLRDSHCLVVXPGRHVL 708
P SVD+L+D DV+ F GL CL V G ++L
Sbjct: 97 PVPSVDELVDQVADVLDFFGLGSVMCLGVTAGAYIL 132
>07_01_0657 -
4915264-4915386,4915586-4915714,4917773-4917859,
4918220-4918368,4918498-4918555,4918632-4920614,
4922064-4922123
Length = 862
Score = 31.5 bits (68), Expect = 0.74
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = -3
Query: 330 YKIMNTEHTMYLKLDVNVDGYGDRQAWGSNNSNEKRHLWKLTPVVLETGN 181
++++N+E+ + LD N++G GDR A K HL + V GN
Sbjct: 390 FELLNSENILDSSLDPNLEGLGDRHANVILKDISKEHLLDIPHVSSACGN 439
>03_02_0211 -
6436275-6436361,6436969-6437235,6438475-6438543,
6439108-6439236,6439319-6439480,6439558-6439678,
6439813-6439928,6440697-6440762,6441010-6441091,
6441236-6441327,6441430-6441537,6441919-6442013,
6442092-6442234,6442336-6442364,6442452-6442571,
6442645-6442734,6443116-6443181,6443267-6443380,
6443482-6443574
Length = 682
Score = 31.1 bits (67), Expect = 0.98
Identities = 33/141 (23%), Positives = 68/141 (48%), Gaps = 9/141 (6%)
Frame = -3
Query: 687 YDKAVTITKSL-EHD-NVGFMIEELIDRLLRAREPNVFAYAD-KLWSAGHHDIVNDFFPS 517
Y+ A+++ +SL E D NV F+++ +D+L+R E VFAY +L G H +
Sbjct: 501 YNHAISVIQSLGEEDINVKFLVQ--LDKLIRLLETPVFAYLRLQLLEPGKHTWLLKTLYG 558
Query: 516 EVKLITKQE------RVKIIGRYYDQALKLDANVDSYNDRLAWGDSKDKTSHRVSWKLIP 355
+ L+ +Q R ++ + + LK ++ + Y+ L + ++ S+ I
Sbjct: 559 LLMLLPQQSAAFKILRTRLKTVPFSENLKRTSSTNPYSQILQVTEDGNRNHDTQSYNAIN 618
Query: 354 VWENNKLLYKIMNTEHTMYLK 292
+ + ++ M +H ++LK
Sbjct: 619 -FPSRLHQFESMQQQHRVHLK 638
>02_02_0121 +
7005356-7005418,7007533-7007632,7007713-7007810,
7007933-7008021,7008111-7008171,7008253-7008339,
7008409-7008486,7008583-7008639,7008731-7008786,
7008877-7009012,7009103-7009324
Length = 348
Score = 31.1 bits (67), Expect = 0.98
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = +1
Query: 595 SCPQESVDQLLDHKTDVIMFQGLRDSHCLVVXPGRHVL 708
+ P SVD L D DV+ F GL CL V G ++L
Sbjct: 96 NAPIPSVDDLADQVADVLDFFGLGSVMCLGVSAGAYIL 133
>08_02_1626 -
28341132-28341556,28341927-28342196,28342315-28342726,
28342840-28343127,28343833-28343941,28344028-28344230
Length = 568
Score = 25.8 bits (54), Expect(2) = 1.3
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = -3
Query: 747 AFLNKQLXMDLLFKYVSTGXYDKAVTITKSLEHDNVGFMIEELIDRL 607
A+L K+L + L K Y K + S + +N IEEL+D+L
Sbjct: 169 AYLGKELAVFL--KQDENHPYKKWIETYASSDFENNALQIEELLDKL 213
Score = 23.4 bits (48), Expect(2) = 1.3
Identities = 8/17 (47%), Positives = 14/17 (82%)
Frame = -3
Query: 492 ERVKIIGRYYDQALKLD 442
E ++IIG+ Y QA++L+
Sbjct: 220 EELEIIGKLYQQAMRLE 236
>10_08_0788 +
20553587-20553726,20554131-20554196,20554695-20554926,
20555033-20555237,20555335-20555441
Length = 249
Score = 29.5 bits (63), Expect = 3.0
Identities = 13/39 (33%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Frame = -3
Query: 276 DGYGDRQAWGSNNSNEKRHLW-KLTPVVLETGNVLLIEN 163
D Y D + W N N ++H+W + P GN L+ N
Sbjct: 6 DSYIDGKGWEQENQNSRKHIWQRHGPDRERNGNSKLVVN 44
>06_02_0200 -
12946139-12946282,12947636-12947842,12949506-12949629,
12950167-12950369,12950922-12951620,12951723-12951784,
12952395-12952404,12954905-12957631
Length = 1391
Score = 29.5 bits (63), Expect = 3.0
Identities = 16/50 (32%), Positives = 28/50 (56%)
Frame = +1
Query: 328 IQQLVILPYRDKLPAHSVTSLVLAVAPGQAIVVRVDIGVQLQSLIVISSD 477
+ +V++ R + + L+VAP +AI V VD GV+ S+ V+ +D
Sbjct: 148 VSAVVVVDARTLVVLRTAFHGALSVAPPRAIAVAVDAGVEDASVSVVLAD 197
>08_02_1002 +
23439642-23440046,23440558-23440761,23440874-23440990,
23441116-23441511,23441586-23441938,23442067-23442187,
23442602-23442781,23442813-23442896,23444398-23444523,
23445286-23445588
Length = 762
Score = 28.3 bits (60), Expect = 6.9
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +2
Query: 263 SPYPSTFTSSFRYIVCSVFI 322
S +PSTFTS R+I CS+ I
Sbjct: 555 SIHPSTFTSFSRFITCSICI 574
>11_06_0656 +
25926192-25926289,25927530-25927659,25928248-25928294,
25929274-25929388,25929504-25929753,25930079-25930239,
25930372-25930567,25930672-25930836,25930918-25931070,
25931160-25931248,25931385-25931423,25931460-25931681,
25933503-25934165
Length = 775
Score = 27.9 bits (59), Expect = 9.1
Identities = 16/34 (47%), Positives = 18/34 (52%)
Frame = -2
Query: 163 PRVRAESEAGRARGQLRRPPATGETTETSMVXPG 62
P R S+AG +RG LRRPP E S V G
Sbjct: 589 PLERVASKAGGSRGWLRRPPP--EQARASTVEAG 620
>06_03_1053 + 27224824-27225618
Length = 264
Score = 27.9 bits (59), Expect = 9.1
Identities = 17/43 (39%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
Frame = -2
Query: 226 APPVEADACSAGDRQ--RLTHREPRVRAESEAGRARGQLRRPP 104
A E + C G RQ + R P + AE EA A G+L PP
Sbjct: 165 AAAAEEEECGRGRRQYEEMRDRYPLLVAEVEALAAAGELALPP 207
>04_03_0640 + 18257612-18257787,18257831-18257906,18259105-18260556
Length = 567
Score = 27.9 bits (59), Expect = 9.1
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = -3
Query: 264 DRQAWGSNNSNEKRHLWKLTPVVLETGNVLLIENHEYGQSLKLDA 130
DR W S+ E RHL ++ V + + LL E + Y +K++A
Sbjct: 192 DRLEWHSHRETEARHLRQIKDAVYDAED-LLDEYNYYALKVKVEA 235
>02_04_0047 + 19222640-19223062
Length = 140
Score = 27.9 bits (59), Expect = 9.1
Identities = 16/46 (34%), Positives = 19/46 (41%)
Frame = -2
Query: 172 HREPRVRAESEAGRARGQLRRPPATGETTETSMVXPGYFGWXINAW 35
H VR E+E GR G PPA GE P + W + W
Sbjct: 31 HWASTVREEAEDGR--GAAEAPPAAGEVGGEGCGWPWPWPWELVRW 74
>01_07_0008 +
40389744-40389896,40389967-40390048,40390693-40390808,
40391107-40391195,40391859-40391904,40392248-40392716,
40392825-40392952,40393182-40393253,40393512-40393885,
40394005-40394545,40394653-40394952,40395167-40395268
Length = 823
Score = 27.9 bits (59), Expect = 9.1
Identities = 16/52 (30%), Positives = 27/52 (51%)
Frame = -3
Query: 498 KQERVKIIGRYYDQALKLDANVDSYNDRLAWGDSKDKTSHRVSWKLIPVWEN 343
K++ K I +++ LK+D NVD+ N A D R+ W L P +++
Sbjct: 102 KKKNGKTIAEAHER-LKVD-NVDALNCYYAHADKNSTFQRRIYWMLDPAYDH 151
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,394,070
Number of Sequences: 37544
Number of extensions: 389569
Number of successful extensions: 1370
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1322
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1370
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1992480932
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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