Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_pT_B22
         (749 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY047579-1|AAK77311.1|  422|Drosophila melanogaster GH09088p pro...    31   1.3  
AE014134-2814|AAF53593.1|  422|Drosophila melanogaster CG6304-PA...    31   1.3  
L41945-1|AAB51185.1|  429|Drosophila melanogaster cytoplasmic dy...    29   8.9  
AY060417-1|AAL25456.1|  177|Drosophila melanogaster LD38082p pro...    29   8.9  
AE014298-2699|AAF48824.1|  177|Drosophila melanogaster CG6023-PA...    29   8.9  
AE014298-2698|AAS65401.1|  332|Drosophila melanogaster CG6023-PB...    29   8.9  
AE014296-396|AAF47598.1| 2517|Drosophila melanogaster CG11814-PA...    29   8.9  

>AY047579-1|AAK77311.1|  422|Drosophila melanogaster GH09088p
           protein.
          Length = 422

 Score = 31.5 bits (68), Expect = 1.3
 Identities = 16/50 (32%), Positives = 29/50 (58%)
 Frame = -2

Query: 523 PFGSKIDHQARKGENHRKILRSSSEAGRQCRLVQRSPGLGRQQGQD*SQS 374
           P G++IDH+ R+ E+ RKI   + +   Q R+  R P +   +G + S++
Sbjct: 129 PAGNRIDHEERRREHDRKIAVEALKLAEQRRM--RDPVIAPTEGNENSKN 176


>AE014134-2814|AAF53593.1|  422|Drosophila melanogaster CG6304-PA
           protein.
          Length = 422

 Score = 31.5 bits (68), Expect = 1.3
 Identities = 16/50 (32%), Positives = 29/50 (58%)
 Frame = -2

Query: 523 PFGSKIDHQARKGENHRKILRSSSEAGRQCRLVQRSPGLGRQQGQD*SQS 374
           P G++IDH+ R+ E+ RKI   + +   Q R+  R P +   +G + S++
Sbjct: 129 PAGNRIDHEERRREHDRKIAVEALKLAEQRRM--RDPVIAPTEGNENSKN 176


>L41945-1|AAB51185.1|  429|Drosophila melanogaster cytoplasmic
           dynein intermediatechain protein.
          Length = 429

 Score = 28.7 bits (61), Expect = 8.9
 Identities = 15/38 (39%), Positives = 21/38 (55%)
 Frame = -3

Query: 474 GRYYDQALKLDANVDSYNDRLAWGDSKDKTSHRVSWKL 361
           GR  ++AL    NVD Y D +  GDS++    R S +L
Sbjct: 26  GRVIERALS--ENVDIYTDYIGGGDSEEANDERSSMRL 61


>AY060417-1|AAL25456.1|  177|Drosophila melanogaster LD38082p
           protein.
          Length = 177

 Score = 28.7 bits (61), Expect = 8.9
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = -3

Query: 222 HLWKLTPVVLETGNVLLIENHEYGQSLKL 136
           H+W +    +ET  VL I  H+Y Q +KL
Sbjct: 147 HIWPMFGAAVETIKVLTIIEHKYEQLIKL 175


>AE014298-2699|AAF48824.1|  177|Drosophila melanogaster CG6023-PA,
           isoform A protein.
          Length = 177

 Score = 28.7 bits (61), Expect = 8.9
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = -3

Query: 222 HLWKLTPVVLETGNVLLIENHEYGQSLKL 136
           H+W +    +ET  VL I  H+Y Q +KL
Sbjct: 147 HIWPMFGAAVETIKVLTIIEHKYEQLIKL 175


>AE014298-2698|AAS65401.1|  332|Drosophila melanogaster CG6023-PB,
           isoform B protein.
          Length = 332

 Score = 28.7 bits (61), Expect = 8.9
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = -3

Query: 222 HLWKLTPVVLETGNVLLIENHEYGQSLKL 136
           H+W +    +ET  VL I  H+Y Q +KL
Sbjct: 302 HIWPMFGAAVETIKVLTIIEHKYEQLIKL 330


>AE014296-396|AAF47598.1| 2517|Drosophila melanogaster CG11814-PA
            protein.
          Length = 2517

 Score = 28.7 bits (61), Expect = 8.9
 Identities = 15/41 (36%), Positives = 21/41 (51%)
 Frame = -3

Query: 732  QLXMDLLFKYVSTGXYDKAVTITKSLEHDNVGFMIEELIDR 610
            QL ++ L K+     +  AVT   SL H  +   +E LIDR
Sbjct: 1347 QLQLEWLTKFFEPNSFRVAVTNDSSLSHSELRTRVELLIDR 1387


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,784,719
Number of Sequences: 53049
Number of extensions: 639384
Number of successful extensions: 2316
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2252
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2316
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3417159966
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)