Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P05_pT_B22
(749 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein. 31 0.012
EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein. 31 0.012
AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellif... 23 4.0
AY739658-1|AAU85297.1| 664|Apis mellifera hyperpolarization-act... 22 5.3
AY280848-1|AAQ16312.1| 632|Apis mellifera hyperpolarization-act... 22 5.3
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 22 5.3
DQ244074-1|ABB36784.1| 517|Apis mellifera cytochrome P450 monoo... 22 7.1
EF540769-1|ABQ14707.1| 620|Apis mellifera adenosine deaminase p... 21 9.3
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 21 9.3
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 21 9.3
>EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein.
Length = 684
Score = 31.1 bits (67), Expect = 0.012
Identities = 25/101 (24%), Positives = 43/101 (42%), Gaps = 3/101 (2%)
Frame = -3
Query: 459 QALKLDANVDSYNDRLAWGDSKDKTSHRVSWKLIPVWENNKLLYKIMNTEHTMYLKLDVN 280
QA ++AN+DSY + A + H ++P E L Y + E + KL +
Sbjct: 62 QAWNIEANIDSYTNAAAVKEFLSIYKH----GMLPRGELFSLYYPQLLREMSALFKLFYH 117
Query: 279 V---DGYGDRQAWGSNNSNEKRHLWKLTPVVLETGNVLLIE 166
D + W NN NE ++++ L V+ + I+
Sbjct: 118 AKDFDIFFKTALWAKNNINEAQYIYSLYTAVITRPDTKFIQ 158
>EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein.
Length = 684
Score = 31.1 bits (67), Expect = 0.012
Identities = 25/101 (24%), Positives = 43/101 (42%), Gaps = 3/101 (2%)
Frame = -3
Query: 459 QALKLDANVDSYNDRLAWGDSKDKTSHRVSWKLIPVWENNKLLYKIMNTEHTMYLKLDVN 280
QA ++AN+DSY + A + H ++P E L Y + E + KL +
Sbjct: 62 QAWNIEANIDSYTNAAAVKEFLSIYKH----GMLPRGELFSLYYPQLLREMSALFKLFYH 117
Query: 279 V---DGYGDRQAWGSNNSNEKRHLWKLTPVVLETGNVLLIE 166
D + W NN NE ++++ L V+ + I+
Sbjct: 118 AKDFDIFFKTALWAKNNINEAQYIYSLYTAVITRPDTKFIQ 158
>AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellifera
ORF for hypotheticalprotein. ).
Length = 998
Score = 22.6 bits (46), Expect = 4.0
Identities = 8/18 (44%), Positives = 9/18 (50%)
Frame = -3
Query: 255 AWGSNNSNEKRHLWKLTP 202
AW +N K LW L P
Sbjct: 88 AWAKHNPRGKDALWSLVP 105
>AY739658-1|AAU85297.1| 664|Apis mellifera
hyperpolarization-activated ion channelvariant L
protein.
Length = 664
Score = 22.2 bits (45), Expect = 5.3
Identities = 6/20 (30%), Positives = 14/20 (70%)
Frame = +1
Query: 496 LGDQFYFRREKVIDYIVVSG 555
+G + YF +E ++D ++ +G
Sbjct: 489 IGSKMYFIQEGIVDIVMANG 508
>AY280848-1|AAQ16312.1| 632|Apis mellifera
hyperpolarization-activated ion channel protein.
Length = 632
Score = 22.2 bits (45), Expect = 5.3
Identities = 6/20 (30%), Positives = 14/20 (70%)
Frame = +1
Query: 496 LGDQFYFRREKVIDYIVVSG 555
+G + YF +E ++D ++ +G
Sbjct: 457 IGSKMYFIQEGIVDIVMANG 476
>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
receptor protein.
Length = 1040
Score = 22.2 bits (45), Expect = 5.3
Identities = 7/22 (31%), Positives = 12/22 (54%)
Frame = +2
Query: 221 WRFSFELLEPHACLSPYPSTFT 286
W F+ P+A ++PY +T
Sbjct: 430 WEHHFQCRYPNASVTPYNKNYT 451
>DQ244074-1|ABB36784.1| 517|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 517
Score = 21.8 bits (44), Expect = 7.1
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = +3
Query: 87 VVSPVAGGRRSCPRAR 134
+V+P GRR CP R
Sbjct: 455 LVAPFGAGRRICPGKR 470
>EF540769-1|ABQ14707.1| 620|Apis mellifera adenosine deaminase
protein.
Length = 620
Score = 21.4 bits (43), Expect = 9.3
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = -2
Query: 133 RARGQLRRPPATGETT 86
RARGQLR +GE T
Sbjct: 394 RARGQLRTKIESGEGT 409
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 21.4 bits (43), Expect = 9.3
Identities = 8/17 (47%), Positives = 13/17 (76%)
Frame = -1
Query: 53 LGHQRVAGELHITTDSY 3
LGH++ A E+ +TT +Y
Sbjct: 191 LGHRQRAMEISLTTGNY 207
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 21.4 bits (43), Expect = 9.3
Identities = 8/17 (47%), Positives = 13/17 (76%)
Frame = -1
Query: 53 LGHQRVAGELHITTDSY 3
LGH++ A E+ +TT +Y
Sbjct: 130 LGHRQRAMEISLTTGNY 146
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 198,350
Number of Sequences: 438
Number of extensions: 4314
Number of successful extensions: 16
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23510295
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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