Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_pT_B19
         (804 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_02_0790 - 11212540-11212698,11212777-11212873,11212974-112130...    32   0.46 
12_01_0906 + 8799284-8799441,8800865-8801690,8801933-8802055,880...    29   4.3  
03_05_0065 + 20450814-20452748                                         29   4.3  
11_01_0319 - 2396835-2396951,2397035-2397105,2397219-2397297,239...    28   7.6  
08_01_0207 - 1647168-1647251,1647583-1647726,1648176-1648287,164...    28   10.0 

>03_02_0790 -
           11212540-11212698,11212777-11212873,11212974-11213030,
           11213291-11213379,11213463-11213549,11213820-11213935,
           11214026-11214281,11214361-11214510,11214948-11215106,
           11215456-11215493,11215972-11216063,11216528-11216682,
           11217185-11217253
          Length = 507

 Score = 32.3 bits (70), Expect = 0.46
 Identities = 17/52 (32%), Positives = 26/52 (50%)
 Frame = -1

Query: 549 DSDDTEFQNYGRDLIMFMYYLRILIRDXXVAVFITIPSHLYEDPIIMKKVLY 394
           +S D E  NY RD+ +F+Y+L I+     VA   +   H  +     K +LY
Sbjct: 111 ESIDVESNNYSRDMFLFLYFLLII-----VAAMTSFKVHQDKSSFTGKSILY 157


>12_01_0906 +
           8799284-8799441,8800865-8801690,8801933-8802055,
           8802144-8802210,8802611-8802714,8802798-8802900,
           8803103-8803401,8804009-8804263,8805471-8805776,
           8805866-8806194,8806829-8806916,8807027-8807164,
           8807438-8807458
          Length = 938

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 14/35 (40%), Positives = 18/35 (51%)
 Frame = -3

Query: 754 SKEXXPVWYYNLARQYFKLANDYAQREIKKCFVSQ 650
           S+E   + YY L  Q F + N   Q   +KCFV Q
Sbjct: 657 SQERTYLRYYGLLGQRFCMINKVYQENFEKCFVQQ 691


>03_05_0065 + 20450814-20452748
          Length = 644

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 15/26 (57%), Positives = 17/26 (65%)
 Frame = +3

Query: 267 MVRVYTAPLIL*CETVRGNLCRQGLF 344
           MVRV  AP I+   T+ G LCR GLF
Sbjct: 242 MVRVDCAPNIVTFNTLIGYLCRNGLF 267


>11_01_0319 -
           2396835-2396951,2397035-2397105,2397219-2397297,
           2397417-2397458,2397670-2397723,2397836-2397868,
           2397959-2398039,2398144-2398230,2398313-2398388,
           2398633-2398808,2398912-2399034,2399249-2399361,
           2399521-2399632,2400054-2400273,2401986-2402314,
           2402408-2402713,2403580-2403878,2404079-2404181,
           2404266-2404369,2404840-2404906,2404911-2405076,
           2405241-2405956
          Length = 1157

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 14/35 (40%), Positives = 18/35 (51%)
 Frame = -3

Query: 754 SKEXXPVWYYNLARQYFKLANDYAQREIKKCFVSQ 650
           S+E   + YY L  Q F + N   Q   +KCFV Q
Sbjct: 497 SQERTYLRYYGLLGQRFCMINKVYQDNFEKCFVQQ 531


>08_01_0207 -
           1647168-1647251,1647583-1647726,1648176-1648287,
           1648392-1648573,1648649-1648780,1648900-1649856,
           1649949-1650734
          Length = 798

 Score = 27.9 bits (59), Expect = 10.0
 Identities = 16/59 (27%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
 Frame = -1

Query: 462 VAVFITIPSHLYEDPIIMKKVLYSAHNAVRIESFAGS-EKETNPVYKDYHGLFHITKLT 289
           VA+ +     L +DP +   +L +   A R+  FAG  + ET   +++   L H+   T
Sbjct: 739 VAMELQYMGPLNKDPALEYMLLQAVRFAFRMHQFAGGFDPETMDAFEELRNLVHVRNST 797


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,160,061
Number of Sequences: 37544
Number of extensions: 365468
Number of successful extensions: 766
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 750
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 766
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2185924824
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)