Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P05_pT_B19
(804 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z83307-6|CAM13056.1| 424|Homo sapiens elongation protein 4 homo... 131 2e-30
AK000505-1|BAA91212.1| 424|Homo sapiens protein ( Homo sapiens ... 131 2e-30
Z83307-7|CAM13057.1| 531|Homo sapiens elongation protein 4 homo... 113 9e-25
Z83001-1|CAM28371.1| 531|Homo sapiens elongation protein 4 homo... 113 9e-25
BC012514-1|AAH12514.1| 535|Homo sapiens ELP4 protein protein. 113 9e-25
>Z83307-6|CAM13056.1| 424|Homo sapiens elongation protein 4 homolog
(S. cerevisiae) protein.
Length = 424
Score = 131 bits (317), Expect = 2e-30
Identities = 84/219 (38%), Positives = 116/219 (52%), Gaps = 7/219 (3%)
Frame = -1
Query: 801 FGHNFDLSRYIDADTIAKSXIQ-YGTTTWQDSTLSWQT-TMRRGKLKSALFHKLXRXIYE 628
FGH +D S+ + + I S + STL + ++ G K F + IYE
Sbjct: 180 FGHYYDASKRMPQELIEASNWHGFFLPEKISSTLKVEPCSLTPGYTKLLQF--IQNIIYE 237
Query: 627 TVLXSSGT-----NMLRLAIHSLGSPIWMAMDSDDTEFQNYGRDLIMFMYYLRILIRDXX 463
S N+LR+ I +LGSP+W D E L F+Y LR L+R
Sbjct: 238 EGFDGSNPQKKQRNILRIGIQNLGSPLW-GDDICCAENGGNSHSLTKFLYVLRGLLRTSL 296
Query: 462 VAVFITIPSHLYEDPIIMKKVLYSAHNAVRIESFAGSEKETNPVYKDYHGLFHITKLTAL 283
A IT+P+HL ++ I+ +V + V +ESF GSE+ETNP+YKDYHGL HI ++ L
Sbjct: 297 SACIITMPTHLIQNKAIIARVTTLSDVVVGLESFIGSERETNPLYKDYHGLIHIRQIPRL 356
Query: 282 YTLVPFVPPSLDLAFKLKRKKFVIEKLHIPPELEETSER 166
L+ DLAFKLKRK F IE+LH+PP+L +T R
Sbjct: 357 NNLICDESDVKDLAFKLKRKLFTIERLHLPPDLSDTVSR 395
>AK000505-1|BAA91212.1| 424|Homo sapiens protein ( Homo sapiens
cDNA FLJ20498 fis, clone KAT08960. ).
Length = 424
Score = 131 bits (317), Expect = 2e-30
Identities = 84/219 (38%), Positives = 116/219 (52%), Gaps = 7/219 (3%)
Frame = -1
Query: 801 FGHNFDLSRYIDADTIAKSXIQ-YGTTTWQDSTLSWQT-TMRRGKLKSALFHKLXRXIYE 628
FGH +D S+ + + I S + STL + ++ G K F + IYE
Sbjct: 180 FGHYYDASKRMPQELIEASNWHGFFLPEKISSTLKVEPCSLTPGYTKLLQF--IQNIIYE 237
Query: 627 TVLXSSGT-----NMLRLAIHSLGSPIWMAMDSDDTEFQNYGRDLIMFMYYLRILIRDXX 463
S N+LR+ I +LGSP+W D E L F+Y LR L+R
Sbjct: 238 EGFDGSNPQKKQRNILRIGIQNLGSPLW-GDDICCAENGGNSHSLTKFLYVLRGLLRTSL 296
Query: 462 VAVFITIPSHLYEDPIIMKKVLYSAHNAVRIESFAGSEKETNPVYKDYHGLFHITKLTAL 283
A IT+P+HL ++ I+ +V + V +ESF GSE+ETNP+YKDYHGL HI ++ L
Sbjct: 297 SACIITMPTHLIQNKAIIARVTTLSDVVVGLESFIGSERETNPLYKDYHGLIHIRQIPRL 356
Query: 282 YTLVPFVPPSLDLAFKLKRKKFVIEKLHIPPELEETSER 166
L+ DLAFKLKRK F IE+LH+PP+L +T R
Sbjct: 357 NNLICDESDVKDLAFKLKRKLFTIERLHLPPDLSDTVSR 395
>Z83307-7|CAM13057.1| 531|Homo sapiens elongation protein 4 homolog
(S. cerevisiae) protein.
Length = 531
Score = 113 bits (271), Expect = 9e-25
Identities = 77/205 (37%), Positives = 105/205 (51%), Gaps = 7/205 (3%)
Frame = -1
Query: 801 FGHNFDLSRYIDADTIAKSXIQ-YGTTTWQDSTLSWQT-TMRRGKLKSALFHKLXRXIYE 628
FGH +D S+ + + I S + STL + ++ G K F + IYE
Sbjct: 180 FGHYYDASKRMPQELIEASNWHGFFLPEKISSTLKVEPCSLTPGYTKLLQF--IQNIIYE 237
Query: 627 TVLXSSGT-----NMLRLAIHSLGSPIWMAMDSDDTEFQNYGRDLIMFMYYLRILIRDXX 463
S N+LR+ I +LGSP+W D E L F+Y LR L+R
Sbjct: 238 EGFDGSNPQKKQRNILRIGIQNLGSPLW-GDDICCAENGGNSHSLTKFLYVLRGLLRTSL 296
Query: 462 VAVFITIPSHLYEDPIIMKKVLYSAHNAVRIESFAGSEKETNPVYKDYHGLFHITKLTAL 283
A IT+P+HL ++ I+ +V + V +ESF GSE+ETNP+YKDYHGL HI ++ L
Sbjct: 297 SACIITMPTHLIQNKAIIARVTTLSDVVVGLESFIGSERETNPLYKDYHGLIHIRQIPRL 356
Query: 282 YTLVPFVPPSLDLAFKLKRKKFVIE 208
L+ DLAFKLKRK F IE
Sbjct: 357 NNLICDESDVKDLAFKLKRKLFTIE 381
>Z83001-1|CAM28371.1| 531|Homo sapiens elongation protein 4 homolog
(S. cerevisiae) protein.
Length = 531
Score = 113 bits (271), Expect = 9e-25
Identities = 77/205 (37%), Positives = 105/205 (51%), Gaps = 7/205 (3%)
Frame = -1
Query: 801 FGHNFDLSRYIDADTIAKSXIQ-YGTTTWQDSTLSWQT-TMRRGKLKSALFHKLXRXIYE 628
FGH +D S+ + + I S + STL + ++ G K F + IYE
Sbjct: 180 FGHYYDASKRMPQELIEASNWHGFFLPEKISSTLKVEPCSLTPGYTKLLQF--IQNIIYE 237
Query: 627 TVLXSSGT-----NMLRLAIHSLGSPIWMAMDSDDTEFQNYGRDLIMFMYYLRILIRDXX 463
S N+LR+ I +LGSP+W D E L F+Y LR L+R
Sbjct: 238 EGFDGSNPQKKQRNILRIGIQNLGSPLW-GDDICCAENGGNSHSLTKFLYVLRGLLRTSL 296
Query: 462 VAVFITIPSHLYEDPIIMKKVLYSAHNAVRIESFAGSEKETNPVYKDYHGLFHITKLTAL 283
A IT+P+HL ++ I+ +V + V +ESF GSE+ETNP+YKDYHGL HI ++ L
Sbjct: 297 SACIITMPTHLIQNKAIIARVTTLSDVVVGLESFIGSERETNPLYKDYHGLIHIRQIPRL 356
Query: 282 YTLVPFVPPSLDLAFKLKRKKFVIE 208
L+ DLAFKLKRK F IE
Sbjct: 357 NNLICDESDVKDLAFKLKRKLFTIE 381
>BC012514-1|AAH12514.1| 535|Homo sapiens ELP4 protein protein.
Length = 535
Score = 113 bits (271), Expect = 9e-25
Identities = 77/205 (37%), Positives = 105/205 (51%), Gaps = 7/205 (3%)
Frame = -1
Query: 801 FGHNFDLSRYIDADTIAKSXIQ-YGTTTWQDSTLSWQT-TMRRGKLKSALFHKLXRXIYE 628
FGH +D S+ + + I S + STL + ++ G K F + IYE
Sbjct: 180 FGHYYDASKRMPQELIEASNWHGFFLPEKISSTLKVEPCSLTPGYTKLLQF--IQNIIYE 237
Query: 627 TVLXSSGT-----NMLRLAIHSLGSPIWMAMDSDDTEFQNYGRDLIMFMYYLRILIRDXX 463
S N+LR+ I +LGSP+W D E L F+Y LR L+R
Sbjct: 238 EGFDGSNPQKKQRNILRIGIQNLGSPLW-GDDICCAENGGNSHSLTKFLYVLRGLLRTSL 296
Query: 462 VAVFITIPSHLYEDPIIMKKVLYSAHNAVRIESFAGSEKETNPVYKDYHGLFHITKLTAL 283
A IT+P+HL ++ I+ +V + V +ESF GSE+ETNP+YKDYHGL HI ++ L
Sbjct: 297 SACIITMPTHLIQNKAIIARVTTLSDVVVGLESFIGSERETNPLYKDYHGLIHIRQIPRL 356
Query: 282 YTLVPFVPPSLDLAFKLKRKKFVIE 208
L+ DLAFKLKRK F IE
Sbjct: 357 NNLICDESDVKDLAFKLKRKLFTIE 381
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,055,311
Number of Sequences: 237096
Number of extensions: 2098671
Number of successful extensions: 10927
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 10850
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10922
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9924838204
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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