Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P05_pT_B18
(604 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z19152-1|CAA79536.1| 531|Caenorhabditis elegans Hypothetical pr... 274 2e-74
Z71262-12|CAA95808.1| 545|Caenorhabditis elegans Hypothetical p... 54 6e-08
AL161712-18|CAC70140.1| 448|Caenorhabditis elegans Hypothetical... 45 4e-05
Z81497-3|CAB04081.2| 593|Caenorhabditis elegans Hypothetical pr... 40 0.001
U41105-3|AAX88810.1| 514|Caenorhabditis elegans Lysyl (k) trna ... 36 0.022
U41105-2|AAK68395.1| 596|Caenorhabditis elegans Lysyl (k) trna ... 36 0.022
U41105-1|AAA82396.1| 572|Caenorhabditis elegans Lysyl (k) trna ... 36 0.022
Z99281-48|CAE18025.2| 661|Caenorhabditis elegans Hypothetical p... 31 0.84
AC024859-11|AAK29981.1| 933|Caenorhabditis elegans Hypothetical... 30 1.1
AC024859-10|ABA00158.1| 832|Caenorhabditis elegans Hypothetical... 30 1.1
Z47812-12|CAE48507.1| 719|Caenorhabditis elegans Hypothetical p... 30 1.5
Z47812-11|CAA87796.1| 796|Caenorhabditis elegans Hypothetical p... 30 1.5
Z47811-6|CAE48505.1| 719|Caenorhabditis elegans Hypothetical pr... 30 1.5
Z47811-5|CAA87788.1| 796|Caenorhabditis elegans Hypothetical pr... 30 1.5
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 29 1.9
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 29 1.9
AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical ... 29 1.9
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 29 1.9
Z83114-1|CAB63234.1| 549|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z81522-9|CAB61005.2| 3674|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z81063-9|CAB61012.2| 3674|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z78064-2|CAB01508.2| 317|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z74037-4|CAA98490.1| 295|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z54237-5|CAN86900.1| 273|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z54237-4|CAN86899.1| 297|Caenorhabditis elegans Hypothetical pr... 29 2.6
AJ012469-1|CAA10033.1| 3674|Caenorhabditis elegans DYS-1 protein... 29 2.6
Z79694-6|CAB01958.1| 316|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z79694-5|CAB01961.1| 316|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z78064-1|CAB01509.1| 313|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z77132-3|CAB00860.1| 310|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z77132-2|CAB00858.1| 294|Caenorhabditis elegans Hypothetical pr... 29 3.4
U61952-9|AAB03165.1| 1321|Caenorhabditis elegans Temporarily ass... 29 3.4
U61952-8|AAB03166.1| 1372|Caenorhabditis elegans Temporarily ass... 29 3.4
U64847-1|AAN84827.1| 358|Caenorhabditis elegans Hypothetical pr... 28 4.5
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 28 4.5
AF099921-1|AAC68807.1| 1286|Caenorhabditis elegans Hypothetical ... 28 4.5
AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical ... 28 4.5
Z74042-8|CAA98525.1| 299|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z68219-3|CAA92480.2| 747|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z68106-9|CAE17838.1| 551|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z67738-4|CAJ43444.1| 279|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z67738-3|CAA91544.2| 332|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z49207-10|CAE17907.1| 551|Caenorhabditis elegans Hypothetical p... 28 5.9
U97194-8|AAB52447.3| 1254|Caenorhabditis elegans Prion-like-(q/n... 28 5.9
AL132943-5|CAB81977.1| 367|Caenorhabditis elegans Hypothetical ... 28 5.9
AL032637-5|CAA21609.1| 245|Caenorhabditis elegans Hypothetical ... 28 5.9
AL032635-1|CAA21600.1| 382|Caenorhabditis elegans Hypothetical ... 28 5.9
Z73972-2|CAA98258.1| 316|Caenorhabditis elegans Hypothetical pr... 27 7.8
Z73972-1|CAA98257.1| 316|Caenorhabditis elegans Hypothetical pr... 27 7.8
X51623-1|CAA35955.1| 316|Caenorhabditis elegans collagen protein. 27 7.8
X51622-1|CAA35954.1| 316|Caenorhabditis elegans collagen protein. 27 7.8
U80451-8|AAB37842.2| 288|Caenorhabditis elegans Collagen protei... 27 7.8
U23448-8|AAL27226.1| 849|Caenorhabditis elegans Dnaj domain (pr... 27 7.8
U23448-7|AAM81128.1| 868|Caenorhabditis elegans Dnaj domain (pr... 27 7.8
U23448-6|AAL27225.1| 915|Caenorhabditis elegans Dnaj domain (pr... 27 7.8
U23448-5|AAL27227.1| 912|Caenorhabditis elegans Dnaj domain (pr... 27 7.8
M80650-1|AAA27985.1| 298|Caenorhabditis elegans alpha-collagen ... 27 7.8
AL021448-3|CAA16275.1| 291|Caenorhabditis elegans Hypothetical ... 27 7.8
>Z19152-1|CAA79536.1| 531|Caenorhabditis elegans Hypothetical
protein B0464.1 protein.
Length = 531
Score = 274 bits (673), Expect = 2e-74
Identities = 122/194 (62%), Positives = 152/194 (78%)
Frame = -3
Query: 602 DTIGGTFTEMFRGXRDQFASEIATVGQQYRVEPFKFLDPPLKLEFPQAVQMLKEAGVSVG 423
+TI T+MF+G + + EIA VG QY EPF+F +PPL L++P A+ +L+E G+ +G
Sbjct: 334 ETIAEVLTQMFKGLQQNYQDEIAAVGNQYPAEPFQFCEPPLILKYPDAITLLRENGIEIG 393
Query: 422 DEDDLSTPDEKLLGRLVRAKYDTDFYILDKYPLAVRPFYTMPDPGNPKYSNSYDMFMRGE 243
DEDDLSTP EK LG+LV+ KY TDFY+LDK+PL+VRPFYTMPD + +YSNSYDMFMRGE
Sbjct: 394 DEDDLSTPVEKFLGKLVKEKYSTDFYVLDKFPLSVRPFYTMPDAHDERYSNSYDMFMRGE 453
Query: 242 EILSGAQRIHDPDLLAERARLHGVDTSKIAAYIESFRLGCPPHAGGGIGLERVVMLYLGL 63
EILSGAQRIHD D+L ERA+ H VD +KI +YI+SF+ GCPPHAGGGIGLERV ML+LGL
Sbjct: 454 EILSGAQRIHDADMLVERAKHHQVDLAKIQSYIDSFKYGCPPHAGGGIGLERVTMLFLGL 513
Query: 62 DNIKKDLNVPERPE 21
NI+ P P+
Sbjct: 514 HNIRLASLFPRDPK 527
Score = 28.7 bits (61), Expect = 3.4
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = -1
Query: 52 RKTSMFPRDPKRXTP 8
R S+FPRDPKR TP
Sbjct: 517 RLASLFPRDPKRLTP 531
>Z71262-12|CAA95808.1| 545|Caenorhabditis elegans Hypothetical
protein F22D6.3a protein.
Length = 545
Score = 54.4 bits (125), Expect = 6e-08
Identities = 39/165 (23%), Positives = 72/165 (43%), Gaps = 1/165 (0%)
Frame = -3
Query: 542 EIATVGQQYRVEPFKFLDPPLKLEFPQAVQMLKEAGVSVGDEDDLSTPDEKLLGRLVRAK 363
E G + PFK + +E+ Q + E G +D++ E+ + +
Sbjct: 372 EFVNPGYKAPARPFKRMPYKEAIEWLQKNDVRNEMGEKFVYGEDIAEAAERRMTDTIGVP 431
Query: 362 YDTDFYILDKYPLAVRPFYTMPDPGNPKYSNSYDMFMRGE-EILSGAQRIHDPDLLAERA 186
+L+++P ++ FY + + + S D+ M G EI+ G+ RI D L
Sbjct: 432 I-----LLNRFPHGIKAFYMPRCADDNELTESVDLLMPGVGEIVGGSMRIWKEDQLLAAF 486
Query: 185 RLHGVDTSKIAAYIESFRLGCPPHAGGGIGLERVVMLYLGLDNIK 51
G+D+ Y++ + G PH G G+GLER + ++I+
Sbjct: 487 EKGGLDSKNYYWYMDQRKYGSVPHGGYGLGLERFICWLTDTNHIR 531
>AL161712-18|CAC70140.1| 448|Caenorhabditis elegans Hypothetical
protein Y66D12A.23 protein.
Length = 448
Score = 45.2 bits (102), Expect = 4e-05
Identities = 49/170 (28%), Positives = 78/170 (45%), Gaps = 1/170 (0%)
Frame = -3
Query: 542 EIATVGQQYRVEPFKFLDPPLKLEFPQAVQMLKEAGVSVGDEDDLSTPDEKLLGRLVRAK 363
E A +G + + KF P ++ + +AV +L G V + S +E L +L
Sbjct: 258 ETAIIGSKIPISNIKF---P-RIRYDEAVHLLALKGSKVTAKSGFSKKNELDLVKL---- 309
Query: 362 YDTDFYILDKYPLAVRPFYTMPDPGNPKYSNSYDMFMRG-EEILSGAQRIHDPDLLAERA 186
+D + YP+ +PFY D + + S+D+ + G E+ G+ R + L R
Sbjct: 310 HDDHPIFVTHYPVGQKPFYMARDG---QLTLSFDLLVPGIGELAGGSLREQSAEELQRRG 366
Query: 185 RLHGVDTSKIAAYIESFRLGCPPHAGGGIGLERVVMLYLGLDNIKKDLNV 36
G+D Y+E R G PP G GIG ER++ YL +K LN+
Sbjct: 367 C--GIDW-----YLEMRRRGQPPTGGFGIGFERMLQ-YLIF--FRKSLNL 406
>Z81497-3|CAB04081.2| 593|Caenorhabditis elegans Hypothetical
protein F10C2.6 protein.
Length = 593
Score = 40.3 bits (90), Expect = 0.001
Identities = 18/64 (28%), Positives = 34/64 (53%)
Frame = -3
Query: 266 YDMFMRGEEILSGAQRIHDPDLLAERARLHGVDTSKIAAYIESFRLGCPPHAGGGIGLER 87
YD+ + G E+ G+ RI + ++ ++ G T ++ + + G PPH G +GL+R
Sbjct: 478 YDLVINGVEMGGGSIRIENSEIQRHVLKVLGEPTDEMEHLLNALSHGAPPHGGFALGLDR 537
Query: 86 VVML 75
V +
Sbjct: 538 FVAM 541
>U41105-3|AAX88810.1| 514|Caenorhabditis elegans Lysyl (k) trna
synthetase protein1, isoform c protein.
Length = 514
Score = 35.9 bits (79), Expect = 0.022
Identities = 30/134 (22%), Positives = 61/134 (45%), Gaps = 9/134 (6%)
Frame = -3
Query: 395 EKLLGRLVRAKYDTDFYILDKYPLAVRPFYTMPDPGNPKYSNSYDMFMRGEEILSGAQRI 216
+KL+G + + + + +++ +P + P P + +++F EI + +
Sbjct: 367 DKLVGEYLESTFISPTFLIG-HPQIMSPLAKW-HRSIPGLTERFELFAVTREIANAYTEL 424
Query: 215 HDPDLLAERARLH------GVDTSKIA--AYIESFRLGCPPHAGGGIGLERVVMLYLGLD 60
+DP +R G D +++ + + G PP G G+G++R+ M+ +
Sbjct: 425 NDPITQRQRFEQQAKDKDAGDDEAQMIDETFCNALEYGLPPTGGWGMGIDRLSMILTDNN 484
Query: 59 NIKKDLNVPE-RPE 21
NIK+ L P RPE
Sbjct: 485 NIKEVLLFPAMRPE 498
>U41105-2|AAK68395.1| 596|Caenorhabditis elegans Lysyl (k) trna
synthetase protein1, isoform b protein.
Length = 596
Score = 35.9 bits (79), Expect = 0.022
Identities = 30/134 (22%), Positives = 61/134 (45%), Gaps = 9/134 (6%)
Frame = -3
Query: 395 EKLLGRLVRAKYDTDFYILDKYPLAVRPFYTMPDPGNPKYSNSYDMFMRGEEILSGAQRI 216
+KL+G + + + + +++ +P + P P + +++F EI + +
Sbjct: 449 DKLVGEYLESTFISPTFLIG-HPQIMSPLAKW-HRSIPGLTERFELFAVTREIANAYTEL 506
Query: 215 HDPDLLAERARLH------GVDTSKIA--AYIESFRLGCPPHAGGGIGLERVVMLYLGLD 60
+DP +R G D +++ + + G PP G G+G++R+ M+ +
Sbjct: 507 NDPITQRQRFEQQAKDKDAGDDEAQMIDETFCNALEYGLPPTGGWGMGIDRLSMILTDNN 566
Query: 59 NIKKDLNVPE-RPE 21
NIK+ L P RPE
Sbjct: 567 NIKEVLLFPAMRPE 580
>U41105-1|AAA82396.1| 572|Caenorhabditis elegans Lysyl (k) trna
synthetase protein1, isoform a protein.
Length = 572
Score = 35.9 bits (79), Expect = 0.022
Identities = 30/134 (22%), Positives = 61/134 (45%), Gaps = 9/134 (6%)
Frame = -3
Query: 395 EKLLGRLVRAKYDTDFYILDKYPLAVRPFYTMPDPGNPKYSNSYDMFMRGEEILSGAQRI 216
+KL+G + + + + +++ +P + P P + +++F EI + +
Sbjct: 425 DKLVGEYLESTFISPTFLIG-HPQIMSPLAKW-HRSIPGLTERFELFAVTREIANAYTEL 482
Query: 215 HDPDLLAERARLH------GVDTSKIA--AYIESFRLGCPPHAGGGIGLERVVMLYLGLD 60
+DP +R G D +++ + + G PP G G+G++R+ M+ +
Sbjct: 483 NDPITQRQRFEQQAKDKDAGDDEAQMIDETFCNALEYGLPPTGGWGMGIDRLSMILTDNN 542
Query: 59 NIKKDLNVPE-RPE 21
NIK+ L P RPE
Sbjct: 543 NIKEVLLFPAMRPE 556
>Z99281-48|CAE18025.2| 661|Caenorhabditis elegans Hypothetical
protein Y57G11C.42 protein.
Length = 661
Score = 30.7 bits (66), Expect = 0.84
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = -3
Query: 314 PFYTMPDPGNPKYSNSYDMFMRGEEILSGA 225
P T P P +P SNS D+F R + +SGA
Sbjct: 246 PQQTPPPPASPLISNSGDVFARSRKEISGA 275
>AC024859-11|AAK29981.1| 933|Caenorhabditis elegans Hypothetical
protein Y71H2AM.15a protein.
Length = 933
Score = 30.3 bits (65), Expect = 1.1
Identities = 14/29 (48%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = +1
Query: 58 LSRPRYSITTRSRPIPPPA-CGGQPSRND 141
L +PR+ +TTR R PPA G PS+N+
Sbjct: 39 LRQPRHPLTTRGRSATPPATLHGHPSQNN 67
>AC024859-10|ABA00158.1| 832|Caenorhabditis elegans Hypothetical
protein Y71H2AM.15b protein.
Length = 832
Score = 30.3 bits (65), Expect = 1.1
Identities = 14/29 (48%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = +1
Query: 58 LSRPRYSITTRSRPIPPPA-CGGQPSRND 141
L +PR+ +TTR R PPA G PS+N+
Sbjct: 39 LRQPRHPLTTRGRSATPPATLHGHPSQNN 67
>Z47812-12|CAE48507.1| 719|Caenorhabditis elegans Hypothetical
protein T05H10.7b protein.
Length = 719
Score = 29.9 bits (64), Expect = 1.5
Identities = 17/51 (33%), Positives = 26/51 (50%)
Frame = -3
Query: 476 LEFPQAVQMLKEAGVSVGDEDDLSTPDEKLLGRLVRAKYDTDFYILDKYPL 324
L FPQ + +K+ V G+E++ P LL L + D F + KYP+
Sbjct: 430 LSFPQKKENVKKL-VEAGEEEEDFKPFPTLLEALTKVDPDVGFNVEVKYPM 479
>Z47812-11|CAA87796.1| 796|Caenorhabditis elegans Hypothetical
protein T05H10.7a protein.
Length = 796
Score = 29.9 bits (64), Expect = 1.5
Identities = 17/51 (33%), Positives = 26/51 (50%)
Frame = -3
Query: 476 LEFPQAVQMLKEAGVSVGDEDDLSTPDEKLLGRLVRAKYDTDFYILDKYPL 324
L FPQ + +K+ V G+E++ P LL L + D F + KYP+
Sbjct: 507 LSFPQKKENVKKL-VEAGEEEEDFKPFPTLLEALTKVDPDVGFNVEVKYPM 556
>Z47811-6|CAE48505.1| 719|Caenorhabditis elegans Hypothetical
protein T05H10.7b protein.
Length = 719
Score = 29.9 bits (64), Expect = 1.5
Identities = 17/51 (33%), Positives = 26/51 (50%)
Frame = -3
Query: 476 LEFPQAVQMLKEAGVSVGDEDDLSTPDEKLLGRLVRAKYDTDFYILDKYPL 324
L FPQ + +K+ V G+E++ P LL L + D F + KYP+
Sbjct: 430 LSFPQKKENVKKL-VEAGEEEEDFKPFPTLLEALTKVDPDVGFNVEVKYPM 479
>Z47811-5|CAA87788.1| 796|Caenorhabditis elegans Hypothetical
protein T05H10.7a protein.
Length = 796
Score = 29.9 bits (64), Expect = 1.5
Identities = 17/51 (33%), Positives = 26/51 (50%)
Frame = -3
Query: 476 LEFPQAVQMLKEAGVSVGDEDDLSTPDEKLLGRLVRAKYDTDFYILDKYPL 324
L FPQ + +K+ V G+E++ P LL L + D F + KYP+
Sbjct: 507 LSFPQKKENVKKL-VEAGEEEEDFKPFPTLLEALTKVDPDVGFNVEVKYPM 556
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 29.5 bits (63), Expect = 1.9
Identities = 25/76 (32%), Positives = 29/76 (38%), Gaps = 1/76 (1%)
Frame = +2
Query: 368 PAPACPGASR-PEWTGRPRLQQTLQLPSASGRPAETPASGEDPRI*RVPPGTVDPQSLSR 544
P+ + G+S P TG P LP +G P P G P I PP P L
Sbjct: 696 PSTSAGGSSALPPITGGP--PPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPP 753
Query: 545 RQTGPLXPGTSP*MCP 592
GP P P CP
Sbjct: 754 ISGGPPPPPPPPGGCP 769
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 29.5 bits (63), Expect = 1.9
Identities = 25/76 (32%), Positives = 29/76 (38%), Gaps = 1/76 (1%)
Frame = +2
Query: 368 PAPACPGASR-PEWTGRPRLQQTLQLPSASGRPAETPASGEDPRI*RVPPGTVDPQSLSR 544
P+ + G+S P TG P LP +G P P G P I PP P L
Sbjct: 696 PSTSAGGSSALPPITGGP--PPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPP 753
Query: 545 RQTGPLXPGTSP*MCP 592
GP P P CP
Sbjct: 754 ISGGPPPPPPPPGGCP 769
>AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical
protein Y106G6H.2b protein.
Length = 583
Score = 29.5 bits (63), Expect = 1.9
Identities = 16/59 (27%), Positives = 26/59 (44%)
Frame = +2
Query: 368 PAPACPGASRPEWTGRPRLQQTLQLPSASGRPAETPASGEDPRI*RVPPGTVDPQSLSR 544
PA A GA+ P+ R T+ + G+P S DP + R G + ++L +
Sbjct: 8 PAAAVAGAAAPQPADAERAMDTMNFEALHGKPMRIMWSQRDPAMRRSGAGNIFIKNLDK 66
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 29.5 bits (63), Expect = 1.9
Identities = 25/76 (32%), Positives = 29/76 (38%), Gaps = 1/76 (1%)
Frame = +2
Query: 368 PAPACPGASR-PEWTGRPRLQQTLQLPSASGRPAETPASGEDPRI*RVPPGTVDPQSLSR 544
P+ + G+S P TG P LP +G P P G P I PP P L
Sbjct: 279 PSTSAGGSSALPPITGGP--PPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPP 336
Query: 545 RQTGPLXPGTSP*MCP 592
GP P P CP
Sbjct: 337 ISGGPPPPPPPPGGCP 352
>Z83114-1|CAB63234.1| 549|Caenorhabditis elegans Hypothetical
protein K09B11.2 protein.
Length = 549
Score = 29.1 bits (62), Expect = 2.6
Identities = 18/57 (31%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Frame = -3
Query: 359 DTDFYILDKYPLAVRPFYTMPDPGNPKYSNSYDMFM-RGEEILSGAQRIHDPDLLAE 192
D + Y +D + F + +PG+ NS G EIL G R+ DP+L E
Sbjct: 267 DINLY-MDIFERLFNKFKVISEPGSVCIINSMGWVTDEGAEILDGITRVTDPELFVE 322
>Z81522-9|CAB61005.2| 3674|Caenorhabditis elegans Hypothetical protein
F15D3.1a protein.
Length = 3674
Score = 29.1 bits (62), Expect = 2.6
Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Frame = -3
Query: 557 DQFASEIATVGQQY--RVEPFKFLDPPLKLEFPQAVQMLKEAGVSVGDEDDLSTPDE 393
D SE TVGQ+ +V+P + L+P +E V+ LK+ ++ + PDE
Sbjct: 1848 DSVISEAVTVGQKSVDQVDPVEQLEPVEPVEPKLEVKQLKDEATEEEEKRTIILPDE 1904
>Z81063-9|CAB61012.2| 3674|Caenorhabditis elegans Hypothetical protein
F15D3.1a protein.
Length = 3674
Score = 29.1 bits (62), Expect = 2.6
Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Frame = -3
Query: 557 DQFASEIATVGQQY--RVEPFKFLDPPLKLEFPQAVQMLKEAGVSVGDEDDLSTPDE 393
D SE TVGQ+ +V+P + L+P +E V+ LK+ ++ + PDE
Sbjct: 1848 DSVISEAVTVGQKSVDQVDPVEQLEPVEPVEPKLEVKQLKDEATEEEEKRTIILPDE 1904
>Z78064-2|CAB01508.2| 317|Caenorhabditis elegans Hypothetical
protein F57B1.4 protein.
Length = 317
Score = 29.1 bits (62), Expect = 2.6
Identities = 15/40 (37%), Positives = 18/40 (45%)
Frame = +2
Query: 371 APACPGASRPEWTGRPRLQQTLQLPSASGRPAETPASGED 490
AP PG S G P Q P A G+P + A G+D
Sbjct: 257 APGQPGQSGSAQPGGPGPQGDAGAPGAPGQPGQAGAPGQD 296
>Z74037-4|CAA98490.1| 295|Caenorhabditis elegans Hypothetical
protein F57B7.3 protein.
Length = 295
Score = 29.1 bits (62), Expect = 2.6
Identities = 23/69 (33%), Positives = 27/69 (39%), Gaps = 2/69 (2%)
Frame = -2
Query: 570 PGXKGPVCLRDSDCGSTVPGGTLQILGSSPEAGVSA--GRPDAEGSWSVCWRRGRPVHSG 397
PG GP D S PG + G +AG G+ +G RRGR
Sbjct: 149 PGAPGPSGQPGQDGASGQPGAP-GVAGPQGDAGTPGQPGQQGQDGRPGQNGRRGRGTPGA 207
Query: 396 REAPGQAGA 370
APG AGA
Sbjct: 208 PGAPGAAGA 216
>Z54237-5|CAN86900.1| 273|Caenorhabditis elegans Hypothetical
protein T11B7.3b protein.
Length = 273
Score = 29.1 bits (62), Expect = 2.6
Identities = 24/68 (35%), Positives = 26/68 (38%), Gaps = 2/68 (2%)
Frame = -2
Query: 570 PGXKGPVCLRDSDCGSTVPGGTLQILGSS--PEAGVSAGRPDAEGSWSVCWRRGRPVHSG 397
PG G V R D S PG QI G P AG P A G + G P H G
Sbjct: 150 PGDVGSVGQRGPDGASGAPGAASQIHGKPGLPGPPGDAGAPGAPG------QDGAPGHPG 203
Query: 396 REAPGQAG 373
+ Q G
Sbjct: 204 ADGQRQRG 211
>Z54237-4|CAN86899.1| 297|Caenorhabditis elegans Hypothetical
protein T11B7.3a protein.
Length = 297
Score = 29.1 bits (62), Expect = 2.6
Identities = 24/68 (35%), Positives = 26/68 (38%), Gaps = 2/68 (2%)
Frame = -2
Query: 570 PGXKGPVCLRDSDCGSTVPGGTLQILGSS--PEAGVSAGRPDAEGSWSVCWRRGRPVHSG 397
PG G V R D S PG QI G P AG P A G + G P H G
Sbjct: 150 PGDVGSVGQRGPDGASGAPGAASQIHGKPGLPGPPGDAGAPGAPG------QDGAPGHPG 203
Query: 396 REAPGQAG 373
+ Q G
Sbjct: 204 ADGQRQRG 211
>AJ012469-1|CAA10033.1| 3674|Caenorhabditis elegans DYS-1 protein
protein.
Length = 3674
Score = 29.1 bits (62), Expect = 2.6
Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Frame = -3
Query: 557 DQFASEIATVGQQY--RVEPFKFLDPPLKLEFPQAVQMLKEAGVSVGDEDDLSTPDE 393
D SE TVGQ+ +V+P + L+P +E V+ LK+ ++ + PDE
Sbjct: 1848 DSVISEAVTVGQKSVDQVDPVEQLEPVEPVEPKLEVKQLKDEATEEEEKRTIILPDE 1904
>Z79694-6|CAB01958.1| 316|Caenorhabditis elegans Hypothetical
protein C15A11.6 protein.
Length = 316
Score = 28.7 bits (61), Expect = 3.4
Identities = 27/82 (32%), Positives = 34/82 (41%)
Frame = -2
Query: 570 PGXKGPVCLRDSDCGSTVPGGTLQILGSSPEAGVSAGRPDAEGSWSVCWRRGRPVHSGRE 391
PG KGP + + G+ GG G AG SAG P G+ G+ GR
Sbjct: 150 PGPKGP----NGNPGAPAQGGGQGPPGPPGPAG-SAGSPGQAGAPGNPGSPGKSGQRGRG 204
Query: 390 APGQAGAGQVRHGLLYPGQISS 325
PG +GA + PGQ S
Sbjct: 205 LPGPSGAPGSQGPPGAPGQPGS 226
>Z79694-5|CAB01961.1| 316|Caenorhabditis elegans Hypothetical
protein C15A11.5 protein.
Length = 316
Score = 28.7 bits (61), Expect = 3.4
Identities = 27/82 (32%), Positives = 34/82 (41%)
Frame = -2
Query: 570 PGXKGPVCLRDSDCGSTVPGGTLQILGSSPEAGVSAGRPDAEGSWSVCWRRGRPVHSGRE 391
PG KGP + + G+ GG G AG SAG P G+ G+ GR
Sbjct: 150 PGPKGP----NGNPGAPAQGGGQGPPGPPGPAG-SAGSPGQAGAPGNPGSPGKSGQRGRG 204
Query: 390 APGQAGAGQVRHGLLYPGQISS 325
PG +GA + PGQ S
Sbjct: 205 LPGPSGAPGPQGPPGAPGQPGS 226
>Z78064-1|CAB01509.1| 313|Caenorhabditis elegans Hypothetical
protein F57B1.3 protein.
Length = 313
Score = 28.7 bits (61), Expect = 3.4
Identities = 15/40 (37%), Positives = 18/40 (45%)
Frame = +2
Query: 371 APACPGASRPEWTGRPRLQQTLQLPSASGRPAETPASGED 490
AP PG S G P Q P A G+P + A G+D
Sbjct: 253 APGQPGQSGSGQPGGPGPQGDAGAPGAPGQPGQAGAPGQD 292
>Z77132-3|CAB00860.1| 310|Caenorhabditis elegans Hypothetical
protein F54D1.3 protein.
Length = 310
Score = 28.7 bits (61), Expect = 3.4
Identities = 21/78 (26%), Positives = 25/78 (32%)
Frame = +2
Query: 296 PAWCRRVGRREDICPGYRSPCRTWPAPACPGASRPEWTGRPRLQQTLQLPSASGRPAETP 475
PAWC+ + PG P AP PGA P + P S + P
Sbjct: 105 PAWCQCEPTKPTCPPGPPGPPGQPGAPGVPGAPGPRGGDSTVTYAPINCPQVSFDCIKCP 164
Query: 476 ASGEDPRI*RVPPGTVDP 529
A P P G P
Sbjct: 165 AGPAGPAGSSGPAGPAGP 182
>Z77132-2|CAB00858.1| 294|Caenorhabditis elegans Hypothetical
protein F54D1.2 protein.
Length = 294
Score = 28.7 bits (61), Expect = 3.4
Identities = 21/78 (26%), Positives = 25/78 (32%)
Frame = +2
Query: 296 PAWCRRVGRREDICPGYRSPCRTWPAPACPGASRPEWTGRPRLQQTLQLPSASGRPAETP 475
PAWC+ + PG P AP PGA P + P S + P
Sbjct: 89 PAWCQCEPTKPTCPPGPPGPPGQPGAPGVPGAPGPRGGDSTVTYAPINCPQVSFDCIKCP 148
Query: 476 ASGEDPRI*RVPPGTVDP 529
A P P G P
Sbjct: 149 AGPAGPAGSSGPAGPAGP 166
>U61952-9|AAB03165.1| 1321|Caenorhabditis elegans Temporarily
assigned gene nameprotein 137, isoform b protein.
Length = 1321
Score = 28.7 bits (61), Expect = 3.4
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -3
Query: 449 LKEAGVSVGDEDDLSTPDEKLLGR 378
L+E+G GD+DD ST DE L R
Sbjct: 474 LEESGFEPGDDDDCSTGDEMLKKR 497
>U61952-8|AAB03166.1| 1372|Caenorhabditis elegans Temporarily
assigned gene nameprotein 137, isoform a protein.
Length = 1372
Score = 28.7 bits (61), Expect = 3.4
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -3
Query: 449 LKEAGVSVGDEDDLSTPDEKLLGR 378
L+E+G GD+DD ST DE L R
Sbjct: 474 LEESGFEPGDDDDCSTGDEMLKKR 497
>U64847-1|AAN84827.1| 358|Caenorhabditis elegans Hypothetical
protein F08F3.4 protein.
Length = 358
Score = 28.3 bits (60), Expect = 4.5
Identities = 16/49 (32%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
Frame = +2
Query: 329 DICPGYRSPCRTWPAPACPGASRPEWTGRPR--LQQTLQLPSASGRPAE 469
DICP +S +WP +R +W P L +T+Q+ A R E
Sbjct: 300 DICPTRQSIADSWPMSLDDSEARKDWGWNPEYGLDETVQVMFALLRREE 348
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 28.3 bits (60), Expect = 4.5
Identities = 18/55 (32%), Positives = 21/55 (38%), Gaps = 1/55 (1%)
Frame = +2
Query: 368 PAPACPGASR-PEWTGRPRLQQTLQLPSASGRPAETPASGEDPRI*RVPPGTVDP 529
P P P R P P + + PS RP TP S E R PP + P
Sbjct: 139 PPPPPPRVPRTPPPRSPPPRRPPMTPPSPQRRPPRTPPSPEPRNPPRTPPSPIPP 193
>AF099921-1|AAC68807.1| 1286|Caenorhabditis elegans Hypothetical
protein M01E10.2 protein.
Length = 1286
Score = 28.3 bits (60), Expect = 4.5
Identities = 16/42 (38%), Positives = 19/42 (45%)
Frame = -1
Query: 415 TTCPLRTRSSWAGWCGPSTTRTSISWTNILSPSDPSTPCRIP 290
TT RT+ +WA W P+TT T P P P R P
Sbjct: 389 TTQTPRTKQTWAPWTPPTTTTRQTPPTTQAPPITP-PPYRPP 429
>AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical
protein Y40C5A.3 protein.
Length = 2344
Score = 28.3 bits (60), Expect = 4.5
Identities = 23/70 (32%), Positives = 28/70 (40%)
Frame = +2
Query: 368 PAPACPGASRPEWTGRPRLQQTLQLPSASGRPAETPASGEDPRI*RVPPGTVDPQSLSRR 547
P P P TG + QQT P+ RP TP + P T+ P SL
Sbjct: 1436 PTVTVPSNIAPSTTGH-QSQQTRPTPTTH-RPGITPP---------LAPKTIYPSSLQTG 1484
Query: 548 QTGPLXPGTS 577
+ P PGTS
Sbjct: 1485 SSSPTPPGTS 1494
>Z74042-8|CAA98525.1| 299|Caenorhabditis elegans Hypothetical
protein T11F9.9 protein.
Length = 299
Score = 27.9 bits (59), Expect = 5.9
Identities = 21/67 (31%), Positives = 26/67 (38%), Gaps = 1/67 (1%)
Frame = -2
Query: 570 PGXKGPVCLRDSDCGSTVPGGTLQILGSSPEAGVSAGRPDAEGSWSVCWRRGRPVHSGRE 391
PG KGP + PG Q S P + G A G + G+P H G+
Sbjct: 183 PGNKGPSGQNGNPGAPGAPGQPGQDAPSEPITPGAPGPQGAPGPQGPPGQPGQPGHDGQP 242
Query: 390 -APGQAG 373
APG G
Sbjct: 243 GAPGPKG 249
>Z68219-3|CAA92480.2| 747|Caenorhabditis elegans Hypothetical
protein T05A1.3 protein.
Length = 747
Score = 27.9 bits (59), Expect = 5.9
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +3
Query: 435 SSFLQHLDGLRKLQLQGRIQEF 500
S+ L HLDGL+K++L G F
Sbjct: 520 STSLNHLDGLKKIRLGGNFSRF 541
>Z68106-9|CAE17838.1| 551|Caenorhabditis elegans Hypothetical
protein F41E7.9 protein.
Length = 551
Score = 27.9 bits (59), Expect = 5.9
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = +2
Query: 395 RPEWTGRPRLQQTLQLPSASGRPAETPAS 481
+P W RP +Q+ +P+ G+P P S
Sbjct: 467 KPSWQDRPADRQSAVIPTLRGKPPAVPDS 495
>Z67738-4|CAJ43444.1| 279|Caenorhabditis elegans Hypothetical
protein W03G11.1b protein.
Length = 279
Score = 27.9 bits (59), Expect = 5.9
Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -2
Query: 570 PGXKGPVCLRDSDCGSTVPGGTLQILGSSPEAGVSAGRPDAEGSWSVCWRRGRPVHSGRE 391
PG +GP + G+ P G L G S A AG P A G+ +G P +GR
Sbjct: 173 PGPRGP----SGNPGADGPAGQLGPQGGSNVAPSPAGEPGAPGAQG---PKGPPGAAGRP 225
Query: 390 A-PGQAGA 370
GQ GA
Sbjct: 226 GRDGQPGA 233
>Z67738-3|CAA91544.2| 332|Caenorhabditis elegans Hypothetical
protein W03G11.1a protein.
Length = 332
Score = 27.9 bits (59), Expect = 5.9
Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -2
Query: 570 PGXKGPVCLRDSDCGSTVPGGTLQILGSSPEAGVSAGRPDAEGSWSVCWRRGRPVHSGRE 391
PG +GP + G+ P G L G S A AG P A G+ +G P +GR
Sbjct: 226 PGPRGP----SGNPGADGPAGQLGPQGGSNVAPSPAGEPGAPGAQG---PKGPPGAAGRP 278
Query: 390 A-PGQAGA 370
GQ GA
Sbjct: 279 GRDGQPGA 286
>Z49207-10|CAE17907.1| 551|Caenorhabditis elegans Hypothetical
protein F41E7.9 protein.
Length = 551
Score = 27.9 bits (59), Expect = 5.9
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = +2
Query: 395 RPEWTGRPRLQQTLQLPSASGRPAETPAS 481
+P W RP +Q+ +P+ G+P P S
Sbjct: 467 KPSWQDRPADRQSAVIPTLRGKPPAVPDS 495
>U97194-8|AAB52447.3| 1254|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 20
protein.
Length = 1254
Score = 27.9 bits (59), Expect = 5.9
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = +2
Query: 437 QLPSASGRPAETPASGEDPRI*RVPPGTVDPQSLSRRQTGPLXPGTSP 580
++PS SG+P P + + +I PG++ P T P PG+ P
Sbjct: 415 EVPSGSGQPTPVPGTPQPQQI-TPQPGSLGPMGSLGPPTAP--PGSQP 459
>AL132943-5|CAB81977.1| 367|Caenorhabditis elegans Hypothetical
protein Y116F11B.8 protein.
Length = 367
Score = 27.9 bits (59), Expect = 5.9
Identities = 16/55 (29%), Positives = 27/55 (49%)
Frame = +2
Query: 413 RPRLQQTLQLPSASGRPAETPASGEDPRI*RVPPGTVDPQSLSRRQTGPLXPGTS 577
+P + +L+ +A+ R + P + +PP T P +L +T P PGTS
Sbjct: 176 QPTRKPSLKTSAATSRATDAPVTS-------LPPPTDPPSTLGPMETPPNSPGTS 223
>AL032637-5|CAA21609.1| 245|Caenorhabditis elegans Hypothetical
protein Y43F8C.5 protein.
Length = 245
Score = 27.9 bits (59), Expect = 5.9
Identities = 14/45 (31%), Positives = 21/45 (46%)
Frame = -1
Query: 367 PSTTRTSISWTNILSPSDPSTPCRIPGTLNIPIRTTCSCAARRYL 233
P+TT T+ + T + P +TP + NI I C + YL
Sbjct: 198 PTTTTTTTTTTTVKPPPPTTTPKSSDSSANINILVFCIVSITTYL 242
>AL032635-1|CAA21600.1| 382|Caenorhabditis elegans Hypothetical
protein Y51A2A.1 protein.
Length = 382
Score = 27.9 bits (59), Expect = 5.9
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = +2
Query: 260 CRTNWNI*GSRDPAWCRRVGRREDICPG 343
C T+W + AWC +V + E + PG
Sbjct: 119 CPTDWMMFDRPSGAWCMKVFKTEKVLPG 146
>Z73972-2|CAA98258.1| 316|Caenorhabditis elegans Hypothetical
protein F15H10.2 protein.
Length = 316
Score = 27.5 bits (58), Expect = 7.8
Identities = 14/40 (35%), Positives = 17/40 (42%)
Frame = +2
Query: 371 APACPGASRPEWTGRPRLQQTLQLPSASGRPAETPASGED 490
AP PG + G P Q P A G P + A G+D
Sbjct: 256 APGQPGQAGSSQPGGPGPQGDAGAPGAPGAPGQAGAPGQD 295
>Z73972-1|CAA98257.1| 316|Caenorhabditis elegans Hypothetical
protein F15H10.1 protein.
Length = 316
Score = 27.5 bits (58), Expect = 7.8
Identities = 14/40 (35%), Positives = 17/40 (42%)
Frame = +2
Query: 371 APACPGASRPEWTGRPRLQQTLQLPSASGRPAETPASGED 490
AP PG + G P Q P A G P + A G+D
Sbjct: 256 APGQPGQAGSSQPGGPGPQGDAGAPGAPGAPGQAGAPGQD 295
>X51623-1|CAA35955.1| 316|Caenorhabditis elegans collagen protein.
Length = 316
Score = 27.5 bits (58), Expect = 7.8
Identities = 14/40 (35%), Positives = 17/40 (42%)
Frame = +2
Query: 371 APACPGASRPEWTGRPRLQQTLQLPSASGRPAETPASGED 490
AP PG + G P Q P A G P + A G+D
Sbjct: 256 APGQPGQAGSSQPGGPGPQGDAGAPGAPGAPGQAGAPGQD 295
>X51622-1|CAA35954.1| 316|Caenorhabditis elegans collagen protein.
Length = 316
Score = 27.5 bits (58), Expect = 7.8
Identities = 14/40 (35%), Positives = 17/40 (42%)
Frame = +2
Query: 371 APACPGASRPEWTGRPRLQQTLQLPSASGRPAETPASGED 490
AP PG + G P Q P A G P + A G+D
Sbjct: 256 APGQPGQAGSSQPGGPGPQGDAGAPGAPGAPGQAGAPGQD 295
>U80451-8|AAB37842.2| 288|Caenorhabditis elegans Collagen protein
20 protein.
Length = 288
Score = 27.5 bits (58), Expect = 7.8
Identities = 20/64 (31%), Positives = 24/64 (37%), Gaps = 2/64 (3%)
Frame = -2
Query: 570 PGXKGPVCLRDSDCGSTVPG--GTLQILGSSPEAGVSAGRPDAEGSWSVCWRRGRPVHSG 397
PG GP D G+ PG G ++ L S P G P G R G P +G
Sbjct: 182 PGPGGPQGEAGEDGGAGNPGTPGQVRSLPSPPGEPGQPGEPGGPGEPGADGRPGHPGRAG 241
Query: 396 REAP 385
P
Sbjct: 242 PPGP 245
>U23448-8|AAL27226.1| 849|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 5, isoform b
protein.
Length = 849
Score = 27.5 bits (58), Expect = 7.8
Identities = 15/41 (36%), Positives = 18/41 (43%)
Frame = +2
Query: 332 ICPGYRSPCRTWPAPACPGASRPEWTGRPRLQQTLQLPSAS 454
+CP S WP P P + R E G P T L S+S
Sbjct: 53 MCPTELSMSNAWPEPPPPYSPRHESWGLPSNANTTLLGSSS 93
>U23448-7|AAM81128.1| 868|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 5, isoform d
protein.
Length = 868
Score = 27.5 bits (58), Expect = 7.8
Identities = 15/41 (36%), Positives = 18/41 (43%)
Frame = +2
Query: 332 ICPGYRSPCRTWPAPACPGASRPEWTGRPRLQQTLQLPSAS 454
+CP S WP P P + R E G P T L S+S
Sbjct: 53 MCPTELSMSNAWPEPPPPYSPRHESWGLPSNANTTLLGSSS 93
>U23448-6|AAL27225.1| 915|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 5, isoform a
protein.
Length = 915
Score = 27.5 bits (58), Expect = 7.8
Identities = 15/41 (36%), Positives = 18/41 (43%)
Frame = +2
Query: 332 ICPGYRSPCRTWPAPACPGASRPEWTGRPRLQQTLQLPSAS 454
+CP S WP P P + R E G P T L S+S
Sbjct: 53 MCPTELSMSNAWPEPPPPYSPRHESWGLPSNANTTLLGSSS 93
>U23448-5|AAL27227.1| 912|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 5, isoform c
protein.
Length = 912
Score = 27.5 bits (58), Expect = 7.8
Identities = 15/41 (36%), Positives = 18/41 (43%)
Frame = +2
Query: 332 ICPGYRSPCRTWPAPACPGASRPEWTGRPRLQQTLQLPSAS 454
+CP S WP P P + R E G P T L S+S
Sbjct: 53 MCPTELSMSNAWPEPPPPYSPRHESWGLPSNANTTLLGSSS 93
>M80650-1|AAA27985.1| 298|Caenorhabditis elegans alpha-collagen
protein.
Length = 298
Score = 27.5 bits (58), Expect = 7.8
Identities = 24/75 (32%), Positives = 26/75 (34%), Gaps = 1/75 (1%)
Frame = +2
Query: 356 CRTWPAPACPG-ASRPEWTGRPRLQQTLQLPSASGRPAETPASGEDPRI*RVPPGTVDPQ 532
C + P PG A P GRP LP GRP + P P PP PQ
Sbjct: 96 CESCCLPGPPGPAGTPGKPGRPGKPGAPGLPGNPGRPPQQPCEPITP-----PPWKPCPQ 150
Query: 533 SLSRRQTGPLXPGTS 577
P PG S
Sbjct: 151 GPPGPPGPPGPPGDS 165
>AL021448-3|CAA16275.1| 291|Caenorhabditis elegans Hypothetical
protein Y2H9A.3 protein.
Length = 291
Score = 27.5 bits (58), Expect = 7.8
Identities = 23/67 (34%), Positives = 25/67 (37%)
Frame = -2
Query: 570 PGXKGPVCLRDSDCGSTVPGGTLQILGSSPEAGVSAGRPDAEGSWSVCWRRGRPVHSGRE 391
PG GP D G GG G + AG AG P A G G+ H
Sbjct: 147 PGPAGP----DGQPGQDGQGGQPGPAGPAGPAG-DAGAPGAPGQDGQPGAPGQDGHRSTG 201
Query: 390 APGQAGA 370
PG AGA
Sbjct: 202 TPGAAGA 208
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,209,091
Number of Sequences: 27780
Number of extensions: 365448
Number of successful extensions: 1353
Number of sequences better than 10.0: 58
Number of HSP's better than 10.0 without gapping: 1233
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1340
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1289949676
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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