BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P05_pT_B18
(604 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein. 25 0.43
AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein. 25 0.43
AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein. 25 0.43
AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 22 5.3
AB183889-1|BAD86829.1| 316|Apis mellifera Mos protein. 22 5.3
DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein. 21 7.0
AJ555537-1|CAD88245.1| 210|Apis mellifera putative chemosensory... 21 7.0
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 21 9.3
DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex det... 21 9.3
DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex det... 21 9.3
DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex det... 21 9.3
DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex det... 21 9.3
AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex det... 21 9.3
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 21 9.3
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 21 9.3
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 21 9.3
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 21 9.3
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 21 9.3
AF134820-1|AAD40235.1| 166|Apis mellifera putative Ets-family p... 21 9.3
>AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 25.4 bits (53), Expect = 0.43
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -2
Query: 366 QVRHGLLYPGQISSRRPTLLHHAGS 292
++ HG L + S+RP LLH GS
Sbjct: 649 ELTHGTLAASTLYSKRPDLLHLFGS 673
>AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 25.4 bits (53), Expect = 0.43
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -2
Query: 366 QVRHGLLYPGQISSRRPTLLHHAGS 292
++ HG L + S+RP LLH GS
Sbjct: 649 ELTHGTLAASTLYSKRPDLLHLFGS 673
>AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 25.4 bits (53), Expect = 0.43
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -2
Query: 366 QVRHGLLYPGQISSRRPTLLHHAGS 292
++ HG L + S+RP LLH GS
Sbjct: 649 ELTHGTLAASTLYSKRPDLLHLFGS 673
>AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein
75 protein.
Length = 900
Score = 21.8 bits (44), Expect = 5.3
Identities = 13/33 (39%), Positives = 16/33 (48%), Gaps = 2/33 (6%)
Frame = +3
Query: 111 CVRGAAQPERLDVGRYLARVD--AVEARALGEE 203
C RGA Q +GR LA D V R G++
Sbjct: 41 CYRGAPQDSENLLGRVLAEFDGTTVLCRVCGDK 73
>AB183889-1|BAD86829.1| 316|Apis mellifera Mos protein.
Length = 316
Score = 21.8 bits (44), Expect = 5.3
Identities = 8/23 (34%), Positives = 17/23 (73%)
Frame = +3
Query: 414 VLVSNRHSSFLQHLDGLRKLQLQ 482
+L S +H+SFL+H + ++ L ++
Sbjct: 104 MLNSEKHASFLKHSNIVKVLMIE 126
>DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein.
Length = 828
Score = 21.4 bits (43), Expect = 7.0
Identities = 7/24 (29%), Positives = 11/24 (45%)
Frame = -1
Query: 382 AGWCGPSTTRTSISWTNILSPSDP 311
+ + GP ISW ++ P P
Sbjct: 419 SSFVGPKVKDCLISWNPLMQPKQP 442
>AJ555537-1|CAD88245.1| 210|Apis mellifera putative chemosensory
receptor 2 protein.
Length = 210
Score = 21.4 bits (43), Expect = 7.0
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = +3
Query: 228 AAKYLLAAHEHVVRI 272
A KY + H+H+VR+
Sbjct: 102 AIKYWVERHKHIVRL 116
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 21.0 bits (42), Expect = 9.3
Identities = 9/26 (34%), Positives = 13/26 (50%)
Frame = -2
Query: 384 GQAGAGQVRHGLLYPGQISSRRPTLL 307
G G+V G+L PG + + P L
Sbjct: 260 GTVPVGRVETGILKPGMLVTFAPAAL 285
>DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.0 bits (42), Expect = 9.3
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -1
Query: 466 RRPSRC*RKLECLLETRTTCPLRTRS 389
RR + + E LLE RT+C +RS
Sbjct: 17 RRYEKLHNEKEKLLEERTSCKRYSRS 42
>DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.0 bits (42), Expect = 9.3
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -1
Query: 466 RRPSRC*RKLECLLETRTTCPLRTRS 389
RR + + E LLE RT+C +RS
Sbjct: 17 RRYEKLHNEKEKLLEERTSCKRYSRS 42
>DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.0 bits (42), Expect = 9.3
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -1
Query: 466 RRPSRC*RKLECLLETRTTCPLRTRS 389
RR + + E LLE RT+C +RS
Sbjct: 17 RRYEKLHNEKEKLLEERTSCKRYSRS 42
>DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.0 bits (42), Expect = 9.3
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -1
Query: 466 RRPSRC*RKLECLLETRTTCPLRTRS 389
RR + + E LLE RT+C +RS
Sbjct: 17 RRYEKLHNEKEKLLEERTSCKRYSRS 42
>AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 21.0 bits (42), Expect = 9.3
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -1
Query: 466 RRPSRC*RKLECLLETRTTCPLRTRS 389
RR + + E LLE RT+C +RS
Sbjct: 250 RRYEKLHNEKEKLLEERTSCKRYSRS 275
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.0 bits (42), Expect = 9.3
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -1
Query: 466 RRPSRC*RKLECLLETRTTCPLRTRS 389
RR + + E LLE RT+C +RS
Sbjct: 250 RRYEKLHNEKEKLLEERTSCKRYSRS 275
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.0 bits (42), Expect = 9.3
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -1
Query: 466 RRPSRC*RKLECLLETRTTCPLRTRS 389
RR + + E LLE RT+C +RS
Sbjct: 250 RRYEKLHNEKEKLLEERTSCKRYSRS 275
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.0 bits (42), Expect = 9.3
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -1
Query: 466 RRPSRC*RKLECLLETRTTCPLRTRS 389
RR + + E LLE RT+C +RS
Sbjct: 250 RRYEKLHNEKEKLLEERTSCKRYSRS 275
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.0 bits (42), Expect = 9.3
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -1
Query: 466 RRPSRC*RKLECLLETRTTCPLRTRS 389
RR + + E LLE RT+C +RS
Sbjct: 250 RRYEKLHNEKEKLLEERTSCKRYSRS 275
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 21.0 bits (42), Expect = 9.3
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -1
Query: 466 RRPSRC*RKLECLLETRTTCPLRTRS 389
RR + + E LLE RT+C +RS
Sbjct: 239 RRYEKLHNEKEKLLEERTSCKRYSRS 264
>AF134820-1|AAD40235.1| 166|Apis mellifera putative Ets-family
protein protein.
Length = 166
Score = 21.0 bits (42), Expect = 9.3
Identities = 7/16 (43%), Positives = 13/16 (81%)
Frame = +3
Query: 387 ELLVRSGQVVLVSNRH 434
+ L+RSGQ+ ++S+ H
Sbjct: 63 QYLIRSGQLNIISSDH 78
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 186,843
Number of Sequences: 438
Number of extensions: 4529
Number of successful extensions: 21
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17726685
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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