Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_pT_B13
         (716 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-12|CAD27934.1|  160|Anopheles gambiae putative MLC1 pro...    42   1e-05
L76038-1|AAC27383.1|  683|Anopheles gambiae prophenoloxidase pro...    25   2.3  
AF031626-1|AAD01936.1|  683|Anopheles gambiae prophenoloxidase p...    25   2.3  
AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic acetylch...    23   7.2  

>AJ439353-12|CAD27934.1|  160|Anopheles gambiae putative MLC1
           protein protein.
          Length = 160

 Score = 42.3 bits (95), Expect = 1e-05
 Identities = 24/89 (26%), Positives = 45/89 (50%), Gaps = 2/89 (2%)
 Frame = -3

Query: 621 KINFDGFCNIASHFLEEEDAEAMQQELKEAFRLYDREGNGYITTSTLKEILAALDDKLSN 442
           KI F+ F  I S   +E++    +  L E  +LYD+  +G +  + L   L AL ++L +
Sbjct: 62  KIKFEEFLPIFSQVKKEKEQGCFEDFL-ECLKLYDKNEDGTMLLAELTHSLTALGERLDD 120

Query: 441 ADLDGIIAEI--DTDGSGTVDFDEFMEMM 361
            +LD ++ +     D  G + +  F++ M
Sbjct: 121 VELDNVMKDCMDPEDDDGNIPYAPFLKKM 149



 Score = 27.5 bits (58), Expect = 0.44
 Identities = 24/85 (28%), Positives = 38/85 (44%), Gaps = 1/85 (1%)
 Frame = -3

Query: 531 FRLYDREGNGYITTSTLKEILAALDDKLSNADLDGIIAEIDTDGSGTVDFDEFMEMMTGD 352
           F +YD EG+G +    L   L AL+      +L G +      G   + F+EF+ +    
Sbjct: 17  FSVYDWEGSGQMDAMDLGNALRALNLN-PTIELIGKMGGTQKRGEKKIKFEEFLPIF--- 72

Query: 351 *AQRSKDSQXXXXXXYLFC-KLY*K 280
            +Q  K+ +      +L C KLY K
Sbjct: 73  -SQVKKEKEQGCFEDFLECLKLYDK 96


>L76038-1|AAC27383.1|  683|Anopheles gambiae prophenoloxidase
           protein.
          Length = 683

 Score = 25.0 bits (52), Expect = 2.3
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = +3

Query: 168 STFLQDRQNRYVFNFFLSV 224
           + F +DR N Y+FN+ LSV
Sbjct: 111 AVFARDRINPYLFNYALSV 129


>AF031626-1|AAD01936.1|  683|Anopheles gambiae prophenoloxidase
           protein.
          Length = 683

 Score = 25.0 bits (52), Expect = 2.3
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = +3

Query: 168 STFLQDRQNRYVFNFFLSV 224
           + F +DR N Y+FN+ LSV
Sbjct: 111 AVFARDRINPYLFNYALSV 129


>AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 3 protein.
          Length = 710

 Score = 23.4 bits (48), Expect = 7.2
 Identities = 10/32 (31%), Positives = 18/32 (56%)
 Frame = -3

Query: 609 DGFCNIASHFLEEEDAEAMQQELKEAFRLYDR 514
           DG   IA H  +EE++  ++++ K    + DR
Sbjct: 627 DGVTYIADHTRKEEESSRVKEDWKYVAMVLDR 658


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 645,371
Number of Sequences: 2352
Number of extensions: 11277
Number of successful extensions: 36
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 72765525
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)