Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P05_pT_B12
(605 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 253 8e-68
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 253 8e-68
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 253 8e-68
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 253 8e-68
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 253 8e-68
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 253 8e-68
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 252 1e-67
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 252 1e-67
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 252 1e-67
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 246 1e-65
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 241 4e-64
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 134 5e-32
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 113 9e-26
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 105 3e-23
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 92 3e-19
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 84 9e-17
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 67 1e-11
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 67 1e-11
U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical pr... 48 7e-06
U40426-4|AAP40527.1| 144|Caenorhabditis elegans Diacylglycerol ... 31 0.48
U40426-3|AAP40528.1| 351|Caenorhabditis elegans Diacylglycerol ... 31 0.48
U40426-2|AAP40526.1| 536|Caenorhabditis elegans Diacylglycerol ... 31 0.48
Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical pr... 28 5.9
U28741-1|AAA68325.2| 256|Caenorhabditis elegans Hypothetical pr... 28 5.9
M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-re... 28 5.9
AL032654-9|CAA21720.1| 404|Caenorhabditis elegans Hypothetical ... 28 5.9
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 253 bits (619), Expect = 8e-68
Identities = 119/133 (89%), Positives = 124/133 (93%)
Frame = -1
Query: 590 LTIGNLNEFGRPIRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGG 411
+T+GN RCPEALFQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSGG
Sbjct: 249 ITVGN-----ERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGG 303
Query: 410 TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY 231
TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY
Sbjct: 304 TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY 363
Query: 230 DESGPSIVHRKCF 192
DESGPSIVHRKCF
Sbjct: 364 DESGPSIVHRKCF 376
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 253 bits (619), Expect = 8e-68
Identities = 119/133 (89%), Positives = 124/133 (93%)
Frame = -1
Query: 590 LTIGNLNEFGRPIRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGG 411
+T+GN RCPEALFQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSGG
Sbjct: 249 ITVGN-----ERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGG 303
Query: 410 TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY 231
TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY
Sbjct: 304 TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY 363
Query: 230 DESGPSIVHRKCF 192
DESGPSIVHRKCF
Sbjct: 364 DESGPSIVHRKCF 376
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 253 bits (619), Expect = 8e-68
Identities = 119/133 (89%), Positives = 124/133 (93%)
Frame = -1
Query: 590 LTIGNLNEFGRPIRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGG 411
+T+GN RCPEALFQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSGG
Sbjct: 249 ITVGN-----ERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGG 303
Query: 410 TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY 231
TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY
Sbjct: 304 TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY 363
Query: 230 DESGPSIVHRKCF 192
DESGPSIVHRKCF
Sbjct: 364 DESGPSIVHRKCF 376
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 253 bits (619), Expect = 8e-68
Identities = 119/133 (89%), Positives = 124/133 (93%)
Frame = -1
Query: 590 LTIGNLNEFGRPIRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGG 411
+T+GN RCPEALFQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSGG
Sbjct: 205 ITVGN-----ERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGG 259
Query: 410 TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY 231
TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY
Sbjct: 260 TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY 319
Query: 230 DESGPSIVHRKCF 192
DESGPSIVHRKCF
Sbjct: 320 DESGPSIVHRKCF 332
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 253 bits (619), Expect = 8e-68
Identities = 119/133 (89%), Positives = 124/133 (93%)
Frame = -1
Query: 590 LTIGNLNEFGRPIRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGG 411
+T+GN RCPEALFQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSGG
Sbjct: 235 ITVGN-----ERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGG 289
Query: 410 TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY 231
TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY
Sbjct: 290 TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY 349
Query: 230 DESGPSIVHRKCF 192
DESGPSIVHRKCF
Sbjct: 350 DESGPSIVHRKCF 362
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 253 bits (619), Expect = 8e-68
Identities = 119/133 (89%), Positives = 124/133 (93%)
Frame = -1
Query: 590 LTIGNLNEFGRPIRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGG 411
+T+GN RCPEALFQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSGG
Sbjct: 249 ITVGN-----ERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGG 303
Query: 410 TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY 231
TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY
Sbjct: 304 TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY 363
Query: 230 DESGPSIVHRKCF 192
DESGPSIVHRKCF
Sbjct: 364 DESGPSIVHRKCF 376
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 252 bits (617), Expect = 1e-67
Identities = 118/133 (88%), Positives = 124/133 (93%)
Frame = -1
Query: 590 LTIGNLNEFGRPIRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGG 411
+T+GN RCPEA+FQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSGG
Sbjct: 249 ITVGN-----ERFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGG 303
Query: 410 TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY 231
TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY
Sbjct: 304 TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY 363
Query: 230 DESGPSIVHRKCF 192
DESGPSIVHRKCF
Sbjct: 364 DESGPSIVHRKCF 376
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 252 bits (617), Expect = 1e-67
Identities = 118/133 (88%), Positives = 124/133 (93%)
Frame = -1
Query: 590 LTIGNLNEFGRPIRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGG 411
+T+GN RCPEA+FQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSGG
Sbjct: 249 ITVGN-----ERFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGG 303
Query: 410 TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY 231
TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY
Sbjct: 304 TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY 363
Query: 230 DESGPSIVHRKCF 192
DESGPSIVHRKCF
Sbjct: 364 DESGPSIVHRKCF 376
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 252 bits (617), Expect = 1e-67
Identities = 118/133 (88%), Positives = 124/133 (93%)
Frame = -1
Query: 590 LTIGNLNEFGRPIRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGG 411
+T+GN RCPEA+FQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSGG
Sbjct: 249 ITVGN-----ERFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGG 303
Query: 410 TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY 231
TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY
Sbjct: 304 TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY 363
Query: 230 DESGPSIVHRKCF 192
DESGPSIVHRKCF
Sbjct: 364 DESGPSIVHRKCF 376
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 246 bits (602), Expect = 1e-65
Identities = 117/133 (87%), Positives = 123/133 (92%)
Frame = -1
Query: 590 LTIGNLNEFGRPIRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGG 411
+T+GN RCPEA+FQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSGG
Sbjct: 249 ITVGN-----ERFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGG 303
Query: 410 TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY 231
TTMYPGIADRMQKEITALAP TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY
Sbjct: 304 TTMYPGIADRMQKEITALAP-TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY 362
Query: 230 DESGPSIVHRKCF 192
DESGPSIVHRKCF
Sbjct: 363 DESGPSIVHRKCF 375
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 241 bits (589), Expect = 4e-64
Identities = 114/133 (85%), Positives = 119/133 (89%)
Frame = -1
Query: 590 LTIGNLNEFGRPIRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGG 411
+TIGN RCPE LFQP+F+GME GIHETTY SIMKCDVDIRKDLYANTVLSGG
Sbjct: 248 ITIGN-----ERFRCPEVLFQPAFIGMEGAGIHETTYQSIMKCDVDIRKDLYANTVLSGG 302
Query: 410 TTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY 231
T+M+PGIADRMQKEI LAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY
Sbjct: 303 TSMFPGIADRMQKEIQHLAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY 362
Query: 230 DESGPSIVHRKCF 192
DESGPSIVHRKCF
Sbjct: 363 DESGPSIVHRKCF 375
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 134 bits (324), Expect = 5e-32
Identities = 60/120 (50%), Positives = 83/120 (69%)
Frame = -1
Query: 551 RCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQK 372
R PE LF+P +G E G+ SIMKCDVD+R+ LY+N VLSGGTT++ G DR+
Sbjct: 255 RAPEVLFKPDLIGTEWPGMAHVVNQSIMKCDVDLRQTLYSNIVLSGGTTLFKGFGDRLLG 314
Query: 371 EITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 192
E+ +AP+ KI+I A ER WIGGSI+ASL TF++MW+ K+EY++ G S +H++ F
Sbjct: 315 EMRKIAPADGKIRISASQERNSLTWIGGSIVASLDTFRKMWLGKKEYEDMGASAMHKRFF 374
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 113 bits (272), Expect = 9e-26
Identities = 59/138 (42%), Positives = 79/138 (57%), Gaps = 9/138 (6%)
Frame = -1
Query: 581 GNLNEFGRP-IRCPEALFQPSFLGMEA-----CGIHETTYNSIMKCDVDIRKDLYANTVL 420
G EFG I+ PE LF +L E + + S D+DIR L++N +
Sbjct: 298 GYTKEFGAERIKLPECLFDLGYLKAEGKKDGLMTVAQMAAASANLADIDIRPTLFSNVTV 357
Query: 419 SGGTTMYPGIADRMQKEITALAPSTMKIKIIAPP---ERKYSVWIGGSILASLSTFQQMW 249
+GG ++ G +R+ + P T+K+++ A P ERKY WIGGSIL SL TFQQMW
Sbjct: 358 TGGNSLILGFTERLNYALATKCPPTIKLRVFAAPTQAERKYGAWIGGSILGSLGTFQQMW 417
Query: 248 ISKQEYDESGPSIVHRKC 195
+SK EYDESG SIV +KC
Sbjct: 418 VSKAEYDESGKSIVEKKC 435
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 105 bits (251), Expect = 3e-23
Identities = 54/128 (42%), Positives = 74/128 (57%), Gaps = 13/128 (10%)
Frame = -1
Query: 563 GRPIRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIAD 384
G PE LFQP + +E G+ E + I D+D R D Y + VLSGGTTMYPG+
Sbjct: 256 GERFEAPEILFQPHLINVEKAGLSELLFGCIQASDIDTRLDFYKHIVLSGGTTMYPGLPS 315
Query: 383 RMQKEITAL-----------APSTMKIKIIAPPERKYSVWIGGSILASL--STFQQMWIS 243
R++KE+ L A KI+I APP RK+ V++GG++LA+L Q W+S
Sbjct: 316 RLEKELKQLYLDRVLHGNTDAFQKFKIRIEAPPSRKHMVFLGGAVLANLMKDRDQDFWVS 375
Query: 242 KQEYDESG 219
K+EY+E G
Sbjct: 376 KKEYEEGG 383
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 91.9 bits (218), Expect = 3e-19
Identities = 37/105 (35%), Positives = 69/105 (65%)
Frame = -1
Query: 548 CPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKE 369
C E LF+P G++ G+H+ + +I++C +D R+ LY N L+GG ++ PGIA+++++E
Sbjct: 435 CTEGLFKPKKWGLDTKGLHQLIHEAILQCPIDSRRTLYRNIYLAGGASLMPGIAEKLEQE 494
Query: 368 ITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 234
++ + P+T+ ++ P R + ++G I+AS STF+ IS Q+
Sbjct: 495 LSTVVPNTIHTQVNISPWRYNAAYLGAQIVASASTFEDSCISLQQ 539
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 83.8 bits (198), Expect = 9e-17
Identities = 47/129 (36%), Positives = 71/129 (55%), Gaps = 17/129 (13%)
Frame = -1
Query: 545 PEALFQPSFLGME-ACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKE 369
PE F P F E I +T I +C +D+R+ LY N VLSGG+TM+ A ++Q++
Sbjct: 286 PEIFFHPEFCNPEFTTPISDTIDTLIQQCPIDVRRGLYENIVLSGGSTMFKDFARKLQRD 345
Query: 368 ITALA----------------PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ 237
+ L+ P + +++I+ ++Y+VW GGS+LAS S F Q+ +K
Sbjct: 346 VKRLSDGRLQMSETLSGGRLKPKPIDVQVISHKMQRYAVWFGGSMLASTSEFYQVSHTKA 405
Query: 236 EYDESGPSI 210
EY E GPSI
Sbjct: 406 EYMERGPSI 414
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 66.9 bits (156), Expect = 1e-11
Identities = 35/123 (28%), Positives = 66/123 (53%), Gaps = 3/123 (2%)
Frame = -1
Query: 545 PEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEI 366
PE LF PS + ++ CG+ E SI +C +R L N ++ GG++ +PG +R+++E+
Sbjct: 273 PEILFNPSDIDIDQCGVAEAVIESICQCPEALRPALAENIIVIGGSSCFPGFRERLEREV 332
Query: 365 TALAPSTMKIKI---IAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKC 195
++ P+ + + + P+ W G L L+ + WI+++++DE G S+
Sbjct: 333 RSMLPAEYGLNVSNDVINPQT--HSWHCGQEL--LTASKVPWINRKDWDERGDSLEFSNF 388
Query: 194 F*T 186
F T
Sbjct: 389 FQT 391
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 66.9 bits (156), Expect = 1e-11
Identities = 35/123 (28%), Positives = 66/123 (53%), Gaps = 3/123 (2%)
Frame = -1
Query: 545 PEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEI 366
PE LF PS + ++ CG+ E SI +C +R L N ++ GG++ +PG +R+++E+
Sbjct: 273 PEILFNPSDIDIDQCGVAEAVIESICQCPEALRPALAENIIVIGGSSCFPGFRERLEREV 332
Query: 365 TALAPSTMKIKI---IAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKC 195
++ P+ + + + P+ W G L L+ + WI+++++DE G S+
Sbjct: 333 RSMLPAEYGLNVSNDVINPQT--HSWHCGQEL--LTASKVPWINRKDWDERGDSLEFSNF 388
Query: 194 F*T 186
F T
Sbjct: 389 FQT 391
>U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical
protein C49H3.8 protein.
Length = 305
Score = 47.6 bits (108), Expect = 7e-06
Identities = 28/91 (30%), Positives = 51/91 (56%), Gaps = 10/91 (10%)
Frame = -1
Query: 473 IMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITAL-APSTMKIKIIAP----PERK 309
+ KC +D+RK L+ N +L+GG + PG+ R+++EI + + KI +I E K
Sbjct: 198 VSKCPIDLRKKLFPNILLTGGVSTIPGLMKRLEQEIQVIDEKNNSKIAVIVKFYQFSEIK 257
Query: 308 ----YSVWIGGSILASL-STFQQMWISKQEY 231
+ W+G S+L SL T ++ ++ +E+
Sbjct: 258 NTPLFVSWLGASLLGSLRETIERKSLTLEEW 288
>U40426-4|AAP40527.1| 144|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform b protein.
Length = 144
Score = 31.5 bits (68), Expect = 0.48
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +3
Query: 297 PYGVLPLWRSNDLNLHCRWGESCD 368
P VLPL NDL+ +WG+ CD
Sbjct: 97 PVAVLPLGTGNDLSRLLKWGKKCD 120
>U40426-3|AAP40528.1| 351|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform c protein.
Length = 351
Score = 31.5 bits (68), Expect = 0.48
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +3
Query: 297 PYGVLPLWRSNDLNLHCRWGESCD 368
P VLPL NDL+ +WG+ CD
Sbjct: 97 PVAVLPLGTGNDLSRLLKWGKKCD 120
>U40426-2|AAP40526.1| 536|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform a protein.
Length = 536
Score = 31.5 bits (68), Expect = 0.48
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +3
Query: 297 PYGVLPLWRSNDLNLHCRWGESCD 368
P VLPL NDL+ +WG+ CD
Sbjct: 282 PVAVLPLGTGNDLSRLLKWGKKCD 305
>Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical protein
F29D11.1 protein.
Length = 4753
Score = 27.9 bits (59), Expect = 5.9
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +1
Query: 133 KPELSSRPRAAGGSDARCV*KHFLCTMEGPD 225
+P + R A GG DA+C+ K + C E PD
Sbjct: 3624 EPNCTERQFACGGDDAKCIPKLWYCDGE-PD 3653
>U28741-1|AAA68325.2| 256|Caenorhabditis elegans Hypothetical
protein F35D2.3 protein.
Length = 256
Score = 27.9 bits (59), Expect = 5.9
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = -1
Query: 236 EYDESGPSIVHRKCF*THRASLPPAARGRLLNSG 135
+Y ++G SIV+ KC T R P R R LN G
Sbjct: 30 DYCKNGGSIVNGKCECTLRYEGPQCERERCLNGG 63
>M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-related
protein protein.
Length = 4753
Score = 27.9 bits (59), Expect = 5.9
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +1
Query: 133 KPELSSRPRAAGGSDARCV*KHFLCTMEGPD 225
+P + R A GG DA+C+ K + C E PD
Sbjct: 3624 EPNCTERQFACGGDDAKCIPKLWYCDGE-PD 3653
>AL032654-9|CAA21720.1| 404|Caenorhabditis elegans Hypothetical
protein Y52B11A.9 protein.
Length = 404
Score = 27.9 bits (59), Expect = 5.9
Identities = 19/54 (35%), Positives = 25/54 (46%)
Frame = -1
Query: 317 ERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF*THRASLPPAAR 156
+RK V G A +S F + K++ DE GPS RK S PAA+
Sbjct: 213 DRKLDVK-SGVASAKISIFDMPKVKKEDPDEPGPSQPSRKSGKKRSRSRSPAAK 265
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,966,635
Number of Sequences: 27780
Number of extensions: 301845
Number of successful extensions: 898
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 874
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 892
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1300523034
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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