Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P05_pT_B10
(534 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1919.07 |||sequence orphan|Schizosaccharomyces pombe|chr 3||... 29 0.33
SPBC887.03c |noc3||Noc2p-Noc3p complex subunit Noc3 |Schizosacch... 29 0.33
SPAC31G5.10 |eta2||Myb family transcriptional regulator Eta2|Sch... 29 0.44
SPCC584.15c |||arrestin/PY protein 2|Schizosaccharomyces pombe|c... 29 0.58
SPCC622.10c |||exocyst complex subunit Sec5 |Schizosaccharomyces... 27 1.8
SPBP4H10.19c |||calreticulin/calnexin homolog|Schizosaccharomyce... 26 3.1
SPCC330.09 |||rRNA processing protein Enp2 |Schizosaccharomyces ... 26 3.1
SPAC5D6.10c |mug116||sequence orphan|Schizosaccharomyces pombe|c... 26 3.1
SPAC57A7.11 |mip1||WD repeat protein Mip1|Schizosaccharomyces po... 26 4.1
SPCP1E11.11 |||Puf family RNA-binding protein|Schizosaccharomyce... 25 5.4
SPAC959.05c |||protein disulfide isomerase |Schizosaccharomyces ... 25 5.4
SPCC132.01c ||SPCC1322.17c|DUF814 family protein|Schizosaccharom... 25 5.4
SPAC19B12.03 |bgs3||1,3-beta-glucan synthase subunit Bgs3|Schizo... 25 5.4
SPAC17A2.10c |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 25 7.1
SPBC342.05 |crb2|rhp9, rhp9|DNA repair protein RAD9 homolog, Rhp... 25 7.1
SPAC2G11.12 |rqh1|hus2, rad12, rec9|RecQ type DNA helicase Rqh1|... 25 7.1
SPAC1687.13c |csn5||COP9/signalosome complex subunit Csn5|Schizo... 25 9.4
SPAC18G6.02c |chp1||chromodomain protein Chp1|Schizosaccharomyce... 25 9.4
SPBC1861.04c |||RNA-binding protein Prp24|Schizosaccharomyces po... 25 9.4
SPBC887.04c |lub1||WD repeat protein Lub1|Schizosaccharomyces po... 25 9.4
SPBC839.16 |||C-1-tetrahydrofolate synthase|Schizosaccharomyces ... 25 9.4
>SPCC1919.07 |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 206
Score = 29.5 bits (63), Expect = 0.33
Identities = 14/52 (26%), Positives = 27/52 (51%)
Frame = -2
Query: 434 ETTDKKGKKSIRQTKRENYLKRQAQAAELSKNQLKSQCLSYLSQWKHDKQNW 279
E+ D+ SI + K ENY+ + +S+N + +Y+S+ + Q+W
Sbjct: 153 ESMDQSAPPSITEDKGENYISSNHSSMHISRNDSR----NYMSEKPNKDQSW 200
>SPBC887.03c |noc3||Noc2p-Noc3p complex subunit Noc3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 747
Score = 29.5 bits (63), Expect = 0.33
Identities = 25/95 (26%), Positives = 43/95 (45%)
Frame = -2
Query: 383 NYLKRQAQAAELSKNQLKSQCLSYLSQWKHDKQNWKFMKVKQLWLLKNKFSTNLVPDESW 204
N LK + L K LK C++ LS+ + V L+L N + + DE+W
Sbjct: 378 NSLKNIFEEDNLGKTSLK--CVTILSRMFKQRNYDVLPDVYDLFLSVNILNDMKIKDEAW 435
Query: 203 QTLIEYFESAKGNVRTLLLEDAKKVIKQMDEWTEK 99
Q F+ K ++ L + A+K K+ + T++
Sbjct: 436 QDDTTNFKKRKKDL-PYLTKKARKNYKETKKITQE 469
>SPAC31G5.10 |eta2||Myb family transcriptional regulator
Eta2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 569
Score = 29.1 bits (62), Expect = 0.44
Identities = 22/92 (23%), Positives = 43/92 (46%)
Frame = -2
Query: 374 KRQAQAAELSKNQLKSQCLSYLSQWKHDKQNWKFMKVKQLWLLKNKFSTNLVPDESWQTL 195
K ++ E + Q + SY S + ++ K K K+ K+K +S + L
Sbjct: 442 KLGTKSPESCRKQYEKTIASYSSNQRQEEDQGK--KRKKRKKKKSKGKRKFYVADSLK-L 498
Query: 194 IEYFESAKGNVRTLLLEDAKKVIKQMDEWTEK 99
+E+ + G ++ D K ++KQM +W+E+
Sbjct: 499 LEHVQRQCGEAISINAIDWKGIVKQMPKWSEE 530
>SPCC584.15c |||arrestin/PY protein 2|Schizosaccharomyces pombe|chr
3|||Manual
Length = 594
Score = 28.7 bits (61), Expect = 0.58
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = +3
Query: 273 ELPVLFVMFPLGKIAETLRFELIF*KFCSLGLTFKIVFSLC 395
E+PV ++PL K + + L+ ++C+L +T K S C
Sbjct: 203 EIPVNITLYPLLKGLDVGKVTLVLKEYCTLFITSKAYSSTC 243
>SPCC622.10c |||exocyst complex subunit Sec5 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 815
Score = 27.1 bits (57), Expect = 1.8
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = -3
Query: 478 KKHRVKRKRKSPLLPKQLIKKVKSRYDKQREKTILNVKPKL 356
+K R+ K++ L Q I+ K Y+K RE+ + V PKL
Sbjct: 226 EKFRLYHKQEKYSLLMQEIENAKKLYEKDRER-LAKVNPKL 265
>SPBP4H10.19c |||calreticulin/calnexin homolog|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 381
Score = 26.2 bits (55), Expect = 3.1
Identities = 14/61 (22%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Frame = +1
Query: 109 HSSICLMTFFASSSNNVRTFPFADSKYSIRVCQDSSGTKLVENLF--LSSHNCLTFMNFQ 282
++S +M+F S++ N ++PF+ + + V +++G + N++ S + + F N
Sbjct: 231 YTSRNIMSFLLSNNTNTSSYPFSVNGVELDVWNENAGV-FINNIYFGFSLSDAMKFENET 289
Query: 283 F 285
F
Sbjct: 290 F 290
>SPCC330.09 |||rRNA processing protein Enp2 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 634
Score = 26.2 bits (55), Expect = 3.1
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = -3
Query: 421 KKVKSRYDKQREKTILNVKPKLQNFQKINSNLSVSAIFPSGNMTNKTG 278
K VK R +KQR I + QN K+N+ L+ + + KTG
Sbjct: 439 KIVKERLEKQRASKI-----RSQNRPKVNAGLASRLSYQENKLRKKTG 481
>SPAC5D6.10c |mug116||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 135
Score = 26.2 bits (55), Expect = 3.1
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = -3
Query: 508 SDXTLMTPMQKKHRVKRKRKSPLLPKQLIKKVK 410
S T TP +K ++ K+KRK + +++K K
Sbjct: 76 SSHTFQTPTKKGNKTKKKRKKEKKKETIVEKNK 108
>SPAC57A7.11 |mip1||WD repeat protein Mip1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1313
Score = 25.8 bits (54), Expect = 4.1
Identities = 20/74 (27%), Positives = 33/74 (44%)
Frame = -2
Query: 368 QAQAAELSKNQLKSQCLSYLSQWKHDKQNWKFMKVKQLWLLKNKFSTNLVPDESWQTLIE 189
Q Q A L+ Q+ S CLS+L+ + W + + QLW ++ + D + L E
Sbjct: 612 QGQLACLNP-QVLSHCLSHLNSPDSLLRQWACLCISQLWENYSEAKWSGTRDNAHVKLAE 670
Query: 188 YFESAKGNVRTLLL 147
+ VR +L
Sbjct: 671 IIVDSVPEVRASVL 684
>SPCP1E11.11 |||Puf family RNA-binding protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 642
Score = 25.4 bits (53), Expect = 5.4
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = -3
Query: 481 QKKHRVKRKRKSPLLPKQLIKKVKSRYDKQREKTILNVKPK 359
+KK + +RK P L K KS +DK R+KT + + +
Sbjct: 113 RKKLQKERKAMKPFADTSL--KAKSLWDKLRQKTSIKAEER 151
>SPAC959.05c |||protein disulfide isomerase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 632
Score = 25.4 bits (53), Expect = 5.4
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = +1
Query: 268 FMNFQFCLSCFHWE 309
F++ + C CFHWE
Sbjct: 203 FVSLKHCEDCFHWE 216
>SPCC132.01c ||SPCC1322.17c|DUF814 family
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1021
Score = 25.4 bits (53), Expect = 5.4
Identities = 13/47 (27%), Positives = 23/47 (48%)
Frame = -2
Query: 494 DDSDAEETPRXXXXXKPVITETTDKKGKKSIRQTKRENYLKRQAQAA 354
+D++ + TP +++E KKG K I K +R+A+ A
Sbjct: 748 EDTNNQSTPDTTGSDIHIVSEKRGKKGSKVITAKKVSAKERREARRA 794
>SPAC19B12.03 |bgs3||1,3-beta-glucan synthase subunit
Bgs3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1826
Score = 25.4 bits (53), Expect = 5.4
Identities = 12/39 (30%), Positives = 21/39 (53%), Gaps = 5/39 (12%)
Frame = +3
Query: 51 LFTVFFIYFLFITLTMFFCPFI---HLFN--DFFCIFKQ 152
++T ++YF + CPFI H F+ DFF +++
Sbjct: 1437 VWTTHYVYFWVTMFALVICPFIYNPHQFSFVDFFVDYRE 1475
>SPAC17A2.10c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 230
Score = 25.0 bits (52), Expect = 7.1
Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Frame = +3
Query: 30 VSLF-CCILFTVFFIYFLFITLTMFFCPFI-HLFNDFFCIF 146
+SLF C +LF F ++FL + + F F+ +F +F F
Sbjct: 110 LSLFRCLLLFFFFLLFFLSFSFSFSFLFFLSQIFIVYFSSF 150
>SPBC342.05 |crb2|rhp9, rhp9|DNA repair protein RAD9 homolog,
Rhp9|Schizosaccharomyces pombe|chr 2|||Manual
Length = 778
Score = 25.0 bits (52), Expect = 7.1
Identities = 15/58 (25%), Positives = 30/58 (51%)
Frame = -3
Query: 475 KHRVKRKRKSPLLPKQLIKKVKSRYDKQREKTILNVKPKLQNFQKINSNLSVSAIFPS 302
+H ++ SP PKQ +K YD+Q ++++ KL Q ++++ + + F S
Sbjct: 99 QHDSRKVISSPYSPKQTHTVLKRLYDRQ---SVISDHEKLLTPQNVSNSSQILSPFTS 153
>SPAC2G11.12 |rqh1|hus2, rad12, rec9|RecQ type DNA helicase
Rqh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1328
Score = 25.0 bits (52), Expect = 7.1
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = -2
Query: 158 TLLLEDAKKVIKQMDEWTEKHGQSNKQEID 69
++LL AKK+ + + E E HG SN++ ++
Sbjct: 1147 SVLLSMAKKLPRNVKELKEIHGVSNEKAVN 1176
>SPAC1687.13c |csn5||COP9/signalosome complex subunit
Csn5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 299
Score = 24.6 bits (51), Expect = 9.4
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = -2
Query: 308 SQWKHDKQNWKFMKVKQLWLLK 243
S WKHD + ++ +K+ + LLK
Sbjct: 23 SPWKHDPEFFRSVKISAVALLK 44
>SPAC18G6.02c |chp1||chromodomain protein Chp1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 960
Score = 24.6 bits (51), Expect = 9.4
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = -2
Query: 203 QTLIEYFESAKGNVRTLLLEDAKK 132
Q ++ YF KGN+ L+ KK
Sbjct: 325 QDILSYFAFIKGNIEVFFLKSPKK 348
>SPBC1861.04c |||RNA-binding protein Prp24|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1014
Score = 24.6 bits (51), Expect = 9.4
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = -2
Query: 230 TNLVPDESWQTLIEYFESAKGNVRTLLLEDAKKVIK 123
TNL D S L +F+ +R +LED +K +K
Sbjct: 595 TNLPSDISENELKIFFKDCGNIIRIFILEDNQKDVK 630
>SPBC887.04c |lub1||WD repeat protein Lub1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 713
Score = 24.6 bits (51), Expect = 9.4
Identities = 15/46 (32%), Positives = 22/46 (47%)
Frame = -2
Query: 353 ELSKNQLKSQCLSYLSQWKHDKQNWKFMKVKQLWLLKNKFSTNLVP 216
+ KN+L CLS L W + +F + L LL S++L P
Sbjct: 508 DTEKNELLETCLSILDSWSLAE---RFPALDALRLLAINSSSDLAP 550
>SPBC839.16 |||C-1-tetrahydrofolate synthase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 937
Score = 24.6 bits (51), Expect = 9.4
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = -3
Query: 469 RVKRKRKSPLLPKQLIKKVKSRYDKQREKTILNV 368
++ RKRK LLP +L V S + R +T N+
Sbjct: 292 KMSRKRKPTLLPLKLQTPVPSDIEIARSQTPKNI 325
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,913,072
Number of Sequences: 5004
Number of extensions: 38499
Number of successful extensions: 181
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 171
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 180
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 220420454
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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