Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P05_pT_B10
(534 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC006224-1|AAH06224.1| 194|Homo sapiens MGC11257 protein protein. 78 2e-14
AF495721-1|AAQ06675.1| 194|Homo sapiens unknown protein. 78 2e-14
BC032435-1|AAH32435.1| 716|Homo sapiens RABEP1 protein protein. 33 0.63
BC130449-1|AAI30450.1| 1253|Homo sapiens PPP1R9A protein protein. 31 1.9
X62155-1|CAA44080.1| 223|Homo sapiens Myf4 protein protein. 29 7.8
X17651-1|CAA35641.1| 246|Homo sapiens protein ( Human Myf-4 mRN... 29 7.8
BT007233-1|AAP35897.1| 224|Homo sapiens myogenin (myogenic fact... 29 7.8
BC053899-1|AAH53899.1| 224|Homo sapiens myogenin (myogenic fact... 29 7.8
AK128197-1|BAC87320.1| 161|Homo sapiens protein ( Homo sapiens ... 29 7.8
AF050501-1|AAG22573.1| 215|Homo sapiens myogenin protein. 29 7.8
>BC006224-1|AAH06224.1| 194|Homo sapiens MGC11257 protein protein.
Length = 194
Score = 77.8 bits (183), Expect = 2e-14
Identities = 43/125 (34%), Positives = 66/125 (52%)
Frame = -2
Query: 485 DAEETPRXXXXXKPVITETTDKKGKKSIRQTKRENYLKRQAQAAELSKNQLKSQCLSYLS 306
DAE P + V+ K+ KK RQ RE L Q A S +L L YL
Sbjct: 53 DAE--PELSPEEQRVLERKLKKERKKEERQRLREAGLVAQHPPARRSGAEL---ALDYLC 107
Query: 305 QWKHDKQNWKFMKVKQLWLLKNKFSTNLVPDESWQTLIEYFESAKGNVRTLLLEDAKKVI 126
+W +NW+F K +Q WLL + + ++ VPDE + TL+ Y E +G R L ++ A+ ++
Sbjct: 108 RWAQKHKNWRFQKTRQTWLLLHMYDSDKVPDEHFSTLLAYLEGLQGRARELTVQKAEALM 167
Query: 125 KQMDE 111
+++DE
Sbjct: 168 RELDE 172
>AF495721-1|AAQ06675.1| 194|Homo sapiens unknown protein.
Length = 194
Score = 77.8 bits (183), Expect = 2e-14
Identities = 43/125 (34%), Positives = 66/125 (52%)
Frame = -2
Query: 485 DAEETPRXXXXXKPVITETTDKKGKKSIRQTKRENYLKRQAQAAELSKNQLKSQCLSYLS 306
DAE P + V+ K+ KK RQ RE L Q A S +L L YL
Sbjct: 53 DAE--PELSPEEQRVLERKLKKERKKEERQRLREAGLVAQHPPARRSGAEL---ALDYLC 107
Query: 305 QWKHDKQNWKFMKVKQLWLLKNKFSTNLVPDESWQTLIEYFESAKGNVRTLLLEDAKKVI 126
+W +NW+F K +Q WLL + + ++ VPDE + TL+ Y E +G R L ++ A+ ++
Sbjct: 108 RWAQKHKNWRFQKTRQTWLLLHMYDSDKVPDEHFSTLLAYLEGLQGRARELTVQKAEALM 167
Query: 125 KQMDE 111
+++DE
Sbjct: 168 RELDE 172
>BC032435-1|AAH32435.1| 716|Homo sapiens RABEP1 protein protein.
Length = 716
Score = 33.1 bits (72), Expect = 0.63
Identities = 25/111 (22%), Positives = 56/111 (50%), Gaps = 3/111 (2%)
Frame = -2
Query: 413 KKSIRQTKRENYLKRQAQAAELSKNQLKSQCLSYLSQWK--HDKQNWKFMKVKQLWLLKN 240
++ + + + E L+ + + A+ +L+S + + DK K+K+L K
Sbjct: 158 RRRLSEGQEEENLENEMKKAQEDAEKLRSVVMPMEKEIAALKDKLTEAEDKIKELEASKV 217
Query: 239 K-FSTNLVPDESWQTLIEYFESAKGNVRTLLLEDAKKVIKQMDEWTEKHGQ 90
K + L ++S +T +E + + +++L EDA+K+ K++ E ++H Q
Sbjct: 218 KELNHYLEAEKSCRTDLEMYVAVLNTQKSVLQEDAEKLRKELHEERQQHNQ 268
>BC130449-1|AAI30450.1| 1253|Homo sapiens PPP1R9A protein protein.
Length = 1253
Score = 31.5 bits (68), Expect = 1.9
Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Frame = -3
Query: 532 LNRNLRQLSDXTL-MTPMQKKHRVKRKRKSPLLPKQLIKKVKSRYDKQREKTILNVKPKL 356
L+++L SD L MT Q + VK+K K + + +K + + +KQREK + ++
Sbjct: 1173 LSQSLALSSDEALGMTASQDRAVVKKKLKEMKMSLEKARKAQEKMEKQREKLRRKEQEQM 1232
Query: 355 QNFQK 341
Q K
Sbjct: 1233 QRKSK 1237
>X62155-1|CAA44080.1| 223|Homo sapiens Myf4 protein protein.
Length = 223
Score = 29.5 bits (63), Expect = 7.8
Identities = 14/50 (28%), Positives = 26/50 (52%)
Frame = -3
Query: 481 QKKHRVKRKRKSPLLPKQLIKKVKSRYDKQREKTILNVKPKLQNFQKINS 332
+K V R+R + L K+ +KKV ++ + T+LN +L + + S
Sbjct: 75 RKSVSVDRRRAATLREKRRLKKVNEAFEALKRSTLLNPNQRLPKVEILRS 124
>X17651-1|CAA35641.1| 246|Homo sapiens protein ( Human Myf-4 mRNA
for myogenic determination factor. ).
Length = 246
Score = 29.5 bits (63), Expect = 7.8
Identities = 14/50 (28%), Positives = 26/50 (52%)
Frame = -3
Query: 481 QKKHRVKRKRKSPLLPKQLIKKVKSRYDKQREKTILNVKPKLQNFQKINS 332
+K V R+R + L K+ +KKV ++ + T+LN +L + + S
Sbjct: 75 RKSVSVDRRRAATLREKRRLKKVNEAFEALKRSTLLNPNQRLPKVEILRS 124
>BT007233-1|AAP35897.1| 224|Homo sapiens myogenin (myogenic factor
4) protein.
Length = 224
Score = 29.5 bits (63), Expect = 7.8
Identities = 14/50 (28%), Positives = 26/50 (52%)
Frame = -3
Query: 481 QKKHRVKRKRKSPLLPKQLIKKVKSRYDKQREKTILNVKPKLQNFQKINS 332
+K V R+R + L K+ +KKV ++ + T+LN +L + + S
Sbjct: 75 RKSVSVDRRRAATLREKRRLKKVNEAFEALKRSTLLNPNQRLPKVEILRS 124
>BC053899-1|AAH53899.1| 224|Homo sapiens myogenin (myogenic factor
4) protein.
Length = 224
Score = 29.5 bits (63), Expect = 7.8
Identities = 14/50 (28%), Positives = 26/50 (52%)
Frame = -3
Query: 481 QKKHRVKRKRKSPLLPKQLIKKVKSRYDKQREKTILNVKPKLQNFQKINS 332
+K V R+R + L K+ +KKV ++ + T+LN +L + + S
Sbjct: 75 RKSVSVDRRRAATLREKRRLKKVNEAFEALKRSTLLNPNQRLPKVEILRS 124
>AK128197-1|BAC87320.1| 161|Homo sapiens protein ( Homo sapiens
cDNA FLJ46325 fis, clone TESTI4043371. ).
Length = 161
Score = 29.5 bits (63), Expect = 7.8
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = +3
Query: 30 VSLFCCILFTVFFIYFLFITLTMFFCPFIHLFNDFFCIF 146
+S F + F+ FF FL L+ FF P LF+ +F
Sbjct: 72 LSFFLFLSFSFFFFPFLSFFLSFFFFPSFFLFSFLLSLF 110
>AF050501-1|AAG22573.1| 215|Homo sapiens myogenin protein.
Length = 215
Score = 29.5 bits (63), Expect = 7.8
Identities = 14/50 (28%), Positives = 26/50 (52%)
Frame = -3
Query: 481 QKKHRVKRKRKSPLLPKQLIKKVKSRYDKQREKTILNVKPKLQNFQKINS 332
+K V R+R + L K+ +KKV ++ + T+LN +L + + S
Sbjct: 75 RKSVSVDRRRAATLREKRRLKKVNEAFEALKRSTLLNPNQRLPKVEILRS 124
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 62,385,306
Number of Sequences: 237096
Number of extensions: 1115639
Number of successful extensions: 4035
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3769
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4034
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 5216942984
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -