Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P05_pT_B10
(534 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 prote... 33 0.13
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 33 0.13
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 33 0.13
Z81533-4|CAB04338.1| 280|Caenorhabditis elegans Hypothetical pr... 31 0.52
Z92815-5|CAH10781.1| 313|Caenorhabditis elegans Hypothetical pr... 30 0.91
Z81547-6|CAB04462.2| 313|Caenorhabditis elegans Hypothetical pr... 30 0.91
AC006677-3|AAF39952.2| 298|Caenorhabditis elegans Serpentine re... 30 0.91
Z81039-8|CAB02779.2| 225|Caenorhabditis elegans Hypothetical pr... 29 2.1
Z68113-1|CAA92151.1| 321|Caenorhabditis elegans Hypothetical pr... 29 2.1
Z49071-6|CAA88876.2| 292|Caenorhabditis elegans Hypothetical pr... 29 2.1
U56963-8|AAB38121.1| 155|Caenorhabditis elegans Hypothetical pr... 29 2.8
AF078790-10|AAC26931.1| 197|Caenorhabditis elegans Hypothetical... 28 3.7
Z69904-1|CAA93777.1| 420|Caenorhabditis elegans Hypothetical pr... 28 4.8
U97192-2|AAO38678.1| 622|Caenorhabditis elegans Hypothetical pr... 28 4.8
U97192-1|AAB52434.2| 986|Caenorhabditis elegans Hypothetical pr... 28 4.8
U80032-5|AAB53878.1| 552|Caenorhabditis elegans Hypothetical pr... 28 4.8
U50301-12|AAB37053.2| 486|Caenorhabditis elegans Hypothetical p... 28 4.8
U39852-8|AAK39261.2| 113|Caenorhabditis elegans Hypothetical pr... 28 4.8
U18385-1|AAA62505.1| 276|Caenorhabditis elegans collagen protein. 28 4.8
AL161712-10|CAC35900.1| 533|Caenorhabditis elegans Hypothetical... 28 4.8
U40798-4|AAA81474.2| 430|Caenorhabditis elegans Hypothetical pr... 27 6.4
AF125462-4|AAD12859.1| 1219|Caenorhabditis elegans Heavy chain, ... 27 6.4
AF125462-3|AAT68888.1| 1144|Caenorhabditis elegans Heavy chain, ... 27 6.4
Z81457-5|CAB03817.2| 584|Caenorhabditis elegans Hypothetical pr... 27 8.5
>AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 protein
protein.
Length = 10578
Score = 33.1 bits (72), Expect = 0.13
Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 5/85 (5%)
Frame = -3
Query: 487 PMQKKHRVKRKRKSPLLPKQLIKKVKSRYDKQREKTILNVKPKLQNFQKINSNLSVSAIF 308
P KKH +K+K+K K +K+ + Q EKT+ ++KP++ ++ SN S IF
Sbjct: 8575 PKAKKH-LKKKKKHHKKEKIAVKETE-----QDEKTVSHLKPEISGMERKRSNSGSSDIF 8628
Query: 307 -----PSGNMTNKTGSS*KLNSYGY 248
+G + T + LN Y Y
Sbjct: 8629 VDVDIEAGEESIHTDALVDLNFYDY 8653
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 33.1 bits (72), Expect = 0.13
Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 5/85 (5%)
Frame = -3
Query: 487 PMQKKHRVKRKRKSPLLPKQLIKKVKSRYDKQREKTILNVKPKLQNFQKINSNLSVSAIF 308
P KKH +K+K+K K +K+ + Q EKT+ ++KP++ ++ SN S IF
Sbjct: 8595 PKAKKH-LKKKKKHHKKEKIAVKETE-----QDEKTVSHLKPEISGMERKRSNSGSSDIF 8648
Query: 307 -----PSGNMTNKTGSS*KLNSYGY 248
+G + T + LN Y Y
Sbjct: 8649 VDVDIEAGEESIHTDALVDLNFYDY 8673
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 33.1 bits (72), Expect = 0.13
Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 5/85 (5%)
Frame = -3
Query: 487 PMQKKHRVKRKRKSPLLPKQLIKKVKSRYDKQREKTILNVKPKLQNFQKINSNLSVSAIF 308
P KKH +K+K+K K +K+ + Q EKT+ ++KP++ ++ SN S IF
Sbjct: 8595 PKAKKH-LKKKKKHHKKEKIAVKETE-----QDEKTVSHLKPEISGMERKRSNSGSSDIF 8648
Query: 307 -----PSGNMTNKTGSS*KLNSYGY 248
+G + T + LN Y Y
Sbjct: 8649 VDVDIEAGEESIHTDALVDLNFYDY 8673
>Z81533-4|CAB04338.1| 280|Caenorhabditis elegans Hypothetical
protein F36G9.7 protein.
Length = 280
Score = 31.1 bits (67), Expect = 0.52
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +3
Query: 60 VFFIYFLFITLTMFFCPFIHLFNDFFCIFKQ*C 158
++ IYF F+ L ++FC HLF+ F + C
Sbjct: 182 LYSIYFGFLALFVYFCKIHHLFSSIFNLIVNFC 214
>Z92815-5|CAH10781.1| 313|Caenorhabditis elegans Hypothetical
protein F53F8.2 protein.
Length = 313
Score = 30.3 bits (65), Expect = 0.91
Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
Frame = +3
Query: 12 CHFIRFVSLFC-CILFT--VFFIYFLFITLTMFFCPFIHLFNDF 134
C+ + V FC +LFT + F+ +FI +T FC +I++ DF
Sbjct: 40 CNMLICVCCFCDLLLFTDIIAFVVSMFIPITQEFCFYINIPADF 83
>Z81547-6|CAB04462.2| 313|Caenorhabditis elegans Hypothetical
protein F53F8.2 protein.
Length = 313
Score = 30.3 bits (65), Expect = 0.91
Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
Frame = +3
Query: 12 CHFIRFVSLFC-CILFT--VFFIYFLFITLTMFFCPFIHLFNDF 134
C+ + V FC +LFT + F+ +FI +T FC +I++ DF
Sbjct: 40 CNMLICVCCFCDLLLFTDIIAFVVSMFIPITQEFCFYINIPADF 83
>AC006677-3|AAF39952.2| 298|Caenorhabditis elegans Serpentine
receptor, class x protein28 protein.
Length = 298
Score = 30.3 bits (65), Expect = 0.91
Identities = 11/43 (25%), Positives = 24/43 (55%)
Frame = +3
Query: 15 HFIRFVSLFCCILFTVFFIYFLFITLTMFFCPFIHLFNDFFCI 143
HF+ ++ C + +++ + + T+F+ FI +F+ FCI
Sbjct: 94 HFLNALNRCCALFMPLWYTHIFSNSKTVFYRNFIWIFSIIFCI 136
>Z81039-8|CAB02779.2| 225|Caenorhabditis elegans Hypothetical
protein C25D7.10 protein.
Length = 225
Score = 29.1 bits (62), Expect = 2.1
Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = +3
Query: 33 SLFCCILFTVF-FIYFLFITLTMFFCPFIHLFNDFF 137
S+F IL ++F F YF +TL+ +IH N FF
Sbjct: 168 SIFLQILLSIFVFPYFEVVTLSTIISFYIHFNNAFF 203
>Z68113-1|CAA92151.1| 321|Caenorhabditis elegans Hypothetical
protein E03G2.1 protein.
Length = 321
Score = 29.1 bits (62), Expect = 2.1
Identities = 15/48 (31%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
Frame = +3
Query: 24 RFVSLFCCILFTVFFIYF--LFITLTMFFCPFIHLFNDFFCIFKQ*CA 161
RF+ LFC ++ +IY L+I + FN FC+ + CA
Sbjct: 77 RFLPLFCAYIYIYIYIYVYGLYIFIAQSHKQIFSKFNIIFCLLEN-CA 123
>Z49071-6|CAA88876.2| 292|Caenorhabditis elegans Hypothetical
protein T22C8.4 protein.
Length = 292
Score = 29.1 bits (62), Expect = 2.1
Identities = 16/61 (26%), Positives = 29/61 (47%)
Frame = -2
Query: 515 AVKRXHVDDSDAEETPRXXXXXKPVITETTDKKGKKSIRQTKRENYLKRQAQAAELSKNQ 336
A KR +D S + + + +K+ K+ R KRE LK++++ A KN+
Sbjct: 86 APKRRRIDKSSTSSEAKIQRMED-AMKKKLEKEQKEKARLKKREETLKKKSETAAAKKNK 144
Query: 335 L 333
+
Sbjct: 145 I 145
>U56963-8|AAB38121.1| 155|Caenorhabditis elegans Hypothetical
protein T13A10.1 protein.
Length = 155
Score = 28.7 bits (61), Expect = 2.8
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = -3
Query: 487 PMQKKHRVKRKRKSPLLPKQLIKKVKSRYDKQREKTILNVKPKLQN 350
P ++K ++K + K P PK+ K +++E T VKPK Q+
Sbjct: 70 PKKEKSKMKSEVKEPDAPKKENDKTSEDKKEKQEDTFDAVKPKQQD 115
>AF078790-10|AAC26931.1| 197|Caenorhabditis elegans Hypothetical
protein F36H12.5 protein.
Length = 197
Score = 28.3 bits (60), Expect = 3.7
Identities = 17/46 (36%), Positives = 26/46 (56%)
Frame = -3
Query: 487 PMQKKHRVKRKRKSPLLPKQLIKKVKSRYDKQREKTILNVKPKLQN 350
P ++K ++K + K P PK+ K + +KQ E T VKPK Q+
Sbjct: 70 PKKEKSKMKSEVKEPDAPKKDDKTSDEKKEKQ-EDTFDAVKPKQQD 114
>Z69904-1|CAA93777.1| 420|Caenorhabditis elegans Hypothetical
protein ZK20.1 protein.
Length = 420
Score = 27.9 bits (59), Expect = 4.8
Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = -3
Query: 448 SPLLPKQLIKKVKS-RYDKQREKTILNVKPKLQNFQKINSNL 326
SP+LP+Q+ K+KS D+ +E N Q F K+NS+L
Sbjct: 142 SPVLPEQISAKIKSDLLDQLKEAACSNA---TQFFSKLNSHL 180
>U97192-2|AAO38678.1| 622|Caenorhabditis elegans Hypothetical
protein C01F4.2b protein.
Length = 622
Score = 27.9 bits (59), Expect = 4.8
Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 6/45 (13%)
Frame = -2
Query: 311 LSQWKHDKQNWKFMKVKQLWLLKNKF------STNLVPDESWQTL 195
LS + WK+ K LW LK K+ ST+ D +W++L
Sbjct: 255 LSASSSHSEGWKYSSQKLLWKLKPKYAYSHASSTSSSTDSAWKSL 299
>U97192-1|AAB52434.2| 986|Caenorhabditis elegans Hypothetical
protein C01F4.2a protein.
Length = 986
Score = 27.9 bits (59), Expect = 4.8
Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 6/45 (13%)
Frame = -2
Query: 311 LSQWKHDKQNWKFMKVKQLWLLKNKF------STNLVPDESWQTL 195
LS + WK+ K LW LK K+ ST+ D +W++L
Sbjct: 255 LSASSSHSEGWKYSSQKLLWKLKPKYAYSHASSTSSSTDSAWKSL 299
>U80032-5|AAB53878.1| 552|Caenorhabditis elegans Hypothetical
protein C32E12.1 protein.
Length = 552
Score = 27.9 bits (59), Expect = 4.8
Identities = 14/35 (40%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Frame = -3
Query: 484 MQKKHRVKRKRKSPLLPKQLIKK-VKSRYDKQREK 383
+ KK K K +SP+ PK++ K VK++ DK+ +K
Sbjct: 3 VHKKTEKKTKTESPVKPKKVASKHVKNKKDKKDKK 37
>U50301-12|AAB37053.2| 486|Caenorhabditis elegans Hypothetical
protein F20D6.10 protein.
Length = 486
Score = 27.9 bits (59), Expect = 4.8
Identities = 16/64 (25%), Positives = 32/64 (50%)
Frame = -3
Query: 523 NLRQLSDXTLMTPMQKKHRVKRKRKSPLLPKQLIKKVKSRYDKQREKTILNVKPKLQNFQ 344
+LR++S + H + K SP +PK+ K S ++ +KT + +P L+ +
Sbjct: 365 DLRRMSSTKEHHHKEHIHHAESK-DSPNMPKRYAKLKSSESSRESQKTSVTRRPSLKKNR 423
Query: 343 KINS 332
++S
Sbjct: 424 SVDS 427
>U39852-8|AAK39261.2| 113|Caenorhabditis elegans Hypothetical
protein K10C2.6 protein.
Length = 113
Score = 27.9 bits (59), Expect = 4.8
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = +3
Query: 18 FIRFVSLFCCILFTVFFIYFLFITLTMFFCPFIHLFN 128
+I FVS + CI F+ F YF F T F F++ N
Sbjct: 2 YIFFVSNYLCISFSPEFPYFFFETYHKNFEIFLNFTN 38
>U18385-1|AAA62505.1| 276|Caenorhabditis elegans collagen protein.
Length = 276
Score = 27.9 bits (59), Expect = 4.8
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = +3
Query: 12 CHFIRFVSLFCCILFTVFFIYFLFITLTMFFCPFIHLFNDFF 137
C F +F ++ C+LF FF+ F + +F F +L N FF
Sbjct: 229 CLFYKFSNIPNCVLFLHFFLNCNFTCKSKYF-SFSNLANFFF 269
>AL161712-10|CAC35900.1| 533|Caenorhabditis elegans Hypothetical
protein Y66D12A.13 protein.
Length = 533
Score = 27.9 bits (59), Expect = 4.8
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +3
Query: 15 HFIRFVSLFCCILFTVFFIYF 77
HFI + CC +F +FFIYF
Sbjct: 384 HFITVSFIMCC-MFGIFFIYF 403
>U40798-4|AAA81474.2| 430|Caenorhabditis elegans Hypothetical
protein R13A1.3 protein.
Length = 430
Score = 27.5 bits (58), Expect = 6.4
Identities = 9/36 (25%), Positives = 20/36 (55%)
Frame = +3
Query: 30 VSLFCCILFTVFFIYFLFITLTMFFCPFIHLFNDFF 137
+ +FC + F+ +F+ + F+ ++ C +FN F
Sbjct: 303 LGIFCPLSFSFYFLSYAFLQTSLIACSKCSIFNLLF 338
>AF125462-4|AAD12859.1| 1219|Caenorhabditis elegans Heavy chain,
unconventional myosinprotein 8, isoform a protein.
Length = 1219
Score = 27.5 bits (58), Expect = 6.4
Identities = 18/90 (20%), Positives = 40/90 (44%)
Frame = -2
Query: 347 SKNQLKSQCLSYLSQWKHDKQNWKFMKVKQLWLLKNKFSTNLVPDESWQTLIEYFESAKG 168
+KN + C+++ ++ + N + ++ +Q K + + Q IE FE
Sbjct: 490 AKNSFEQFCINFCNEKLQNFFNQRILREEQELYEKEGLNVRKIEFIDNQDCIELFELKGN 549
Query: 167 NVRTLLLEDAKKVIKQMDEWTEKHGQSNKQ 78
+ LL E+AK +T++ + N++
Sbjct: 550 GLFDLLDEEAKFPTSNYKSFTKRAHEENRK 579
>AF125462-3|AAT68888.1| 1144|Caenorhabditis elegans Heavy chain,
unconventional myosinprotein 8, isoform b protein.
Length = 1144
Score = 27.5 bits (58), Expect = 6.4
Identities = 18/90 (20%), Positives = 40/90 (44%)
Frame = -2
Query: 347 SKNQLKSQCLSYLSQWKHDKQNWKFMKVKQLWLLKNKFSTNLVPDESWQTLIEYFESAKG 168
+KN + C+++ ++ + N + ++ +Q K + + Q IE FE
Sbjct: 490 AKNSFEQFCINFCNEKLQNFFNQRILREEQELYEKEGLNVRKIEFIDNQDCIELFELKGN 549
Query: 167 NVRTLLLEDAKKVIKQMDEWTEKHGQSNKQ 78
+ LL E+AK +T++ + N++
Sbjct: 550 GLFDLLDEEAKFPTSNYKSFTKRAHEENRK 579
>Z81457-5|CAB03817.2| 584|Caenorhabditis elegans Hypothetical
protein C01G12.7 protein.
Length = 584
Score = 27.1 bits (57), Expect = 8.5
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +3
Query: 15 HFIRFVSLFCCILFTVFFIYFLFITLTMFFC 107
H R + L CC +F ++ + L L +FFC
Sbjct: 324 HGDRELLLMCCTVFGIYELSILLPQLLIFFC 354
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,490,937
Number of Sequences: 27780
Number of extensions: 211157
Number of successful extensions: 1306
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1102
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1305
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1060113800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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