Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P05_pT_B06
(339 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_02_0593 + 19078264-19078609,19078724-19082256 52 1e-07
02_05_0473 + 29319824-29322511,29322659-29322820,29324133-293242... 51 2e-07
09_03_0040 + 11816056-11819069,11819837-11820428 50 4e-07
01_07_0036 + 40647046-40647100,40647120-40647571,40648135-406482... 46 6e-06
09_01_0178 - 2548611-2548670,2549816-2549918,2549993-2550096,255... 44 2e-05
01_06_1093 + 34471262-34471334,34474526-34476759 44 2e-05
09_02_0368 - 7984894-7984905,7985250-7985301,7985947-7985969,798... 42 1e-04
04_04_0680 - 27217563-27220088 40 5e-04
11_06_0313 + 22306497-22308938 38 0.003
09_06_0244 + 21822811-21823246,21823337-21823468,21823949-218240... 38 0.003
08_02_0824 + 21561699-21562415,21563294-21563362,21563424-215634... 37 0.005
12_01_0183 - 1350451-1350477,1350887-1350969,1350977-1352696,135... 33 0.057
11_01_0183 - 1440460-1440467,1440832-1440957,1440965-1442858 33 0.057
02_04_0206 + 20916063-20919669,20919816-20920014,20920935-209210... 33 0.057
04_03_0961 + 21263735-21263773,21264157-21264279,21266774-212668... 33 0.076
07_03_0154 + 14509979-14512033 30 0.40
03_02_0822 + 11530250-11530442,11530728-11531129,11531430-115318... 30 0.53
01_01_0832 - 6500139-6500333,6500610-6500875,6501494-6501815,650... 30 0.53
03_01_0045 - 379802-380605 28 2.1
03_01_0041 + 365253-366056 28 2.1
03_02_0371 + 7858170-7859624 27 2.8
03_01_0482 - 3686954-3688564 27 2.8
09_02_0167 + 5221910-5222516,5222826-5224642 27 3.8
09_04_0680 - 19401891-19402049,19402556-19402928,19403385-194034... 27 5.0
03_03_0122 - 14617879-14618871 27 5.0
03_01_0043 + 369916-370357,370475-370719 27 5.0
02_05_0665 - 30720842-30721003,30721290-30721448,30721555-307216... 27 5.0
01_03_0059 + 12109301-12109330,12109465-12109587,12109663-12110112 27 5.0
12_01_0014 + 105422-105520,105598-105725,105939-106101,106198-10... 26 6.6
11_01_0014 + 108647-108816,109704-109803,109891-110018,110232-11... 26 6.6
07_01_0596 + 4436363-4436938,4437164-4437385 26 6.6
02_01_0137 + 988442-988641,989088-989281,989369-989488,989594-98... 26 6.6
05_06_0126 - 25834129-25834214,25834595-25834658,25836201-258365... 26 8.7
02_01_0511 - 3706123-3706166,3706436-3706492,3706734-3706818,370... 26 8.7
02_01_0135 + 967172-967229,968316-968657,968936-969015,969063-96... 26 8.7
>08_02_0593 + 19078264-19078609,19078724-19082256
Length = 1292
Score = 52.0 bits (119), Expect = 1e-07
Identities = 25/70 (35%), Positives = 36/70 (51%), Gaps = 5/70 (7%)
Frame = -1
Query: 336 MNHSCEASAAAVRVFTRHRDXRLPLVVLFATRDIHPGEPLTFDYGDKFWAI-----KAKW 172
+NHSC + A V H D R+P ++ FA +I P + LT+DY K + + K
Sbjct: 1218 INHSCSPNLYAQNVLWDHDDQRVPHIMFFAAENIPPLQELTYDYNYKIGEVRDLNGRVKV 1277
Query: 171 MRCECGAPDC 142
C CG+P C
Sbjct: 1278 KDCHCGSPQC 1287
>02_05_0473 + 29319824-29322511,29322659-29322820,29324133-29324249,
29324360-29324469,29324504-29324540,29324696-29324862,
29325002-29325089,29325163-29325270
Length = 1158
Score = 51.2 bits (117), Expect = 2e-07
Identities = 25/66 (37%), Positives = 35/66 (53%)
Frame = -1
Query: 336 MNHSCEASAAAVRVFTRHRDXRLPLVVLFATRDIHPGEPLTFDYGDKFWAIKAKWMRCEC 157
+NHSC + + V +D +L + LFA +DI GE L +DYG K + C C
Sbjct: 1091 INHSCSPNLSTRLVSVESKDCQLAHIGLFANQDILMGEELAYDYGQKL--LPGDGCPCHC 1148
Query: 156 GAPDCR 139
GA +CR
Sbjct: 1149 GAKNCR 1154
>09_03_0040 + 11816056-11819069,11819837-11820428
Length = 1201
Score = 50.4 bits (115), Expect = 4e-07
Identities = 28/70 (40%), Positives = 37/70 (52%), Gaps = 5/70 (7%)
Frame = -1
Query: 336 MNHSCEASAAAVRVFTRHRDXRLPLVVLFATRDIHPGEPLTFDYG-----DKFWAIKAKW 172
+NHSC + A V H D + P ++ FAT +I P + LT+DY DK K K
Sbjct: 1129 INHSCSPNLYAQNVLWDHDDMKKPHIMFFATENIPPLQELTYDYNYGKVEDKNGKEKVK- 1187
Query: 171 MRCECGAPDC 142
C CG+PDC
Sbjct: 1188 -PCFCGSPDC 1196
>01_07_0036 +
40647046-40647100,40647120-40647571,40648135-40648257,
40648407-40648461,40648613-40648722,40649352-40649531,
40650003-40650101,40651182-40651280,40652195-40652289,
40652290-40652378,40652739-40652901,40653299-40653404,
40655647-40655829,40656059-40656286,40656373-40656486
Length = 716
Score = 46.4 bits (105), Expect = 6e-06
Identities = 26/71 (36%), Positives = 36/71 (50%), Gaps = 5/71 (7%)
Frame = -1
Query: 336 MNHSCEASAAAVRVFTRHRDXRLPLVVLFATRDIHPGEPLTFDYGDKFWAI-----KAKW 172
+NHSCE + V + H D +L V LFA I P + L++DYG ++
Sbjct: 642 INHSCEPNLFVQCVLSSHNDVKLAKVTLFAADTILPLQELSYDYGYVLDSVVGPDGNIVK 701
Query: 171 MRCECGAPDCR 139
+ C CGAP CR
Sbjct: 702 LPCFCGAPYCR 712
>09_01_0178 - 2548611-2548670,2549816-2549918,2549993-2550096,
2550893-2550988,2551418-2551482,2551558-2551591,
2552469-2552540,2552567-2552644,2553416-2553477,
2554267-2554530,2555057-2555246,2555432-2555500,
2555613-2555669,2555746-2555846,2556029-2556146,
2556225-2556272,2556362-2556487,2556960-2557118,
2558119-2558216,2558324-2558416,2559741-2559937,
2560231-2560354,2561121-2561334,2561773-2561830,
2561955-2562433
Length = 1022
Score = 44.4 bits (100), Expect = 2e-05
Identities = 26/66 (39%), Positives = 39/66 (59%)
Frame = -1
Query: 336 MNHSCEASAAAVRVFTRHRDXRLPLVVLFATRDIHPGEPLTFDYGDKFWAIKAKWMRCEC 157
+NHSCE + + RV + D +++FA RDI+P E LT+DY +F + + + C C
Sbjct: 929 INHSCEPNCYS-RVISVLGDEH---IIIFAKRDINPWEELTYDY--RFVSSDQR-LPCYC 981
Query: 156 GAPDCR 139
G P CR
Sbjct: 982 GFPKCR 987
>01_06_1093 + 34471262-34471334,34474526-34476759
Length = 768
Score = 44.4 bits (100), Expect = 2e-05
Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Frame = -1
Query: 336 MNHSCEASAAAVRVFTRHRDXRLPLVVLFATRDIHPGEPLTFDYGD---KFWAIKAKWMR 166
MNHSC + V H + P ++ FA + I P LT+DYGD + + ++
Sbjct: 696 MNHSCNPNTFWQPVQFDHGEDGYPHIMFFALKHIPPMTELTYDYGDIGCESRGVGSRAKN 755
Query: 165 CECGAPDCR 139
C CG+ +CR
Sbjct: 756 CLCGSSNCR 764
>09_02_0368 -
7984894-7984905,7985250-7985301,7985947-7985969,
7987006-7987071,7987155-7987206,7987617-7987820,
7987937-7988017,7988103-7988236
Length = 207
Score = 41.9 bits (94), Expect = 1e-04
Identities = 27/66 (40%), Positives = 37/66 (56%)
Frame = -1
Query: 336 MNHSCEASAAAVRVFTRHRDXRLPLVVLFATRDIHPGEPLTFDYGDKFWAIKAKWMRCEC 157
+NHSCE + ++ +T + R V +FA RDI GE LT+DY KF A C C
Sbjct: 32 INHSCEPNTE-MQKWTVEGETR---VGIFALRDIKTGEELTYDY--KFVQFGAD-QDCHC 84
Query: 156 GAPDCR 139
G+ +CR
Sbjct: 85 GSSNCR 90
>04_04_0680 - 27217563-27220088
Length = 841
Score = 39.9 bits (89), Expect = 5e-04
Identities = 21/70 (30%), Positives = 33/70 (47%), Gaps = 5/70 (7%)
Frame = -1
Query: 336 MNHSCEASAAAVRVFTRHRDXRLPLVVLFATRDIHPGEPLTFDYGDKFWAI-----KAKW 172
+NHSC + A V H D +P ++ FA DI P + L++ Y + K
Sbjct: 767 INHSCTPNLYAQNVLYDHDDKSVPHIMFFACEDIPPRQELSYHYNYTIDQVHDANGNIKK 826
Query: 171 MRCECGAPDC 142
+C CG+ +C
Sbjct: 827 KKCLCGSIEC 836
>11_06_0313 + 22306497-22308938
Length = 813
Score = 37.5 bits (83), Expect = 0.003
Identities = 18/45 (40%), Positives = 22/45 (48%)
Frame = -1
Query: 336 MNHSCEASAAAVRVFTRHRDXRLPLVVLFATRDIHPGEPLTFDYG 202
MNHSC + V H D P + FA + I P LT+DYG
Sbjct: 737 MNHSCSPNVFWQPVLYDHGDEGYPHIAFFAIKHIPPMTELTYDYG 781
>09_06_0244 + 21822811-21823246,21823337-21823468,21823949-21824037,
21824135-21824224,21825033-21825603,21826097-21826734,
21826978-21827098,21827223-21827337,21828234-21829723,
21829830-21829901,21830151-21830196,21830413-21830515,
21830591-21830674,21831035-21831475,21831651-21831746,
21831896-21832045,21832131-21832274,21832414-21832527,
21832621-21832803,21832901-21832945,21833058-21833192
Length = 1764
Score = 37.5 bits (83), Expect = 0.003
Identities = 18/44 (40%), Positives = 26/44 (59%)
Frame = -1
Query: 336 MNHSCEASAAAVRVFTRHRDXRLPLVVLFATRDIHPGEPLTFDY 205
+NHSC+ + A + R+ VV FA R I+PGE +T+DY
Sbjct: 1700 INHSCQPNCVAKIISVRNEKK----VVFFAERHINPGEEITYDY 1739
>08_02_0824 +
21561699-21562415,21563294-21563362,21563424-21563459,
21564533-21564600,21565259-21565277,21565662-21565763,
21566173-21566288,21566501-21566595,21568093-21568264,
21568413-21568493,21569732-21569801,21570106-21570132
Length = 523
Score = 36.7 bits (81), Expect = 0.005
Identities = 23/65 (35%), Positives = 36/65 (55%)
Frame = -1
Query: 333 NHSCEASAAAVRVFTRHRDXRLPLVVLFATRDIHPGEPLTFDYGDKFWAIKAKWMRCECG 154
NHSCE + ++ + + RL + FA++ I GEPLT+DY +F + C CG
Sbjct: 453 NHSCEPNCQ-LQKWQVNGKTRLGV---FASKAIEVGEPLTYDY--RFEQHYGPEIECFCG 506
Query: 153 APDCR 139
A +C+
Sbjct: 507 AQNCQ 511
>12_01_0183 -
1350451-1350477,1350887-1350969,1350977-1352696,
1354258-1354428,1355892-1355939
Length = 682
Score = 33.1 bits (72), Expect = 0.057
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = -1
Query: 336 MNHSCEASAAAVRVFTRHRDXRLPLVVLFATRDIHPGEPLTFDY 205
+NHSC + V H D P ++ FA I P LT+DY
Sbjct: 603 LNHSCSPNLLWQAVQYDHGDDSYPHIMFFAMEHIPPMTELTYDY 646
>11_01_0183 - 1440460-1440467,1440832-1440957,1440965-1442858
Length = 675
Score = 33.1 bits (72), Expect = 0.057
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = -1
Query: 336 MNHSCEASAAAVRVFTRHRDXRLPLVVLFATRDIHPGEPLTFDY 205
+NHSC + V H D P ++ FA I P LT+DY
Sbjct: 588 LNHSCSPNLLWQAVQYDHGDDSYPHIMFFAMEHIPPMTELTYDY 631
>02_04_0206 + 20916063-20919669,20919816-20920014,20920935-20921074,
20921184-20921263,20922759-20922875,20923089-20923136,
20923509-20923601,20923881-20923958,20924114-20924218,
20924543-20925212,20925253-20925350,20925887-20925963,
20926035-20926117,20926208-20926287,20927060-20927139,
20927698-20927743,20928709-20929181,20929234-20929579
Length = 2139
Score = 33.1 bits (72), Expect = 0.057
Identities = 18/44 (40%), Positives = 23/44 (52%)
Frame = -1
Query: 255 LFATRDIHPGEPLTFDYGDKFWAIKAKWMRCECGAPDCRYPVKG 124
+FA R+I GE LTFDY + A +C CG CR + G
Sbjct: 1481 IFAMRNIKKGEELTFDY-NYVRVSGAAPQKCFCGTAKCRGYIGG 1523
>04_03_0961 +
21263735-21263773,21264157-21264279,21266774-21266847,
21266939-21267095,21267554-21267694,21267739-21267823,
21268810-21268903,21269041-21269239,21269515-21269549,
21270076-21270631,21270722-21270882,21271704-21271718,
21273078-21273330,21273439-21273562,21273688-21273788,
21274870-21274938,21275060-21275191,21275270-21275404,
21275489-21275551,21275636-21275881,21276007-21276285
Length = 1026
Score = 32.7 bits (71), Expect = 0.076
Identities = 21/65 (32%), Positives = 34/65 (52%)
Frame = -1
Query: 336 MNHSCEASAAAVRVFTRHRDXRLPLVVLFATRDIHPGEPLTFDYGDKFWAIKAKWMRCEC 157
+NHSC+ + R + + R V +FA +DI G L++DY +++ +RC C
Sbjct: 234 INHSCQPNCET-RKWNVLGEVR---VGIFAKQDIPIGTELSYDYNFEWFG--GAMVRCLC 287
Query: 156 GAPDC 142
GA C
Sbjct: 288 GAGSC 292
>07_03_0154 + 14509979-14512033
Length = 684
Score = 30.3 bits (65), Expect = 0.40
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = -1
Query: 333 NHSCEASAAAVRVFTRHRDXRLPLVVLFATRDIHPGEPLTFDYG 202
+HSC + V H + P +++FA +I P L+ DYG
Sbjct: 630 SHSCSPNVFVQFVLFDHYNAAYPHLMIFAMENIPPLRELSIDYG 673
>03_02_0822 +
11530250-11530442,11530728-11531129,11531430-11531878,
11533568-11533744
Length = 406
Score = 29.9 bits (64), Expect = 0.53
Identities = 15/49 (30%), Positives = 23/49 (46%)
Frame = -1
Query: 285 HRDXRLPLVVLFATRDIHPGEPLTFDYGDKFWAIKAKWMRCECGAPDCR 139
H D P + FA ++I P LT+DYG + + C C + C+
Sbjct: 354 HGDEGYPHIAFFAIKNIPPMTELTYDYGQSNGSGCRRPKICICQSHMCK 402
>01_01_0832 - 6500139-6500333,6500610-6500875,6501494-6501815,
6501915-6502156,6502229-6502457,6503020-6503184,
6503279-6503605,6504150-6504191,6504333-6504400,
6504748-6504934,6506249-6506311,6506748-6506790,
6506919-6507019,6507110-6507184,6507359-6507445,
6507593-6507682,6507906-6507992,6508585-6508783,
6509113-6509177,6509502-6509606,6509726-6509871,
6510100-6510224,6510335-6510437,6510482-6510596,
6510734-6510869,6511298-6511387,6511484-6511578,
6511698-6511763,6511868-6511936,6512034-6512147,
6512241-6512448,6512545-6512600,6512818-6513552
Length = 1671
Score = 29.9 bits (64), Expect = 0.53
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = -1
Query: 336 MNHSCEASAAAVRVFTRHRDXRLPLVVLFATRDIHPGEPLTFDY 205
+NHSC + A R+ + + ++L A RD+ GE LT+DY
Sbjct: 919 INHSCMPNCYA-RIMSVGDEKSQ--IILIAKRDVSAGEELTYDY 959
>03_01_0045 - 379802-380605
Length = 267
Score = 27.9 bits (59), Expect = 2.1
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -1
Query: 237 IHPGEPLTFDYGDKFWAIKAKWMRCECGA 151
+ PG +T YGDK+ KA W GA
Sbjct: 27 VPPGPNITTSYGDKWLEAKATWYGAPKGA 55
>03_01_0041 + 365253-366056
Length = 267
Score = 27.9 bits (59), Expect = 2.1
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -1
Query: 237 IHPGEPLTFDYGDKFWAIKAKWMRCECGA 151
+ PG +T YGDK+ KA W GA
Sbjct: 27 VPPGPNITTSYGDKWLEAKATWYGAPKGA 55
>03_02_0371 + 7858170-7859624
Length = 484
Score = 27.5 bits (58), Expect = 2.8
Identities = 16/41 (39%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
Frame = -1
Query: 333 NHSCEASAAAVRVFTRHRDXRLP-LVVLFATRDIHPGEPLT 214
NH S A+R FT + P + F TRDI G P+T
Sbjct: 285 NHIYGLSLTALRFFTVYGPWGRPDMAYFFFTRDILAGRPIT 325
>03_01_0482 - 3686954-3688564
Length = 536
Score = 27.5 bits (58), Expect = 2.8
Identities = 22/74 (29%), Positives = 33/74 (44%), Gaps = 7/74 (9%)
Frame = -1
Query: 336 MNHSCEASAAAVRVFTRHRDXRLPLVVLFATRDIHPGEPLTFDYGD-------KFWAIKA 178
+NHSC +A V ++ A+RDI GE +TF Y D + A +A
Sbjct: 321 INHSCHPNARRTHVGDH--------AIVHASRDIKAGEEITFAYFDVLTPASKRREAARA 372
Query: 177 KWMRCECGAPDCRY 136
+ C+C CR+
Sbjct: 373 WGLECQCDR--CRF 384
>09_02_0167 + 5221910-5222516,5222826-5224642
Length = 807
Score = 27.1 bits (57), Expect = 3.8
Identities = 10/35 (28%), Positives = 19/35 (54%)
Frame = +3
Query: 33 NDFKIN*SLIIIIYNDNYIPVEFNYCRCYCPLSPD 137
N+ ++N + ++ + Y+P YC YC L P+
Sbjct: 304 NNPELNFVIAVLNLSFEYLPSNLKYCFLYCGLFPE 338
>09_04_0680 -
19401891-19402049,19402556-19402928,19403385-19403421,
19403587-19403667,19405215-19405280,19407453-19407948,
19408050-19408283,19408473-19408772,19409241-19409423,
19410412-19410414
Length = 643
Score = 26.6 bits (56), Expect = 5.0
Identities = 15/48 (31%), Positives = 23/48 (47%)
Frame = +1
Query: 100 LITVVVTAPFHRIPAVGSAALASHPLRFYCPKFVAVVKXERFSWVYVP 243
++TV A HR+ +GS LA F P V +V + S ++P
Sbjct: 557 VVTVAAVAQPHRVRVLGSICLAFSMAVFVAPMSVIMVVIKTKSAEFMP 604
>03_03_0122 - 14617879-14618871
Length = 330
Score = 26.6 bits (56), Expect = 5.0
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = +1
Query: 253 QDDERQTXVAVAGEHADGGRARLAAVVH 336
QDDERQ A A H GG A H
Sbjct: 30 QDDERQDHQAAAAVHGQGGGGGATAERH 57
>03_01_0043 + 369916-370357,370475-370719
Length = 228
Score = 26.6 bits (56), Expect = 5.0
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = -1
Query: 237 IHPGEPLTFDYGDKFWAIKAKWMRCECGA 151
+ PG +T YGDK+ +A W GA
Sbjct: 27 VPPGPNITASYGDKWLEARATWYGAAKGA 55
>02_05_0665 -
30720842-30721003,30721290-30721448,30721555-30721687,
30722042-30722227,30722377-30722906
Length = 389
Score = 26.6 bits (56), Expect = 5.0
Identities = 9/27 (33%), Positives = 13/27 (48%)
Frame = -1
Query: 192 WAIKAKWMRCECGAPDCRYPVKGGSNN 112
W KW+R P C+Y + GS +
Sbjct: 362 WTCITKWLRMHATCPLCKYNILKGSES 388
>01_03_0059 + 12109301-12109330,12109465-12109587,12109663-12110112
Length = 200
Score = 26.6 bits (56), Expect = 5.0
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +1
Query: 109 VVVTAPFHRIPAVGSAALASHPLRF 183
VV P+ A G+ ALA+HPL F
Sbjct: 24 VVGACPYISAAAAGAGALAAHPLPF 48
>12_01_0014 +
105422-105520,105598-105725,105939-106101,106198-106310,
106787-106825,107026-107109,107193-107241,107331-107422,
107680-107809,107906-107982,108058-109676,110024-110221,
110287-110825
Length = 1109
Score = 26.2 bits (55), Expect = 6.6
Identities = 12/24 (50%), Positives = 13/24 (54%), Gaps = 1/24 (4%)
Frame = -1
Query: 174 WMR-CECGAPDCRYPVKGGSNNDS 106
W+R CG PDC Y GS DS
Sbjct: 221 WLRNMTCGNPDCLYLHDVGSQEDS 244
>11_01_0014 +
108647-108816,109704-109803,109891-110018,110232-110394,
110491-110603,111080-111118,111319-111402,111486-111534,
111624-111715,111999-112128,112225-112301,112377-113995,
114348-114545,114635-115173
Length = 1166
Score = 26.2 bits (55), Expect = 6.6
Identities = 12/24 (50%), Positives = 13/24 (54%), Gaps = 1/24 (4%)
Frame = -1
Query: 174 WMR-CECGAPDCRYPVKGGSNNDS 106
W+R CG PDC Y GS DS
Sbjct: 278 WLRNMTCGNPDCLYLHDVGSQEDS 301
>07_01_0596 + 4436363-4436938,4437164-4437385
Length = 265
Score = 26.2 bits (55), Expect = 6.6
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = -1
Query: 243 RDIHPGEPLTFDYGDK 196
+D+H G P+TFDYG K
Sbjct: 23 KDLH-GSPMTFDYGRK 37
>02_01_0137 +
988442-988641,989088-989281,989369-989488,989594-989673,
990244-990510,990840-992458,992571-993327,993560-995506
Length = 1727
Score = 26.2 bits (55), Expect = 6.6
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +3
Query: 57 LIIIIYNDNYIPVEFNYCRCYCPLSP 134
L I+ + ++PV YC YC L P
Sbjct: 654 LAILKLSYEFLPVHLQYCFSYCSLFP 679
>05_06_0126 -
25834129-25834214,25834595-25834658,25836201-25836521,
25836912-25837040,25837118-25837177,25837251-25837548,
25837622-25837776,25837959-25838097,25838185-25838266,
25838337-25838455,25838537-25838664,25838810-25838983,
25839052-25839203,25839393-25839425,25840362-25841331,
25841412-25841537
Length = 1011
Score = 25.8 bits (54), Expect = 8.7
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = -1
Query: 246 TRDIHPGEPLTFDYGDKFWAIKAKWMRCECGAPD 145
TR + E + F +G FW + W+R + G D
Sbjct: 15 TRRMEEEEEVAFLFGMAFWRRHSGWLRMQFGPID 48
>02_01_0511 -
3706123-3706166,3706436-3706492,3706734-3706818,
3707424-3707472,3707566-3707639,3707775-3707849,
3708186-3708240,3708318-3708391,3708607-3708753,
3709419-3709493,3709527-3709648,3709749-3709929
Length = 345
Score = 25.8 bits (54), Expect = 8.7
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = -2
Query: 260 SSCSRPGTYTQENRSXLTTATNFGQ*KRSG 171
SSCS T TQE+ +T T + K SG
Sbjct: 132 SSCSSLSTSTQESEEDVTVGTLLTEAKNSG 161
>02_01_0135 +
967172-967229,968316-968657,968936-969015,969063-969698,
969819-971527,971563-972514,972821-973273,974303-974497
Length = 1474
Score = 25.8 bits (54), Expect = 8.7
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = +3
Query: 57 LIIIIYNDNYIPVEFNYCRCYCPLSP 134
L I+ ++ ++PV +C YC L P
Sbjct: 440 LAILKFSYEFLPVHLQHCFSYCSLFP 465
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,215,969
Number of Sequences: 37544
Number of extensions: 123352
Number of successful extensions: 367
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 359
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 363
length of database: 14,793,348
effective HSP length: 73
effective length of database: 12,052,636
effective search space used: 470052804
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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