Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P05_pT_B06
(339 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81485-2|CAB03974.2| 708|Caenorhabditis elegans Hypothetical pr... 48 2e-06
AF025454-7|AAC71154.3| 367|Caenorhabditis elegans Hypothetical ... 46 5e-06
Z83230-10|CAL22704.2| 714|Caenorhabditis elegans Hypothetical p... 45 1e-05
L07144-10|AAK21437.1| 1327|Caenorhabditis elegans Hypothetical p... 45 1e-05
AL021481-9|CAA16332.3| 714|Caenorhabditis elegans Hypothetical ... 45 1e-05
U37430-5|AAB52674.2| 389|Caenorhabditis elegans Set (trithorax/... 45 2e-05
Z81048-3|CAB02841.1| 407|Caenorhabditis elegans Hypothetical pr... 42 1e-04
AC006729-5|AAK84599.2| 568|Caenorhabditis elegans Hypothetical ... 40 5e-04
AF100669-3|AAK39266.1| 747|Caenorhabditis elegans Hypothetical ... 39 8e-04
Z82094-3|CAB05024.1| 2561|Caenorhabditis elegans Hypothetical pr... 38 0.001
Z81120-8|CAB03348.1| 2561|Caenorhabditis elegans Hypothetical pr... 38 0.001
AC024776-10|AAM97972.1| 159|Caenorhabditis elegans Set (trithor... 38 0.002
AC024776-9|AAK68462.1| 244|Caenorhabditis elegans Set (trithora... 38 0.002
AC006674-4|AAF39940.1| 402|Caenorhabditis elegans Hypothetical ... 35 0.013
U41508-1|AAG00027.3| 944|Caenorhabditis elegans Set (trithorax/... 35 0.017
AL021448-1|CAA16276.2| 898|Caenorhabditis elegans Hypothetical ... 30 0.37
AF233290-1|AAF62516.1| 898|Caenorhabditis elegans maternal-effe... 30 0.37
AF163019-1|AAD49324.1| 1312|Caenorhabditis elegans trithorax-rel... 30 0.37
AF039718-1|AAB96746.1| 1312|Caenorhabditis elegans Abnormal cell... 30 0.37
U51995-3|AAY86262.1| 174|Caenorhabditis elegans Hypothetical pr... 28 2.0
U00043-3|AAP82636.1| 105|Caenorhabditis elegans Set (trithorax/... 28 2.0
U00043-2|AAC77512.1| 242|Caenorhabditis elegans Set (trithorax/... 28 2.0
U41508-3|AAN39664.1| 317|Caenorhabditis elegans Set (trithorax/... 27 4.5
U41508-2|AAN39665.2| 552|Caenorhabditis elegans Set (trithorax/... 27 4.5
AJ871144-1|CAI38753.2| 476|Caenorhabditis elegans UDP-galactopy... 26 6.0
AF125442-8|AAD12787.2| 476|Caenorhabditis elegans Hypothetical ... 26 6.0
>Z81485-2|CAB03974.2| 708|Caenorhabditis elegans Hypothetical
protein C49F5.2 protein.
Length = 708
Score = 48.0 bits (109), Expect = 2e-06
Identities = 23/65 (35%), Positives = 33/65 (50%)
Frame = -1
Query: 333 NHSCEASAAAVRVFTRHRDXRLPLVVLFATRDIHPGEPLTFDYGDKFWAIKAKWMRCECG 154
NHSC + +R+F ++ F +DI PGEPLT DYG ++ + + RC C
Sbjct: 556 NHSCTPNMEPLRLFKEGFTPANMRMIFFTLKDIFPGEPLTLDYGSEYKVFRRQ--RCLCR 613
Query: 153 APDCR 139
CR
Sbjct: 614 TFACR 618
>AF025454-7|AAC71154.3| 367|Caenorhabditis elegans Hypothetical
protein F34D6.4 protein.
Length = 367
Score = 46.4 bits (105), Expect = 5e-06
Identities = 22/67 (32%), Positives = 33/67 (49%)
Frame = -1
Query: 336 MNHSCEASAAAVRVFTRHRDXRLPLVVLFATRDIHPGEPLTFDYGDKFWAIKAKWMRCEC 157
+NHSC + + + +L + F + I GE LT DYG+ +WA K C C
Sbjct: 295 INHSCAPNVKVANISWDYDKIQLIHMCFFTDKAIRKGEELTIDYGEAWWANKK--FPCLC 352
Query: 156 GAPDCRY 136
+ +CRY
Sbjct: 353 KSSECRY 359
>Z83230-10|CAL22704.2| 714|Caenorhabditis elegans Hypothetical
protein Y43F4B.3 protein.
Length = 714
Score = 45.2 bits (102), Expect = 1e-05
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Frame = -1
Query: 336 MNHSCEASAAAVRVFTRH--RDXRLPLVVLFATRDIHPGEPLTFDYGDKFWAIKAKWMRC 163
+NHSC+ S+ V V++R D +P V ++A +DI GE +T Y + K ++C
Sbjct: 641 INHSCDPSSVFVEVYSRRFEEDPLIPRVAVYAIKDIALGEEITIAYYEPGIEWKRSSVKC 700
Query: 162 ECGAPDC 142
C + C
Sbjct: 701 RCKSTKC 707
>L07144-10|AAK21437.1| 1327|Caenorhabditis elegans Hypothetical
protein R05D3.11 protein.
Length = 1327
Score = 45.2 bits (102), Expect = 1e-05
Identities = 21/65 (32%), Positives = 30/65 (46%)
Frame = -1
Query: 336 MNHSCEASAAAVRVFTRHRDXRLPLVVLFATRDIHPGEPLTFDYGDKFWAIKAKWMRCEC 157
+NHSC+ + V D RLP V F + + G+ LT+DY + C C
Sbjct: 1256 LNHSCDPNVHVQHVMYDTHDLRLPWVAFFTRKYVKAGDELTWDYQYTQDQTATTQLTCHC 1315
Query: 156 GAPDC 142
GA +C
Sbjct: 1316 GAENC 1320
>AL021481-9|CAA16332.3| 714|Caenorhabditis elegans Hypothetical
protein Y43F4B.3 protein.
Length = 714
Score = 45.2 bits (102), Expect = 1e-05
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Frame = -1
Query: 336 MNHSCEASAAAVRVFTRH--RDXRLPLVVLFATRDIHPGEPLTFDYGDKFWAIKAKWMRC 163
+NHSC+ S+ V V++R D +P V ++A +DI GE +T Y + K ++C
Sbjct: 641 INHSCDPSSVFVEVYSRRFEEDPLIPRVAVYAIKDIALGEEITIAYYEPGIEWKRSSVKC 700
Query: 162 ECGAPDC 142
C + C
Sbjct: 701 RCKSTKC 707
>U37430-5|AAB52674.2| 389|Caenorhabditis elegans Set
(trithorax/polycomb) domaincontaining protein 12
protein.
Length = 389
Score = 44.8 bits (101), Expect = 2e-05
Identities = 26/66 (39%), Positives = 37/66 (56%)
Frame = -1
Query: 336 MNHSCEASAAAVRVFTRHRDXRLPLVVLFATRDIHPGEPLTFDYGDKFWAIKAKWMRCEC 157
+NHSC +A V+V+T D + + +FA++ I PGE +TFDYG F C+C
Sbjct: 173 INHSCNPNAL-VKVWTVP-DRPMKSLGIFASKVIKPGEEITFDYGTSF----RNDQPCQC 226
Query: 156 GAPDCR 139
G CR
Sbjct: 227 GEAACR 232
>Z81048-3|CAB02841.1| 407|Caenorhabditis elegans Hypothetical
protein C41G7.4 protein.
Length = 407
Score = 41.5 bits (93), Expect = 1e-04
Identities = 21/63 (33%), Positives = 31/63 (49%)
Frame = -1
Query: 330 HSCEASAAAVRVFTRHRDXRLPLVVLFATRDIHPGEPLTFDYGDKFWAIKAKWMRCECGA 151
HSC + VRV+ + +V + +I+PG PLT DYG + +CECG+
Sbjct: 297 HSCSPNLEIVRVYQKGLSPAHVHLVFISLLNIYPGTPLTMDYGYNYMKNHLNG-KCECGS 355
Query: 150 PDC 142
C
Sbjct: 356 FAC 358
>AC006729-5|AAK84599.2| 568|Caenorhabditis elegans Hypothetical
protein Y24D9A.2 protein.
Length = 568
Score = 39.9 bits (89), Expect = 5e-04
Identities = 21/66 (31%), Positives = 29/66 (43%)
Frame = -1
Query: 336 MNHSCEASAAAVRVFTRHRDXRLPLVVLFATRDIHPGEPLTFDYGDKFWAIKAKWMRCEC 157
+ H+C + VRVF + +VL D+ P PLT DYG + + RC C
Sbjct: 459 VGHACAPNMEVVRVFQKSLSPAHLHLVLVTLEDVFPSVPLTIDYGKTYTDVLKD--RCRC 516
Query: 156 GAPDCR 139
CR
Sbjct: 517 RTFACR 522
>AF100669-3|AAK39266.1| 747|Caenorhabditis elegans Hypothetical
protein R11E3.4 protein.
Length = 747
Score = 39.1 bits (87), Expect = 8e-04
Identities = 19/43 (44%), Positives = 24/43 (55%)
Frame = -1
Query: 330 HSCEASAAAVRVFTRHRDXRLPLVVLFATRDIHPGEPLTFDYG 202
HSC+ + A VRVF + ++L DI PG LTFDYG
Sbjct: 506 HSCQPNMAMVRVFQKGFSPAHCKLLLVTLEDIFPGVELTFDYG 548
>Z82094-3|CAB05024.1| 2561|Caenorhabditis elegans Hypothetical protein
T12D8.1 protein.
Length = 2561
Score = 38.3 bits (85), Expect = 0.001
Identities = 20/65 (30%), Positives = 33/65 (50%)
Frame = -1
Query: 336 MNHSCEASAAAVRVFTRHRDXRLPLVVLFATRDIHPGEPLTFDYGDKFWAIKAKWMRCEC 157
+NHSC+ + + ++ R +++ A R I E LT+DY + K + C C
Sbjct: 2494 INHSCDPNCST-QILDAGSGAREKKIIITANRPISANEELTYDYQFELEGTTDK-IPCLC 2551
Query: 156 GAPDC 142
GAP+C
Sbjct: 2552 GAPNC 2556
>Z81120-8|CAB03348.1| 2561|Caenorhabditis elegans Hypothetical protein
T12D8.1 protein.
Length = 2561
Score = 38.3 bits (85), Expect = 0.001
Identities = 20/65 (30%), Positives = 33/65 (50%)
Frame = -1
Query: 336 MNHSCEASAAAVRVFTRHRDXRLPLVVLFATRDIHPGEPLTFDYGDKFWAIKAKWMRCEC 157
+NHSC+ + + ++ R +++ A R I E LT+DY + K + C C
Sbjct: 2494 INHSCDPNCST-QILDAGSGAREKKIIITANRPISANEELTYDYQFELEGTTDK-IPCLC 2551
Query: 156 GAPDC 142
GAP+C
Sbjct: 2552 GAPNC 2556
>AC024776-10|AAM97972.1| 159|Caenorhabditis elegans Set
(trithorax/polycomb) domaincontaining protein 23,
isoform b protein.
Length = 159
Score = 37.9 bits (84), Expect = 0.002
Identities = 23/67 (34%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Frame = -1
Query: 336 MNHSCEASAAAVRVFTRHRDXRLPLVVLFATRDIHPGEPLTFDYGDKFWAIKAKWMR-CE 160
+NHSCE + + +P +FA RDI GE L +DYG AI+ + + C
Sbjct: 87 LNHSCEPNC---EIILARLGRMIPAAGIFAKRDIVRGEELCYDYGHS--AIEGENRKLCL 141
Query: 159 CGAPDCR 139
C + CR
Sbjct: 142 CKSEKCR 148
>AC024776-9|AAK68462.1| 244|Caenorhabditis elegans Set
(trithorax/polycomb) domaincontaining protein 23,
isoform a protein.
Length = 244
Score = 37.9 bits (84), Expect = 0.002
Identities = 23/67 (34%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Frame = -1
Query: 336 MNHSCEASAAAVRVFTRHRDXRLPLVVLFATRDIHPGEPLTFDYGDKFWAIKAKWMR-CE 160
+NHSCE + + +P +FA RDI GE L +DYG AI+ + + C
Sbjct: 172 LNHSCEPNC---EIILARLGRMIPAAGIFAKRDIVRGEELCYDYGHS--AIEGENRKLCL 226
Query: 159 CGAPDCR 139
C + CR
Sbjct: 227 CKSEKCR 233
>AC006674-4|AAF39940.1| 402|Caenorhabditis elegans Hypothetical
protein K12H6.11 protein.
Length = 402
Score = 35.1 bits (77), Expect = 0.013
Identities = 18/47 (38%), Positives = 24/47 (51%)
Frame = -1
Query: 333 NHSCEASAAAVRVFTRHRDXRLPLVVLFATRDIHPGEPLTFDYGDKF 193
+H C+A+ RVF +VLFA I PG LTF+YG +
Sbjct: 300 SHGCKANMELGRVFQGGFSPADMKIVLFAKEIIKPGTELTFNYGPSY 346
>U41508-1|AAG00027.3| 944|Caenorhabditis elegans Set
(trithorax/polycomb) domaincontaining protein 19
protein.
Length = 944
Score = 34.7 bits (76), Expect = 0.017
Identities = 22/68 (32%), Positives = 31/68 (45%)
Frame = -1
Query: 336 MNHSCEASAAAVRVFTRHRDXRLPLVVLFATRDIHPGEPLTFDYGDKFWAIKAKWMRCEC 157
++H+C+A+ RVF +VLFA I G LTF YG + K K++ C
Sbjct: 263 LSHACQANLELGRVFQGGFSFADVRIVLFAKETIPAGSELTFHYGPDY---KEKFLEDLC 319
Query: 156 GAPDCRYP 133
C P
Sbjct: 320 LCYTCFVP 327
>AL021448-1|CAA16276.2| 898|Caenorhabditis elegans Hypothetical
protein Y2H9A.1 protein.
Length = 898
Score = 30.3 bits (65), Expect = 0.37
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 5/70 (7%)
Frame = -1
Query: 336 MNHSCEASAAA--VRVFTRH-RDXRL--PLVVLFATRDIHPGEPLTFDYGDKFWAIKAKW 172
+NHSC+ +AA+ +VF + ++ L + A R I G+ +TF Y +
Sbjct: 616 INHSCDPNAASFVTKVFVKKTKEGSLYDTRSYIRAIRTIDDGDEITFSYNMNN---EENL 672
Query: 171 MRCECGAPDC 142
CECGA +C
Sbjct: 673 PDCECGAENC 682
>AF233290-1|AAF62516.1| 898|Caenorhabditis elegans maternal-effect
sterile 4 protein.
Length = 898
Score = 30.3 bits (65), Expect = 0.37
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 5/70 (7%)
Frame = -1
Query: 336 MNHSCEASAAA--VRVFTRH-RDXRL--PLVVLFATRDIHPGEPLTFDYGDKFWAIKAKW 172
+NHSC+ +AA+ +VF + ++ L + A R I G+ +TF Y +
Sbjct: 616 INHSCDPNAASFVTKVFVKKTKEGSLYDTRSYIRAIRTIDDGDEITFSYNMNN---EENL 672
Query: 171 MRCECGAPDC 142
CECGA +C
Sbjct: 673 PDCECGAENC 682
>AF163019-1|AAD49324.1| 1312|Caenorhabditis elegans
trithorax-related protein LIN-59 protein.
Length = 1312
Score = 30.3 bits (65), Expect = 0.37
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = -1
Query: 255 LFATRDIHPGEPLTFDYGDKFWAIKAKWMRCECGAPDCRYPVKG 124
+FA D++P +T D D + M C CGA +C+ ++G
Sbjct: 733 VFALSDLNPNAEITVDKSD----LLPFDMACNCGATECKRVIRG 772
>AF039718-1|AAB96746.1| 1312|Caenorhabditis elegans Abnormal cell
lineage protein 59 protein.
Length = 1312
Score = 30.3 bits (65), Expect = 0.37
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = -1
Query: 255 LFATRDIHPGEPLTFDYGDKFWAIKAKWMRCECGAPDCRYPVKG 124
+FA D++P +T D D + M C CGA +C+ ++G
Sbjct: 733 VFALSDLNPNAEITVDKSD----LLPFDMACNCGATECKRVIRG 772
>U51995-3|AAY86262.1| 174|Caenorhabditis elegans Hypothetical
protein F07G6.9 protein.
Length = 174
Score = 27.9 bits (59), Expect = 2.0
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = -1
Query: 243 RDIHPGEPLTFDYGDKFWAIKAKWMRCECGAPDCR 139
R HPGE L + D++ + KA++ CG + R
Sbjct: 112 RRTHPGENLVIVFSDEYCSQKAEFSSQNCGELELR 146
>U00043-3|AAP82636.1| 105|Caenorhabditis elegans Set
(trithorax/polycomb) domaincontaining protein 1, isoform
b protein.
Length = 105
Score = 27.9 bits (59), Expect = 2.0
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = -1
Query: 261 VVLFATRDIHPGEPLTFDYGDK 196
++L A R I GE L +DYGD+
Sbjct: 70 LILVARRQIAQGEELLYDYGDR 91
>U00043-2|AAC77512.1| 242|Caenorhabditis elegans Set
(trithorax/polycomb) domaincontaining protein 1, isoform
a protein.
Length = 242
Score = 27.9 bits (59), Expect = 2.0
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = -1
Query: 261 VVLFATRDIHPGEPLTFDYGDK 196
++L A R I GE L +DYGD+
Sbjct: 207 LILVARRQIAQGEELLYDYGDR 228
>U41508-3|AAN39664.1| 317|Caenorhabditis elegans Set
(trithorax/polycomb) domaincontaining protein 20,
isoform a protein.
Length = 317
Score = 26.6 bits (56), Expect = 4.5
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = -1
Query: 261 VVLFATRDIHPGEPLTFDYGDKFWAIKAKWMRCECGAPDC 142
V+ +T I P + +TF Y D++ IK C+C + C
Sbjct: 223 VIFTSTMPIFPSQEVTFRYSDEY-IIKQLGDCCKCASLCC 261
>U41508-2|AAN39665.2| 552|Caenorhabditis elegans Set
(trithorax/polycomb) domaincontaining protein 20,
isoform b protein.
Length = 552
Score = 26.6 bits (56), Expect = 4.5
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = -1
Query: 261 VVLFATRDIHPGEPLTFDYGDKFWAIKAKWMRCECGAPDC 142
V+ +T I P + +TF Y D++ IK C+C + C
Sbjct: 458 VIFTSTMPIFPSQEVTFRYSDEY-IIKQLGDCCKCASLCC 496
>AJ871144-1|CAI38753.2| 476|Caenorhabditis elegans
UDP-galactopyranose mutase protein.
Length = 476
Score = 26.2 bits (55), Expect = 6.0
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +1
Query: 217 ERFSWVYVPGREQDDERQTXVAVAGEHADGG 309
E+F+W+Y P RE R T ++ GE G
Sbjct: 320 EKFTWLYFPDREVPFFRVTILSRYGEVTPDG 350
>AF125442-8|AAD12787.2| 476|Caenorhabditis elegans Hypothetical
protein H04M03.4 protein.
Length = 476
Score = 26.2 bits (55), Expect = 6.0
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +1
Query: 217 ERFSWVYVPGREQDDERQTXVAVAGEHADGG 309
E+F+W+Y P RE R T ++ GE G
Sbjct: 320 EKFTWLYFPDREVPFFRVTILSRYGEVTPDG 350
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,965,007
Number of Sequences: 27780
Number of extensions: 100397
Number of successful extensions: 229
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 226
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 227
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 429601520
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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