Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_pT_A24
         (669 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_07_0347 - 29440541-29440664,29440908-29441020,29441522-294416...   184   8e-47
07_03_0445 - 18281715-18281832,18282274-18282505,18283486-182835...   183   1e-46
10_08_0945 - 21738643-21738760,21740056-21740287,21740582-217406...   182   3e-46
12_02_0695 + 22220054-22220056,22221226-22221276,22221415-222215...   178   3e-45
08_02_0625 + 19438768-19438889,19438897-19439065,19439131-194391...    29   3.3  
01_06_0319 - 28441082-28441102,28441630-28441701,28442568-284426...    28   5.9  
01_01_0007 + 28940-28976,29146-29228,29885-29963,30258-30325,305...    28   5.9  

>05_07_0347 -
           29440541-29440664,29440908-29441020,29441522-29441689,
           29442341-29442391,29442518-29442555,29442885-29442978
          Length = 195

 Score =  184 bits (447), Expect = 8e-47
 Identities = 83/130 (63%), Positives = 102/130 (78%)
 Frame = -2

Query: 479 AEQRERTFIMVKPDGVQRGLVGTIIERFEKKGFKLVGLKFVWPSEELLQQHYSDLASRPF 300
           A + ERTFI +KPDGVQRGL+  I+ RFE+KGFKLV +K V PS+E  Q+HY DL  RPF
Sbjct: 42  AAEMERTFIAIKPDGVQRGLISEILSRFERKGFKLVAIKLVVPSKEFAQKHYHDLKDRPF 101

Query: 299 FPGLVKYMSSGPVVPMVWEGLNVVKTGRQMLGATNPADSQPGTIRGDLCIQVGRNIIHGS 120
           F GL  ++SSGPV+ MVWEG  V+K GR+++GAT+P  S+PGTIRGDL + VGRNIIHGS
Sbjct: 102 FNGLCDFLSSGPVLAMVWEGEGVIKYGRKLIGATDPQKSEPGTIRGDLAVVVGRNIIHGS 161

Query: 119 DSVESAKKEI 90
           D  E+AK EI
Sbjct: 162 DGPETAKAEI 171



 Score = 33.9 bits (74), Expect = 0.12
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = -3

Query: 100 KRKSGLWFTDKEVVGWTPANENWVYAV 20
           K + GLWF  +E+V +T   E W+Y V
Sbjct: 168 KAEIGLWFEPRELVSYTSNEEKWIYGV 194


>07_03_0445 -
           18281715-18281832,18282274-18282505,18283486-18283534,
           18283733-18283783
          Length = 149

 Score =  183 bits (446), Expect = 1e-46
 Identities = 81/126 (64%), Positives = 103/126 (81%)
 Frame = -2

Query: 467 ERTFIMVKPDGVQRGLVGTIIERFEKKGFKLVGLKFVWPSEELLQQHYSDLASRPFFPGL 288
           E++FIM+KPDGVQRGL+G II RFEKKGF L G+KF+       QQHY+DL+ +PFFPGL
Sbjct: 2   EQSFIMIKPDGVQRGLIGDIISRFEKKGFYLRGMKFMNVERSFAQQHYADLSDKPFFPGL 61

Query: 287 VKYMSSGPVVPMVWEGLNVVKTGRQMLGATNPADSQPGTIRGDLCIQVGRNIIHGSDSVE 108
           V+Y+ SGPVV MVWEG +VV TGR+++GAT P ++ PGTIR D  ++VGRN+IHGSDSV+
Sbjct: 62  VEYIISGPVVAMVWEGKDVVATGRRIIGATRPWEAAPGTIRADYAVEVGRNVIHGSDSVD 121

Query: 107 SAKKEI 90
           + KKEI
Sbjct: 122 NGKKEI 127


>10_08_0945 -
           21738643-21738760,21740056-21740287,21740582-21740630,
           21740720-21740776
          Length = 151

 Score =  182 bits (442), Expect = 3e-46
 Identities = 79/126 (62%), Positives = 103/126 (81%)
 Frame = -2

Query: 467 ERTFIMVKPDGVQRGLVGTIIERFEKKGFKLVGLKFVWPSEELLQQHYSDLASRPFFPGL 288
           E+TFIM+KPDGVQRGL+G +I RFEKKGF L  +K +   +   ++HY+DL+S+PFF GL
Sbjct: 4   EQTFIMIKPDGVQRGLIGEVIGRFEKKGFYLKAMKLINVEKSFAEKHYADLSSKPFFGGL 63

Query: 287 VKYMSSGPVVPMVWEGLNVVKTGRQMLGATNPADSQPGTIRGDLCIQVGRNIIHGSDSVE 108
           V+Y+ SGPVV MVWEG  VV TGR+++GATNP  ++PGTIRGD  + +GRN+IHGSDSVE
Sbjct: 64  VEYIVSGPVVAMVWEGKQVVSTGRKLVGATNPLAAEPGTIRGDFAVDIGRNVIHGSDSVE 123

Query: 107 SAKKEI 90
           +A+KEI
Sbjct: 124 NARKEI 129


>12_02_0695 +
           22220054-22220056,22221226-22221276,22221415-22221501,
           22222064-22222144,22222241-22222353,22222482-22222531,
           22222790-22222857
          Length = 150

 Score =  178 bits (434), Expect = 3e-45
 Identities = 77/126 (61%), Positives = 101/126 (80%)
 Frame = -2

Query: 467 ERTFIMVKPDGVQRGLVGTIIERFEKKGFKLVGLKFVWPSEELLQQHYSDLASRPFFPGL 288
           E+++IM+KPDGVQRGLVG II RFEKKGF L GLK     ++L Q+HY DL  +PFFPGL
Sbjct: 3   EQSYIMIKPDGVQRGLVGEIISRFEKKGFVLKGLKLFQCPKDLAQEHYKDLKEKPFFPGL 62

Query: 287 VKYMSSGPVVPMVWEGLNVVKTGRQMLGATNPADSQPGTIRGDLCIQVGRNIIHGSDSVE 108
           ++Y++SGPVV M WEG  VV + R+++GATNP  ++PGTIRGDL +Q GRN++HGSDS +
Sbjct: 63  IEYITSGPVVCMAWEGNGVVASARKLIGATNPLQAEPGTIRGDLAVQTGRNVVHGSDSPD 122

Query: 107 SAKKEI 90
           + K+EI
Sbjct: 123 NGKREI 128


>08_02_0625 +
           19438768-19438889,19438897-19439065,19439131-19439174,
           19439431-19440061
          Length = 321

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 18/64 (28%), Positives = 31/64 (48%)
 Frame = +3

Query: 39  SFAGVQPTTSLSVNXRPDFLFSRFNAVRTMDDVTPNLNAEITADSAGLRVSWVSCAKHLT 218
           SF GV    SL +       F+      T D +TP+LN  +T  +A +R+  V+    + 
Sbjct: 35  SFTGVSRVRSLMIGITDIRYFTDSTMYSTEDFLTPSLNCYVT--NAYIRIDKVTAVASID 92

Query: 219 ASLH 230
           +S++
Sbjct: 93  SSIY 96


>01_06_0319 -
           28441082-28441102,28441630-28441701,28442568-28442627,
           28442918-28443105,28444300-28444327,28444880-28444907,
           28444942-28445163,28445238-28445409,28446224-28447468,
           28447573-28447741,28447820-28448045,28449096-28449451,
           28449530-28449724,28450655-28450864,28451729-28452004
          Length = 1155

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
 Frame = +1

Query: 217 RPVFTTLRPSHTIGTTGPELMYFTRPGKKGRDAKSL*CCWRS--SSDGHTNFKPTSLKP 387
           RP       S+T  +  P+    +RPGK+G DA+S+     S  S    T  +P S KP
Sbjct: 529 RPFCPCASRSNTDASLHPQTENGSRPGKRGNDAESVPGTNGSDLSQTDDTEARPCSKKP 587


>01_01_0007 +
           28940-28976,29146-29228,29885-29963,30258-30325,
           30505-30606,31377-31466,31542-31616,31712-31744,
           32277-32330,32400-32471,32543-32617,32975-33124
          Length = 305

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 13/40 (32%), Positives = 22/40 (55%)
 Frame = -2

Query: 161 DLCIQVGRNIIHGSDSVESAKKEIRPXVYGQRSCGLDTCK 42
           D C  VG+ + H S++V +AK+ +   +     C LD C+
Sbjct: 106 DACDVVGKQLEHVSENVNAAKRHLAGRI-DHVDCTLDECQ 144


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,688,460
Number of Sequences: 37544
Number of extensions: 351288
Number of successful extensions: 852
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 836
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 852
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1691314196
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)