Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_pT_A09
         (572 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC127649-1|AAI27650.1|  140|Homo sapiens transmembrane protein 1...    30   5.0  
BC070231-1|AAH70231.1|  139|Homo sapiens TMEM107 protein protein.      30   5.0  
AY358525-1|AAQ88889.1|  140|Homo sapiens GRVS638 protein.              30   5.0  
U13395-1|AAA21465.1|  370|Homo sapiens oxidoreductase protein.         30   6.7  

>BC127649-1|AAI27650.1|  140|Homo sapiens transmembrane protein 107
           protein.
          Length = 140

 Score = 30.3 bits (65), Expect = 5.0
 Identities = 14/33 (42%), Positives = 21/33 (63%)
 Frame = +3

Query: 243 SCILGLWVVEFAFFLSGCTITSFVRKAVAIGFH 341
           S  LGL+ VE A FLSG ++ +  +  ++IG H
Sbjct: 58  SVTLGLFAVELAGFLSGVSMFNSTQSLISIGAH 90


>BC070231-1|AAH70231.1|  139|Homo sapiens TMEM107 protein protein.
          Length = 139

 Score = 30.3 bits (65), Expect = 5.0
 Identities = 14/33 (42%), Positives = 21/33 (63%)
 Frame = +3

Query: 243 SCILGLWVVEFAFFLSGCTITSFVRKAVAIGFH 341
           S  LGL+ VE A FLSG ++ +  +  ++IG H
Sbjct: 64  SVTLGLFAVELAGFLSGVSMFNSTQSLISIGAH 96


>AY358525-1|AAQ88889.1|  140|Homo sapiens GRVS638 protein.
          Length = 140

 Score = 30.3 bits (65), Expect = 5.0
 Identities = 14/33 (42%), Positives = 21/33 (63%)
 Frame = +3

Query: 243 SCILGLWVVEFAFFLSGCTITSFVRKAVAIGFH 341
           S  LGL+ VE A FLSG ++ +  +  ++IG H
Sbjct: 58  SVTLGLFAVELAGFLSGVSMFNSTQSLISIGAH 90


>U13395-1|AAA21465.1|  370|Homo sapiens oxidoreductase protein.
          Length = 370

 Score = 29.9 bits (64), Expect = 6.7
 Identities = 14/37 (37%), Positives = 17/37 (45%)
 Frame = +2

Query: 251 SRTVGCRVCLLLVWMYHH*FRTQSCSHRVPRCCQNVG 361
           S+ VG    + L   +H    T SC HRV  CC   G
Sbjct: 177 SQLVGVHTAVYLGEAFHQVHATGSCHHRVLCCCPRTG 213


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,545,982
Number of Sequences: 237096
Number of extensions: 1795393
Number of successful extensions: 4772
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4640
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4772
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5872755824
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)