Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P05_pT_A07
(422 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U90223-1|AAB94642.1| 252|Homo sapiens deoxyuridine triphosphate... 198 8e-51
U62891-1|AAC51123.1| 164|Homo sapiens deoxyuridine triphosphata... 198 8e-51
U31930-1|AAC50418.1| 164|Homo sapiens deoxyuridine nucleotidohy... 198 8e-51
M89913-1|AAA58444.1| 141|Homo sapiens dUTP pyrophosphatase prot... 198 8e-51
L11877-1|AAA36801.1| 141|Homo sapiens dUTP nucleotidohydrolase ... 198 8e-51
CR541781-1|CAG46580.1| 164|Homo sapiens DUT protein. 198 8e-51
CR541720-1|CAG46521.1| 164|Homo sapiens DUT protein. 198 8e-51
BC110377-1|AAI10378.1| 252|Homo sapiens dUTP pyrophosphatase pr... 198 8e-51
BC070339-1|AAH70339.1| 252|Homo sapiens dUTP pyrophosphatase pr... 198 8e-51
BC033645-1|AAH33645.1| 164|Homo sapiens dUTP pyrophosphatase pr... 198 8e-51
AY935242-1|AAX14045.1| 164|Homo sapiens dUTP pyrophosphatase pr... 198 8e-51
AF018432-2|AAB71394.1| 164|Homo sapiens dUTPase protein. 198 8e-51
AF018432-1|AAB71393.1| 252|Homo sapiens dUTPase protein. 198 8e-51
AB049113-1|BAB13724.1| 164|Homo sapiens dUTP pyrophosphatase pr... 198 8e-51
AF090907-1|AAF24030.1| 73|Homo sapiens PRO0245 protein. 68 2e-11
DQ058014-1|AAY87452.1| 273|Homo sapiens protease protein. 48 1e-05
AF164615-1|AAD51799.1| 1117|Homo sapiens Gag-Pro-Pol protein pro... 48 2e-05
AF164611-1|AAD51793.1| 2294|Homo sapiens Gag-Pro-Pol-Env protein... 47 2e-05
AK074181-1|BAB85007.1| 225|Homo sapiens FLJ00254 protein protein. 46 5e-05
AF164609-1|AAD51791.1| 1177|Homo sapiens Gag-Pro-Pol protein pro... 45 1e-04
AF164613-1|AAD51796.1| 1755|Homo sapiens Gag-Pro-Pol protein pro... 44 2e-04
AF074086-6|AAD21096.1| 333|Homo sapiens protease protein. 44 2e-04
AF074086-2|AAF88166.1| 333|Homo sapiens protease protein. 44 2e-04
AF164614-1|AAD51797.1| 1879|Homo sapiens Gag-Pro-Pol protein pro... 43 5e-04
AK131011-1|BAC85476.1| 134|Homo sapiens protein ( Homo sapiens ... 40 0.003
AY247105-1|AAO72160.1| 1543|Homo sapiens ATP-binding cassette su... 29 6.5
AY247065-1|AAO72161.1| 1543|Homo sapiens ATP-binding cassette su... 29 6.5
AY028900-1|AAK30025.1| 1543|Homo sapiens ATP-binding cassette A1... 29 6.5
>U90223-1|AAB94642.1| 252|Homo sapiens deoxyuridine triphosphate
nucleotidohydrolase precursor protein.
Length = 252
Score = 198 bits (482), Expect = 8e-51
Identities = 93/128 (72%), Positives = 103/128 (80%)
Frame = -2
Query: 418 AFQPVRGSEKAAGIDLMSAYDYTVPARGKELVKTDLQIELPPGCYGRVAPRSGLALKNFI 239
A P RGS +AAG DL SAYDYT+P K +VKTD+QI LP GCYGRVAPRSGLA K+FI
Sbjct: 123 ATAPTRGSARAAGYDLYSAYDYTIPPMEKAVVKTDIQIALPSGCYGRVAPRSGLAAKHFI 182
Query: 238 DVGAGVIDEDYRGNVGVVLFNHSDTDFSVKKGDRIAQLICEKIYYPVLQEVANLSVTQRG 59
DVGAGVIDEDYRGNVGVVLFN F VKKGDRIAQLICE+I+YP ++EV L T+RG
Sbjct: 183 DVGAGVIDEDYRGNVGVVLFNFGKEKFEVKKGDRIAQLICERIFYPEIEEVQALDDTERG 242
Query: 58 DGGFGSTG 35
GGFGSTG
Sbjct: 243 SGGFGSTG 250
>U62891-1|AAC51123.1| 164|Homo sapiens deoxyuridine triphosphatase
protein.
Length = 164
Score = 198 bits (482), Expect = 8e-51
Identities = 93/128 (72%), Positives = 103/128 (80%)
Frame = -2
Query: 418 AFQPVRGSEKAAGIDLMSAYDYTVPARGKELVKTDLQIELPPGCYGRVAPRSGLALKNFI 239
A P RGS +AAG DL SAYDYT+P K +VKTD+QI LP GCYGRVAPRSGLA K+FI
Sbjct: 35 ATAPTRGSARAAGYDLYSAYDYTIPPMEKAVVKTDIQIALPSGCYGRVAPRSGLAAKHFI 94
Query: 238 DVGAGVIDEDYRGNVGVVLFNHSDTDFSVKKGDRIAQLICEKIYYPVLQEVANLSVTQRG 59
DVGAGVIDEDYRGNVGVVLFN F VKKGDRIAQLICE+I+YP ++EV L T+RG
Sbjct: 95 DVGAGVIDEDYRGNVGVVLFNFGKEKFEVKKGDRIAQLICERIFYPEIEEVQALDDTERG 154
Query: 58 DGGFGSTG 35
GGFGSTG
Sbjct: 155 SGGFGSTG 162
>U31930-1|AAC50418.1| 164|Homo sapiens deoxyuridine
nucleotidohydrolase protein.
Length = 164
Score = 198 bits (482), Expect = 8e-51
Identities = 93/128 (72%), Positives = 103/128 (80%)
Frame = -2
Query: 418 AFQPVRGSEKAAGIDLMSAYDYTVPARGKELVKTDLQIELPPGCYGRVAPRSGLALKNFI 239
A P RGS +AAG DL SAYDYT+P K +VKTD+QI LP GCYGRVAPRSGLA K+FI
Sbjct: 35 ATAPTRGSARAAGYDLYSAYDYTIPPMEKAVVKTDIQIALPSGCYGRVAPRSGLAAKHFI 94
Query: 238 DVGAGVIDEDYRGNVGVVLFNHSDTDFSVKKGDRIAQLICEKIYYPVLQEVANLSVTQRG 59
DVGAGVIDEDYRGNVGVVLFN F VKKGDRIAQLICE+I+YP ++EV L T+RG
Sbjct: 95 DVGAGVIDEDYRGNVGVVLFNFGKEKFEVKKGDRIAQLICERIFYPEIEEVQALDDTERG 154
Query: 58 DGGFGSTG 35
GGFGSTG
Sbjct: 155 SGGFGSTG 162
>M89913-1|AAA58444.1| 141|Homo sapiens dUTP pyrophosphatase
protein.
Length = 141
Score = 198 bits (482), Expect = 8e-51
Identities = 93/128 (72%), Positives = 103/128 (80%)
Frame = -2
Query: 418 AFQPVRGSEKAAGIDLMSAYDYTVPARGKELVKTDLQIELPPGCYGRVAPRSGLALKNFI 239
A P RGS +AAG DL SAYDYT+P K +VKTD+QI LP GCYGRVAPRSGLA K+FI
Sbjct: 12 ATAPTRGSARAAGYDLYSAYDYTIPPMEKAVVKTDIQIALPSGCYGRVAPRSGLAAKHFI 71
Query: 238 DVGAGVIDEDYRGNVGVVLFNHSDTDFSVKKGDRIAQLICEKIYYPVLQEVANLSVTQRG 59
DVGAGVIDEDYRGNVGVVLFN F VKKGDRIAQLICE+I+YP ++EV L T+RG
Sbjct: 72 DVGAGVIDEDYRGNVGVVLFNFGKEKFEVKKGDRIAQLICERIFYPEIEEVQALDDTERG 131
Query: 58 DGGFGSTG 35
GGFGSTG
Sbjct: 132 SGGFGSTG 139
>L11877-1|AAA36801.1| 141|Homo sapiens dUTP nucleotidohydrolase
protein.
Length = 141
Score = 198 bits (482), Expect = 8e-51
Identities = 93/128 (72%), Positives = 103/128 (80%)
Frame = -2
Query: 418 AFQPVRGSEKAAGIDLMSAYDYTVPARGKELVKTDLQIELPPGCYGRVAPRSGLALKNFI 239
A P RGS +AAG DL SAYDYT+P K +VKTD+QI LP GCYGRVAPRSGLA K+FI
Sbjct: 12 ATAPTRGSARAAGYDLYSAYDYTIPPMEKAVVKTDIQIALPSGCYGRVAPRSGLAAKHFI 71
Query: 238 DVGAGVIDEDYRGNVGVVLFNHSDTDFSVKKGDRIAQLICEKIYYPVLQEVANLSVTQRG 59
DVGAGVIDEDYRGNVGVVLFN F VKKGDRIAQLICE+I+YP ++EV L T+RG
Sbjct: 72 DVGAGVIDEDYRGNVGVVLFNFGKEKFEVKKGDRIAQLICERIFYPEIEEVQALDDTERG 131
Query: 58 DGGFGSTG 35
GGFGSTG
Sbjct: 132 SGGFGSTG 139
>CR541781-1|CAG46580.1| 164|Homo sapiens DUT protein.
Length = 164
Score = 198 bits (482), Expect = 8e-51
Identities = 93/128 (72%), Positives = 103/128 (80%)
Frame = -2
Query: 418 AFQPVRGSEKAAGIDLMSAYDYTVPARGKELVKTDLQIELPPGCYGRVAPRSGLALKNFI 239
A P RGS +AAG DL SAYDYT+P K +VKTD+QI LP GCYGRVAPRSGLA K+FI
Sbjct: 35 ATAPTRGSARAAGYDLYSAYDYTIPPMEKAVVKTDIQIALPSGCYGRVAPRSGLAAKHFI 94
Query: 238 DVGAGVIDEDYRGNVGVVLFNHSDTDFSVKKGDRIAQLICEKIYYPVLQEVANLSVTQRG 59
DVGAGVIDEDYRGNVGVVLFN F VKKGDRIAQLICE+I+YP ++EV L T+RG
Sbjct: 95 DVGAGVIDEDYRGNVGVVLFNFGKEKFEVKKGDRIAQLICERIFYPEIEEVQALDDTERG 154
Query: 58 DGGFGSTG 35
GGFGSTG
Sbjct: 155 SGGFGSTG 162
>CR541720-1|CAG46521.1| 164|Homo sapiens DUT protein.
Length = 164
Score = 198 bits (482), Expect = 8e-51
Identities = 93/128 (72%), Positives = 103/128 (80%)
Frame = -2
Query: 418 AFQPVRGSEKAAGIDLMSAYDYTVPARGKELVKTDLQIELPPGCYGRVAPRSGLALKNFI 239
A P RGS +AAG DL SAYDYT+P K +VKTD+QI LP GCYGRVAPRSGLA K+FI
Sbjct: 35 ATAPTRGSARAAGYDLYSAYDYTIPPMEKAVVKTDIQIALPSGCYGRVAPRSGLAAKHFI 94
Query: 238 DVGAGVIDEDYRGNVGVVLFNHSDTDFSVKKGDRIAQLICEKIYYPVLQEVANLSVTQRG 59
DVGAGVIDEDYRGNVGVVLFN F VKKGDRIAQLICE+I+YP ++EV L T+RG
Sbjct: 95 DVGAGVIDEDYRGNVGVVLFNFGKEKFEVKKGDRIAQLICERIFYPEIEEVQALDDTERG 154
Query: 58 DGGFGSTG 35
GGFGSTG
Sbjct: 155 SGGFGSTG 162
>BC110377-1|AAI10378.1| 252|Homo sapiens dUTP pyrophosphatase
protein.
Length = 252
Score = 198 bits (482), Expect = 8e-51
Identities = 93/128 (72%), Positives = 103/128 (80%)
Frame = -2
Query: 418 AFQPVRGSEKAAGIDLMSAYDYTVPARGKELVKTDLQIELPPGCYGRVAPRSGLALKNFI 239
A P RGS +AAG DL SAYDYT+P K +VKTD+QI LP GCYGRVAPRSGLA K+FI
Sbjct: 123 ATAPTRGSARAAGYDLYSAYDYTIPPMEKAVVKTDIQIALPSGCYGRVAPRSGLAAKHFI 182
Query: 238 DVGAGVIDEDYRGNVGVVLFNHSDTDFSVKKGDRIAQLICEKIYYPVLQEVANLSVTQRG 59
DVGAGVIDEDYRGNVGVVLFN F VKKGDRIAQLICE+I+YP ++EV L T+RG
Sbjct: 183 DVGAGVIDEDYRGNVGVVLFNFGKEKFEVKKGDRIAQLICERIFYPEIEEVQALDDTERG 242
Query: 58 DGGFGSTG 35
GGFGSTG
Sbjct: 243 SGGFGSTG 250
>BC070339-1|AAH70339.1| 252|Homo sapiens dUTP pyrophosphatase
protein.
Length = 252
Score = 198 bits (482), Expect = 8e-51
Identities = 93/128 (72%), Positives = 103/128 (80%)
Frame = -2
Query: 418 AFQPVRGSEKAAGIDLMSAYDYTVPARGKELVKTDLQIELPPGCYGRVAPRSGLALKNFI 239
A P RGS +AAG DL SAYDYT+P K +VKTD+QI LP GCYGRVAPRSGLA K+FI
Sbjct: 123 ATAPTRGSARAAGYDLYSAYDYTIPPMEKAVVKTDIQIALPSGCYGRVAPRSGLAAKHFI 182
Query: 238 DVGAGVIDEDYRGNVGVVLFNHSDTDFSVKKGDRIAQLICEKIYYPVLQEVANLSVTQRG 59
DVGAGVIDEDYRGNVGVVLFN F VKKGDRIAQLICE+I+YP ++EV L T+RG
Sbjct: 183 DVGAGVIDEDYRGNVGVVLFNFGKEKFEVKKGDRIAQLICERIFYPEIEEVQALDDTERG 242
Query: 58 DGGFGSTG 35
GGFGSTG
Sbjct: 243 SGGFGSTG 250
>BC033645-1|AAH33645.1| 164|Homo sapiens dUTP pyrophosphatase
protein.
Length = 164
Score = 198 bits (482), Expect = 8e-51
Identities = 93/128 (72%), Positives = 103/128 (80%)
Frame = -2
Query: 418 AFQPVRGSEKAAGIDLMSAYDYTVPARGKELVKTDLQIELPPGCYGRVAPRSGLALKNFI 239
A P RGS +AAG DL SAYDYT+P K +VKTD+QI LP GCYGRVAPRSGLA K+FI
Sbjct: 35 ATAPTRGSARAAGYDLYSAYDYTIPPMEKAVVKTDIQIALPSGCYGRVAPRSGLAAKHFI 94
Query: 238 DVGAGVIDEDYRGNVGVVLFNHSDTDFSVKKGDRIAQLICEKIYYPVLQEVANLSVTQRG 59
DVGAGVIDEDYRGNVGVVLFN F VKKGDRIAQLICE+I+YP ++EV L T+RG
Sbjct: 95 DVGAGVIDEDYRGNVGVVLFNFGKEKFEVKKGDRIAQLICERIFYPEIEEVQALDDTERG 154
Query: 58 DGGFGSTG 35
GGFGSTG
Sbjct: 155 SGGFGSTG 162
>AY935242-1|AAX14045.1| 164|Homo sapiens dUTP pyrophosphatase
protein.
Length = 164
Score = 198 bits (482), Expect = 8e-51
Identities = 93/128 (72%), Positives = 103/128 (80%)
Frame = -2
Query: 418 AFQPVRGSEKAAGIDLMSAYDYTVPARGKELVKTDLQIELPPGCYGRVAPRSGLALKNFI 239
A P RGS +AAG DL SAYDYT+P K +VKTD+QI LP GCYGRVAPRSGLA K+FI
Sbjct: 35 ATAPTRGSARAAGYDLYSAYDYTIPPMEKAVVKTDIQIALPSGCYGRVAPRSGLAAKHFI 94
Query: 238 DVGAGVIDEDYRGNVGVVLFNHSDTDFSVKKGDRIAQLICEKIYYPVLQEVANLSVTQRG 59
DVGAGVIDEDYRGNVGVVLFN F VKKGDRIAQLICE+I+YP ++EV L T+RG
Sbjct: 95 DVGAGVIDEDYRGNVGVVLFNFGKEKFEVKKGDRIAQLICERIFYPEIEEVQALDDTERG 154
Query: 58 DGGFGSTG 35
GGFGSTG
Sbjct: 155 SGGFGSTG 162
>AF018432-2|AAB71394.1| 164|Homo sapiens dUTPase protein.
Length = 164
Score = 198 bits (482), Expect = 8e-51
Identities = 93/128 (72%), Positives = 103/128 (80%)
Frame = -2
Query: 418 AFQPVRGSEKAAGIDLMSAYDYTVPARGKELVKTDLQIELPPGCYGRVAPRSGLALKNFI 239
A P RGS +AAG DL SAYDYT+P K +VKTD+QI LP GCYGRVAPRSGLA K+FI
Sbjct: 35 ATAPTRGSARAAGYDLYSAYDYTIPPMEKAVVKTDIQIALPSGCYGRVAPRSGLAAKHFI 94
Query: 238 DVGAGVIDEDYRGNVGVVLFNHSDTDFSVKKGDRIAQLICEKIYYPVLQEVANLSVTQRG 59
DVGAGVIDEDYRGNVGVVLFN F VKKGDRIAQLICE+I+YP ++EV L T+RG
Sbjct: 95 DVGAGVIDEDYRGNVGVVLFNFGKEKFEVKKGDRIAQLICERIFYPEIEEVQALDDTERG 154
Query: 58 DGGFGSTG 35
GGFGSTG
Sbjct: 155 SGGFGSTG 162
>AF018432-1|AAB71393.1| 252|Homo sapiens dUTPase protein.
Length = 252
Score = 198 bits (482), Expect = 8e-51
Identities = 93/128 (72%), Positives = 103/128 (80%)
Frame = -2
Query: 418 AFQPVRGSEKAAGIDLMSAYDYTVPARGKELVKTDLQIELPPGCYGRVAPRSGLALKNFI 239
A P RGS +AAG DL SAYDYT+P K +VKTD+QI LP GCYGRVAPRSGLA K+FI
Sbjct: 123 ATAPTRGSARAAGYDLYSAYDYTIPPMEKAVVKTDIQIALPSGCYGRVAPRSGLAAKHFI 182
Query: 238 DVGAGVIDEDYRGNVGVVLFNHSDTDFSVKKGDRIAQLICEKIYYPVLQEVANLSVTQRG 59
DVGAGVIDEDYRGNVGVVLFN F VKKGDRIAQLICE+I+YP ++EV L T+RG
Sbjct: 183 DVGAGVIDEDYRGNVGVVLFNFGKEKFEVKKGDRIAQLICERIFYPEIEEVQALDDTERG 242
Query: 58 DGGFGSTG 35
GGFGSTG
Sbjct: 243 SGGFGSTG 250
>AB049113-1|BAB13724.1| 164|Homo sapiens dUTP pyrophosphatase
protein.
Length = 164
Score = 198 bits (482), Expect = 8e-51
Identities = 93/128 (72%), Positives = 103/128 (80%)
Frame = -2
Query: 418 AFQPVRGSEKAAGIDLMSAYDYTVPARGKELVKTDLQIELPPGCYGRVAPRSGLALKNFI 239
A P RGS +AAG DL SAYDYT+P K +VKTD+QI LP GCYGRVAPRSGLA K+FI
Sbjct: 35 ATAPTRGSARAAGYDLYSAYDYTIPPMEKAVVKTDIQIALPSGCYGRVAPRSGLAAKHFI 94
Query: 238 DVGAGVIDEDYRGNVGVVLFNHSDTDFSVKKGDRIAQLICEKIYYPVLQEVANLSVTQRG 59
DVGAGVIDEDYRGNVGVVLFN F VKKGDRIAQLICE+I+YP ++EV L T+RG
Sbjct: 95 DVGAGVIDEDYRGNVGVVLFNFGKEKFEVKKGDRIAQLICERIFYPEIEEVQALDDTERG 154
Query: 58 DGGFGSTG 35
GGFGSTG
Sbjct: 155 SGGFGSTG 162
>AF090907-1|AAF24030.1| 73|Homo sapiens PRO0245 protein.
Length = 73
Score = 67.7 bits (158), Expect = 2e-11
Identities = 33/56 (58%), Positives = 38/56 (67%)
Frame = -2
Query: 403 RGSEKAAGIDLMSAYDYTVPARGKELVKTDLQIELPPGCYGRVAPRSGLALKNFID 236
+GS +A G DL AYD T+P K L K D+QI LP GCY RVAP GLA K+FID
Sbjct: 17 QGSTQATGYDLNGAYDDTIPPMEKALGKMDIQIALPSGCYRRVAPWFGLAAKHFID 72
>DQ058014-1|AAY87452.1| 273|Homo sapiens protease protein.
Length = 273
Score = 48.0 bits (109), Expect = 1e-05
Identities = 35/118 (29%), Positives = 58/118 (49%), Gaps = 1/118 (0%)
Frame = -2
Query: 388 AAGIDLMSAYDYTV-PARGKELVKTDLQIELPPGCYGRVAPRSGLALKNFIDVGAGVIDE 212
+A +DL + ++ P + + T + LP G + RS L LK + + GV+D
Sbjct: 3 SAAVDLCTIQAVSLLPGEPPQKIPTGVYGPLPERTVGLILGRSSLNLKG-VQIHTGVVDS 61
Query: 211 DYRGNVGVVLFNHSDTDFSVKKGDRIAQLICEKIYYPVLQEVANLSVTQRGDGGFGST 38
DY+G + +V+ S +S GDRIA+L+ +L + + + GGFGST
Sbjct: 62 DYKGEIQLVI--SSSIPWSASPGDRIAELL-------LLPYIKGGNSEIKRTGGFGST 110
>AF164615-1|AAD51799.1| 1117|Homo sapiens Gag-Pro-Pol protein
protein.
Length = 1117
Score = 47.6 bits (108), Expect = 2e-05
Identities = 26/76 (34%), Positives = 40/76 (52%)
Frame = -2
Query: 349 VPARGKELVKTDLQIELPPGCYGRVAPRSGLALKNFIDVGAGVIDEDYRGNVGVVLFNHS 170
+P + + T + LP G G + RS L LK + + V+D DY+G + +V+ S
Sbjct: 678 LPGEPPQKIPTGVYGPLPEGTVGLILGRSSLNLKG-VQIHTSVVDSDYKGEIQLVI--SS 734
Query: 169 DTDFSVKKGDRIAQLI 122
+S GDRIAQL+
Sbjct: 735 SVPWSASPGDRIAQLL 750
>AF164611-1|AAD51793.1| 2294|Homo sapiens Gag-Pro-Pol-Env protein
protein.
Length = 2294
Score = 47.2 bits (107), Expect = 2e-05
Identities = 26/76 (34%), Positives = 40/76 (52%)
Frame = -2
Query: 349 VPARGKELVKTDLQIELPPGCYGRVAPRSGLALKNFIDVGAGVIDEDYRGNVGVVLFNHS 170
+P + + T + LP G G + RS L LK + + V+D DY+G + +V+ S
Sbjct: 678 LPGEPPQKIPTGVYGPLPKGTVGLILGRSSLNLKG-VQIHTSVVDSDYKGEIQLVI--SS 734
Query: 169 DTDFSVKKGDRIAQLI 122
+S GDRIAQL+
Sbjct: 735 SIPWSASPGDRIAQLL 750
>AK074181-1|BAB85007.1| 225|Homo sapiens FLJ00254 protein protein.
Length = 225
Score = 46.0 bits (104), Expect = 5e-05
Identities = 26/94 (27%), Positives = 51/94 (54%)
Frame = -2
Query: 409 PVRGSEKAAGIDLMSAYDYTVPARGKELVKTDLQIELPPGCYGRVAPRSGLALKNFIDVG 230
P+ + ++AG++++ +P G + + ++ LP G +G + P S A K + V
Sbjct: 76 PLPATLRSAGLEVLVPEGGMLPP-GDTTISLNWKLRLPTGHFGLLLPLSQQAKKG-VAVL 133
Query: 229 AGVIDEDYRGNVGVVLFNHSDTDFSVKKGDRIAQ 128
AGVID DY+ + ++L N S +++ GD + +
Sbjct: 134 AGVIDLDYQDEISLLLHNRSKKEYAWNTGDPLGR 167
>AF164609-1|AAD51791.1| 1177|Homo sapiens Gag-Pro-Pol protein
protein.
Length = 1177
Score = 44.8 bits (101), Expect = 1e-04
Identities = 25/76 (32%), Positives = 39/76 (51%)
Frame = -2
Query: 349 VPARGKELVKTDLQIELPPGCYGRVAPRSGLALKNFIDVGAGVIDEDYRGNVGVVLFNHS 170
+P + + T + LP G G + RS L LK + + V+D DY+G + +V+ S
Sbjct: 678 LPGEPPQKIPTGVYGPLPEGTVGLILGRSSLNLKG-VQIHTSVVDSDYKGEIQLVI--SS 734
Query: 169 DTDFSVKKGDRIAQLI 122
+S GDR AQL+
Sbjct: 735 SIPWSASPGDRSAQLL 750
>AF164613-1|AAD51796.1| 1755|Homo sapiens Gag-Pro-Pol protein
protein.
Length = 1755
Score = 44.0 bits (99), Expect = 2e-04
Identities = 25/76 (32%), Positives = 39/76 (51%)
Frame = -2
Query: 349 VPARGKELVKTDLQIELPPGCYGRVAPRSGLALKNFIDVGAGVIDEDYRGNVGVVLFNHS 170
+P + + T + LP G G + RS L LK + + V+D DY+G + +V+ S
Sbjct: 678 LPGEPPQKIPTGVYGPLPEGTVGLILGRSSLNLKG-VQIHTSVVDSDYKGEIQLVI--SS 734
Query: 169 DTDFSVKKGDRIAQLI 122
+S DRIAQL+
Sbjct: 735 SIPWSASPRDRIAQLL 750
>AF074086-6|AAD21096.1| 333|Homo sapiens protease protein.
Length = 333
Score = 44.0 bits (99), Expect = 2e-04
Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 1/90 (1%)
Frame = -2
Query: 388 AAGIDLMSAYDYTV-PARGKELVKTDLQIELPPGCYGRVAPRSGLALKNFIDVGAGVIDE 212
+A +DL + ++ P + T + LP G G + RS L LK + + V+D
Sbjct: 62 SAAVDLCTIQAVSLLPGEPPQKTPTGVYGPLPKGTVGLILGRSSLNLKG-VQIHTSVVDS 120
Query: 211 DYRGNVGVVLFNHSDTDFSVKKGDRIAQLI 122
DY+G + +V+ S +S DRIAQL+
Sbjct: 121 DYKGEIQLVI--SSSIPWSASPRDRIAQLL 148
>AF074086-2|AAF88166.1| 333|Homo sapiens protease protein.
Length = 333
Score = 44.0 bits (99), Expect = 2e-04
Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 1/90 (1%)
Frame = -2
Query: 388 AAGIDLMSAYDYTV-PARGKELVKTDLQIELPPGCYGRVAPRSGLALKNFIDVGAGVIDE 212
+A +DL + ++ P + T + LP G G + RS L LK + + V+D
Sbjct: 62 SAAVDLCTIQAVSLLPGEPPQKTPTGVYGPLPKGTVGLILGRSSLNLKG-VQIHTSVVDS 120
Query: 211 DYRGNVGVVLFNHSDTDFSVKKGDRIAQLI 122
DY+G + +V+ S +S DRIAQL+
Sbjct: 121 DYKGEIQLVI--SSSIPWSASPRDRIAQLL 148
>AF164614-1|AAD51797.1| 1879|Homo sapiens Gag-Pro-Pol protein
protein.
Length = 1879
Score = 42.7 bits (96), Expect = 5e-04
Identities = 25/76 (32%), Positives = 38/76 (50%)
Frame = -2
Query: 349 VPARGKELVKTDLQIELPPGCYGRVAPRSGLALKNFIDVGAGVIDEDYRGNVGVVLFNHS 170
+P + T + LP G G + RS L LK + + V+D DY+G + +V+ S
Sbjct: 678 LPGEPPQKTPTGVYGPLPKGTVGLILGRSSLNLKG-VQIHTSVVDSDYKGEIQLVI--SS 734
Query: 169 DTDFSVKKGDRIAQLI 122
+S DRIAQL+
Sbjct: 735 SIPWSASPRDRIAQLL 750
>AK131011-1|BAC85476.1| 134|Homo sapiens protein ( Homo sapiens
cDNA FLJ27501 fis, clone TST06374. ).
Length = 134
Score = 40.3 bits (90), Expect = 0.003
Identities = 31/117 (26%), Positives = 54/117 (46%)
Frame = -2
Query: 409 PVRGSEKAAGIDLMSAYDYTVPARGKELVKTDLQIELPPGCYGRVAPRSGLALKNFIDVG 230
PV + +AG++++ +P + +L++ LPPG +G + P S A K + V
Sbjct: 14 PVPATLLSAGLEVLVPDGGRLPPGDTTTIPLNLKLRLPPGYFGLLLPLSQQAKKG-VTVL 72
Query: 229 AGVIDEDYRGNVGVVLFNHSDTDFSVKKGDRIAQLICEKIYYPVLQEVANLSVTQRG 59
AG+I DY + + L N D++ G + L + PV++ L T G
Sbjct: 73 AGMI--DYHDEISLPLHNGGKEDYAWNTGYPLGHL--SVLPCPVIKGNGKLQQTNPG 125
>AY247105-1|AAO72160.1| 1543|Homo sapiens ATP-binding cassette
sub-family A member 10 protein.
Length = 1543
Score = 29.1 bits (62), Expect = 6.5
Identities = 9/20 (45%), Positives = 18/20 (90%)
Frame = +2
Query: 197 ITSIVLINNTGTNINEILQS 256
+TS++++NNTG+NI +++ S
Sbjct: 823 LTSLLIVNNTGSNIEDLVHS 842
>AY247065-1|AAO72161.1| 1543|Homo sapiens ATP-binding cassette
sub-family A member 10 protein.
Length = 1543
Score = 29.1 bits (62), Expect = 6.5
Identities = 9/20 (45%), Positives = 18/20 (90%)
Frame = +2
Query: 197 ITSIVLINNTGTNINEILQS 256
+TS++++NNTG+NI +++ S
Sbjct: 823 LTSLLIVNNTGSNIEDLVHS 842
>AY028900-1|AAK30025.1| 1543|Homo sapiens ATP-binding cassette A10
protein.
Length = 1543
Score = 29.1 bits (62), Expect = 6.5
Identities = 9/20 (45%), Positives = 18/20 (90%)
Frame = +2
Query: 197 ITSIVLINNTGTNINEILQS 256
+TS++++NNTG+NI +++ S
Sbjct: 823 LTSLLIVNNTGSNIEDLVHS 842
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 55,733,061
Number of Sequences: 237096
Number of extensions: 1023562
Number of successful extensions: 1620
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1590
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1618
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3259265358
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -