Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P05_pT_A07
(422 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81097-1|CAB03175.1| 491|Caenorhabditis elegans Hypothetical pr... 169 9e-43
U96695-1|AAB57697.1| 491|Caenorhabditis elegans deoxyuridinetri... 169 9e-43
U00048-5|AAB53832.2| 621|Caenorhabditis elegans Hypothetical pr... 29 1.0
U00048-4|AAM15547.1| 751|Caenorhabditis elegans Hypothetical pr... 29 1.0
Z71181-10|CAA94901.2| 678|Caenorhabditis elegans Hypothetical p... 28 3.2
Z71177-11|CAA94873.2| 678|Caenorhabditis elegans Hypothetical p... 28 3.2
U41556-3|AAM51519.1| 378|Caenorhabditis elegans Cysteine protea... 27 4.2
U41556-2|ABS19475.1| 369|Caenorhabditis elegans Cysteine protea... 27 4.2
U41556-1|AAK39189.1| 379|Caenorhabditis elegans Cysteine protea... 27 4.2
L39939-1|AAA98789.1| 379|Caenorhabditis elegans cathepsin B-lik... 27 4.2
L39894-1|AAA98787.1| 379|Caenorhabditis elegans cathepsin B-lik... 27 4.2
AL021481-2|CAA16334.1| 595|Caenorhabditis elegans Hypothetical ... 26 9.7
>Z81097-1|CAB03175.1| 491|Caenorhabditis elegans Hypothetical
protein K07A1.2 protein.
Length = 491
Score = 169 bits (410), Expect = 9e-43
Identities = 85/125 (68%), Positives = 94/125 (75%)
Frame = -2
Query: 409 PVRGSEKAAGIDLMSAYDYTVPARGKELVKTDLQIELPPGCYGRVAPRSGLALKNFIDVG 230
P GSE+AAG DL SA D TVPA GK V T +Q+ELP G YGRVAPRSGLA K+FIDVG
Sbjct: 199 PTYGSEEAAGADLYSAEDITVPAHGKCCVSTGIQMELPFGYYGRVAPRSGLAAKHFIDVG 258
Query: 229 AGVIDEDYRGNVGVVLFNHSDTDFSVKKGDRIAQLICEKIYYPVLQEVANLSVTQRGDGG 50
AGVID DYRG V V+LFN +D F VKKGDRIAQLICEKI + V + + L T RG GG
Sbjct: 259 AGVIDSDYRGEVKVLLFNFTDNAFEVKKGDRIAQLICEKIGHCVYEAASELENTDRGAGG 318
Query: 49 FGSTG 35
FGSTG
Sbjct: 319 FGSTG 323
Score = 169 bits (410), Expect = 9e-43
Identities = 84/128 (65%), Positives = 95/128 (74%)
Frame = -2
Query: 418 AFQPVRGSEKAAGIDLMSAYDYTVPARGKELVKTDLQIELPPGCYGRVAPRSGLALKNFI 239
A P GS +AAG DL SA D TVPARGK V T +Q+ LP G YGRVAPRSGLA K+FI
Sbjct: 359 AQMPTYGSAEAAGADLYSAEDVTVPARGKLCVSTGIQMALPIGYYGRVAPRSGLAAKHFI 418
Query: 238 DVGAGVIDEDYRGNVGVVLFNHSDTDFSVKKGDRIAQLICEKIYYPVLQEVANLSVTQRG 59
DVGAGVID DYRG V V+LFN + DF VKKGDRIAQL+CE+I +V +L VT+RG
Sbjct: 419 DVGAGVIDSDYRGEVKVLLFNFGENDFEVKKGDRIAQLVCEQIALCTYSKVESLEVTERG 478
Query: 58 DGGFGSTG 35
GGFGSTG
Sbjct: 479 AGGFGSTG 486
Score = 160 bits (388), Expect = 4e-40
Identities = 83/128 (64%), Positives = 92/128 (71%)
Frame = -2
Query: 418 AFQPVRGSEKAAGIDLMSAYDYTVPARGKELVKTDLQIELPPGCYGRVAPRSGLALKNFI 239
A +P GS +AG DL SA D VPA GK V T LQIELP G YGRVAPRSGLA K+FI
Sbjct: 40 AQKPTYGSISSAGADLYSAEDVVVPANGKLCVSTGLQIELPIGYYGRVAPRSGLAAKHFI 99
Query: 238 DVGAGVIDEDYRGNVGVVLFNHSDTDFSVKKGDRIAQLICEKIYYPVLQEVANLSVTQRG 59
DVGAGVID DYRG V V+LFN + T F VK GDRIA+LICE+I +EV +L T RG
Sbjct: 100 DVGAGVIDSDYRGEVKVLLFNFNTTAFEVKTGDRIAKLICEQIGNGTYEEVKSLPSTNRG 159
Query: 58 DGGFGSTG 35
GGFGSTG
Sbjct: 160 AGGFGSTG 167
>U96695-1|AAB57697.1| 491|Caenorhabditis elegans
deoxyuridinetriphosphatase protein.
Length = 491
Score = 169 bits (410), Expect = 9e-43
Identities = 85/125 (68%), Positives = 94/125 (75%)
Frame = -2
Query: 409 PVRGSEKAAGIDLMSAYDYTVPARGKELVKTDLQIELPPGCYGRVAPRSGLALKNFIDVG 230
P GSE+AAG DL SA D TVPA GK V T +Q+ELP G YGRVAPRSGLA K+FIDVG
Sbjct: 199 PTYGSEEAAGADLYSAEDITVPAHGKCCVSTGIQMELPFGYYGRVAPRSGLAAKHFIDVG 258
Query: 229 AGVIDEDYRGNVGVVLFNHSDTDFSVKKGDRIAQLICEKIYYPVLQEVANLSVTQRGDGG 50
AGVID DYRG V V+LFN +D F VKKGDRIAQLICEKI + V + + L T RG GG
Sbjct: 259 AGVIDSDYRGEVKVLLFNFTDNAFEVKKGDRIAQLICEKIGHCVYEAASELENTDRGAGG 318
Query: 49 FGSTG 35
FGSTG
Sbjct: 319 FGSTG 323
Score = 169 bits (410), Expect = 9e-43
Identities = 84/128 (65%), Positives = 95/128 (74%)
Frame = -2
Query: 418 AFQPVRGSEKAAGIDLMSAYDYTVPARGKELVKTDLQIELPPGCYGRVAPRSGLALKNFI 239
A P GS +AAG DL SA D TVPARGK V T +Q+ LP G YGRVAPRSGLA K+FI
Sbjct: 359 AQMPTYGSAEAAGADLYSAEDVTVPARGKLCVSTGIQMALPIGYYGRVAPRSGLAAKHFI 418
Query: 238 DVGAGVIDEDYRGNVGVVLFNHSDTDFSVKKGDRIAQLICEKIYYPVLQEVANLSVTQRG 59
DVGAGVID DYRG V V+LFN + DF VKKGDRIAQL+CE+I +V +L VT+RG
Sbjct: 419 DVGAGVIDSDYRGEVKVLLFNFGENDFEVKKGDRIAQLVCEQIALCTYSKVESLEVTERG 478
Query: 58 DGGFGSTG 35
GGFGSTG
Sbjct: 479 AGGFGSTG 486
Score = 160 bits (388), Expect = 4e-40
Identities = 83/128 (64%), Positives = 92/128 (71%)
Frame = -2
Query: 418 AFQPVRGSEKAAGIDLMSAYDYTVPARGKELVKTDLQIELPPGCYGRVAPRSGLALKNFI 239
A +P GS +AG DL SA D VPA GK V T LQIELP G YGRVAPRSGLA K+FI
Sbjct: 40 AQKPTYGSISSAGADLYSAEDVVVPANGKLCVSTGLQIELPIGYYGRVAPRSGLAAKHFI 99
Query: 238 DVGAGVIDEDYRGNVGVVLFNHSDTDFSVKKGDRIAQLICEKIYYPVLQEVANLSVTQRG 59
DVGAGVID DYRG V V+LFN + T F VK GDRIA+LICE+I +EV +L T RG
Sbjct: 100 DVGAGVIDSDYRGEVKVLLFNFNTTAFEVKTGDRIAKLICEQIGNGTYEEVKSLPSTNRG 159
Query: 58 DGGFGSTG 35
GGFGSTG
Sbjct: 160 AGGFGSTG 167
>U00048-5|AAB53832.2| 621|Caenorhabditis elegans Hypothetical
protein C05D11.7a protein.
Length = 621
Score = 29.5 bits (63), Expect = 1.0
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = -2
Query: 328 LVKTDLQIELPPGCYGRVAPRSGLALKNFIDVGAGVIDEDYRGNVGVV 185
+V+ +L++ LPP Y R ++L + D +IDE YR N ++
Sbjct: 94 IVRDELEVILPPNAYEMCTGRLVISLTRWSDHENVIIDE-YRSNADLI 140
>U00048-4|AAM15547.1| 751|Caenorhabditis elegans Hypothetical
protein C05D11.7b protein.
Length = 751
Score = 29.5 bits (63), Expect = 1.0
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = -2
Query: 328 LVKTDLQIELPPGCYGRVAPRSGLALKNFIDVGAGVIDEDYRGNVGVV 185
+V+ +L++ LPP Y R ++L + D +IDE YR N ++
Sbjct: 94 IVRDELEVILPPNAYEMCTGRLVISLTRWSDHENVIIDE-YRSNADLI 140
>Z71181-10|CAA94901.2| 678|Caenorhabditis elegans Hypothetical
protein K07C5.8 protein.
Length = 678
Score = 27.9 bits (59), Expect = 3.2
Identities = 18/63 (28%), Positives = 26/63 (41%)
Frame = -2
Query: 397 SEKAAGIDLMSAYDYTVPARGKELVKTDLQIELPPGCYGRVAPRSGLALKNFIDVGAGVI 218
SE+ D+ + VP + + Q ELP GR + G N +DV G+
Sbjct: 265 SEEKTSNDVQKNLETDVPPGIRSAIDAAAQEELPVRRQGRRSANFGYGNGNELDVALGMQ 324
Query: 217 DED 209
D D
Sbjct: 325 DND 327
>Z71177-11|CAA94873.2| 678|Caenorhabditis elegans Hypothetical
protein K07C5.8 protein.
Length = 678
Score = 27.9 bits (59), Expect = 3.2
Identities = 18/63 (28%), Positives = 26/63 (41%)
Frame = -2
Query: 397 SEKAAGIDLMSAYDYTVPARGKELVKTDLQIELPPGCYGRVAPRSGLALKNFIDVGAGVI 218
SE+ D+ + VP + + Q ELP GR + G N +DV G+
Sbjct: 265 SEEKTSNDVQKNLETDVPPGIRSAIDAAAQEELPVRRQGRRSANFGYGNGNELDVALGMQ 324
Query: 217 DED 209
D D
Sbjct: 325 DND 327
>U41556-3|AAM51519.1| 378|Caenorhabditis elegans Cysteine protease
related protein6, isoform b protein.
Length = 378
Score = 27.5 bits (58), Expect = 4.2
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = -1
Query: 116 EDLLSCVTRSC*FVCNSKG*WWIWLHWKK 30
+DLLSC +SC F CN W +W K
Sbjct: 160 DDLLSCC-KSCGFGCNGGDPLAAWRYWVK 187
>U41556-2|ABS19475.1| 369|Caenorhabditis elegans Cysteine protease
related protein6, isoform c protein.
Length = 369
Score = 27.5 bits (58), Expect = 4.2
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = -1
Query: 116 EDLLSCVTRSC*FVCNSKG*WWIWLHWKK 30
+DLLSC +SC F CN W +W K
Sbjct: 151 DDLLSCC-KSCGFGCNGGDPLAAWRYWVK 178
>U41556-1|AAK39189.1| 379|Caenorhabditis elegans Cysteine protease
related protein6, isoform a protein.
Length = 379
Score = 27.5 bits (58), Expect = 4.2
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = -1
Query: 116 EDLLSCVTRSC*FVCNSKG*WWIWLHWKK 30
+DLLSC +SC F CN W +W K
Sbjct: 161 DDLLSCC-KSCGFGCNGGDPLAAWRYWVK 188
>L39939-1|AAA98789.1| 379|Caenorhabditis elegans cathepsin B-like
cysteine proteinaseprotein.
Length = 379
Score = 27.5 bits (58), Expect = 4.2
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = -1
Query: 116 EDLLSCVTRSC*FVCNSKG*WWIWLHWKK 30
+DLLSC +SC F CN W +W K
Sbjct: 161 DDLLSCC-KSCGFGCNGGDPLAAWRYWVK 188
>L39894-1|AAA98787.1| 379|Caenorhabditis elegans cathepsin B-like
cysteine proteinaseprotein.
Length = 379
Score = 27.5 bits (58), Expect = 4.2
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = -1
Query: 116 EDLLSCVTRSC*FVCNSKG*WWIWLHWKK 30
+DLLSC +SC F CN W +W K
Sbjct: 161 DDLLSCC-KSCGFGCNGGDPLAAWRYWVK 188
>AL021481-2|CAA16334.1| 595|Caenorhabditis elegans Hypothetical
protein Y43F4B.5a protein.
Length = 595
Score = 26.2 bits (55), Expect = 9.7
Identities = 6/9 (66%), Positives = 8/9 (88%)
Frame = -1
Query: 56 WWIWLHWKK 30
WWIW +W+K
Sbjct: 340 WWIWTNWRK 348
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,879,261
Number of Sequences: 27780
Number of extensions: 170634
Number of successful extensions: 412
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 403
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 412
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 692685370
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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