Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P05_F_P23
(534 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U29613-3|AAC47062.2| 483|Caenorhabditis elegans Hypothetical pr... 46 2e-05
L14745-2|AAA27922.2| 461|Caenorhabditis elegans Hypothetical pr... 38 0.006
L14745-1|AAM15540.1| 466|Caenorhabditis elegans Hypothetical pr... 38 0.006
U13875-10|AAA21159.1| 332|Caenorhabditis elegans F-box synaptic... 31 0.52
AF040643-6|AAT81200.1| 249|Caenorhabditis elegans Hypothetical ... 30 1.2
U64849-1|AAC48052.3| 936|Caenorhabditis elegans Daf-12, redunda... 29 2.1
AC006714-11|AAN65282.3| 306|Caenorhabditis elegans F-box a prot... 29 2.1
Z22179-17|CAA80171.2| 691|Caenorhabditis elegans Hypothetical p... 28 3.7
Z22173-3|CAA80127.2| 691|Caenorhabditis elegans Hypothetical pr... 28 3.7
Z72507-1|CAA96633.2| 172|Caenorhabditis elegans Hypothetical pr... 28 4.8
Z92790-3|CAB07228.1| 383|Caenorhabditis elegans Hypothetical pr... 27 6.4
AL032647-5|CAA21693.1| 370|Caenorhabditis elegans Hypothetical ... 27 6.4
AF026206-4|AAK39309.1| 535|Caenorhabditis elegans Hypothetical ... 27 6.4
Z66513-14|CAN86619.1| 418|Caenorhabditis elegans Hypothetical p... 27 8.5
Z66513-13|CAN86618.1| 426|Caenorhabditis elegans Hypothetical p... 27 8.5
AF299333-1|AAK62992.1| 371|Caenorhabditis elegans phytochelatin... 27 8.5
AF299332-1|AAK62991.1| 371|Caenorhabditis elegans phytochelatin... 27 8.5
AC006708-26|AAF60419.1| 1724|Caenorhabditis elegans Holocentric ... 27 8.5
AC006708-25|AAK68883.1| 1758|Caenorhabditis elegans Holocentric ... 27 8.5
>U29613-3|AAC47062.2| 483|Caenorhabditis elegans Hypothetical
protein K02A6.3a protein.
Length = 483
Score = 46.0 bits (104), Expect = 2e-05
Identities = 19/36 (52%), Positives = 26/36 (72%)
Frame = +1
Query: 325 ELLALIFERLPVRDRGRAAQVCRAWRDAADRKSVWR 432
ELL IF+RLPV+++GR +QVCR W+ + K WR
Sbjct: 13 ELLEDIFQRLPVKNKGRCSQVCRQWQRGFNSKLSWR 48
>L14745-2|AAA27922.2| 461|Caenorhabditis elegans Hypothetical
protein C02F5.7a protein.
Length = 461
Score = 37.5 bits (83), Expect = 0.006
Identities = 27/83 (32%), Positives = 41/83 (49%), Gaps = 1/83 (1%)
Frame = +1
Query: 283 PTEPQGTHISRLYP-ELLALIFERLPVRDRGRAAQVCRAWRDAADRKSVWRGVEAALHLR 459
P + + I+R+ P E+L +F L + R+AQVCR+W A S W+ V+ R
Sbjct: 48 PAQVDNSLINRVLPKEVLLKVFSFLDTKALCRSAQVCRSWSILALDGSNWQRVDLFTFQR 107
Query: 460 RPAPVLFASLAXRGVRKLQVLSL 528
+ +LA R L+ LSL
Sbjct: 108 DVKTAVVENLARRCGGFLKELSL 130
>L14745-1|AAM15540.1| 466|Caenorhabditis elegans Hypothetical
protein C02F5.7b protein.
Length = 466
Score = 37.5 bits (83), Expect = 0.006
Identities = 27/83 (32%), Positives = 41/83 (49%), Gaps = 1/83 (1%)
Frame = +1
Query: 283 PTEPQGTHISRLYP-ELLALIFERLPVRDRGRAAQVCRAWRDAADRKSVWRGVEAALHLR 459
P + + I+R+ P E+L +F L + R+AQVCR+W A S W+ V+ R
Sbjct: 48 PAQVDNSLINRVLPKEVLLKVFSFLDTKALCRSAQVCRSWSILALDGSNWQRVDLFTFQR 107
Query: 460 RPAPVLFASLAXRGVRKLQVLSL 528
+ +LA R L+ LSL
Sbjct: 108 DVKTAVVENLARRCGGFLKELSL 130
>U13875-10|AAA21159.1| 332|Caenorhabditis elegans F-box synaptic
protein protein 1 protein.
Length = 332
Score = 31.1 bits (67), Expect = 0.52
Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Frame = +1
Query: 250 PHLPSAHVSEPPTEPQGTHISRLYPELLALIFERLPVRDRGRAAQVCRAWRDA--ADRKS 423
PH P P+ SRL ++L IF+ LP++D A C +W +A +
Sbjct: 64 PHSIPPRRRRSPRRPE-VSASRLPLKVLNQIFQYLPLKDLRSAMLTCHSWNNALSMEDSD 122
Query: 424 VWR 432
+W+
Sbjct: 123 IWQ 125
>AF040643-6|AAT81200.1| 249|Caenorhabditis elegans Hypothetical
protein F14D2.13 protein.
Length = 249
Score = 29.9 bits (64), Expect = 1.2
Identities = 20/52 (38%), Positives = 25/52 (48%)
Frame = +1
Query: 259 PSAHVSEPPTEPQGTHISRLYPELLALIFERLPVRDRGRAAQVCRAWRDAAD 414
P SEPPT +S + E+L I E L +R +VCR RDA D
Sbjct: 45 PETFFSEPPT------LSDMSMEVLGKIVENLDPFNRLSVRKVCRKLRDAID 90
>U64849-1|AAC48052.3| 936|Caenorhabditis elegans Daf-12, redundant
with protein 1 protein.
Length = 936
Score = 29.1 bits (62), Expect = 2.1
Identities = 16/55 (29%), Positives = 26/55 (47%)
Frame = +1
Query: 289 EPQGTHISRLYPELLALIFERLPVRDRGRAAQVCRAWRDAADRKSVWRGVEAALH 453
E Q HI+RL ELL +F LP + + V + ++ VW+ + L+
Sbjct: 156 EDQQDHINRLPEELLLKVFSFLPDKSLLACSSVSYRFNQISNSHEVWKELYCNLY 210
>AC006714-11|AAN65282.3| 306|Caenorhabditis elegans F-box a protein
protein 61 protein.
Length = 306
Score = 29.1 bits (62), Expect = 2.1
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +1
Query: 340 IFERLPVRDRGRAAQVCRAWRDAADRKSV 426
IFE+L DR R+ +VCR R A D+ V
Sbjct: 21 IFEKLEPMDRLRSRKVCRVLRAAMDKLGV 49
>Z22179-17|CAA80171.2| 691|Caenorhabditis elegans Hypothetical
protein F58A4.11 protein.
Length = 691
Score = 28.3 bits (60), Expect = 3.7
Identities = 17/53 (32%), Positives = 24/53 (45%)
Frame = +1
Query: 190 ELPSTTTRRKHRSAPYRLHRPHLPSAHVSEPPTEPQGTHISRLYPELLALIFE 348
++ S TT + S PY H P+ +E PT G + PE +A FE
Sbjct: 29 DVSSFTTTSESTSPPYSSSEHHSPTDQRTETPTSDSGN--ASFSPENVATSFE 79
>Z22173-3|CAA80127.2| 691|Caenorhabditis elegans Hypothetical
protein F58A4.11 protein.
Length = 691
Score = 28.3 bits (60), Expect = 3.7
Identities = 17/53 (32%), Positives = 24/53 (45%)
Frame = +1
Query: 190 ELPSTTTRRKHRSAPYRLHRPHLPSAHVSEPPTEPQGTHISRLYPELLALIFE 348
++ S TT + S PY H P+ +E PT G + PE +A FE
Sbjct: 29 DVSSFTTTSESTSPPYSSSEHHSPTDQRTETPTSDSGN--ASFSPENVATSFE 79
>Z72507-1|CAA96633.2| 172|Caenorhabditis elegans Hypothetical
protein F17C11.1 protein.
Length = 172
Score = 27.9 bits (59), Expect = 4.8
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = +3
Query: 414 SKICLAWRRSRSASTETCSCTVCIL 488
SK W + +A+ CSCT C+L
Sbjct: 85 SKCVFKWAFATTAAATACSCTCCLL 109
>Z92790-3|CAB07228.1| 383|Caenorhabditis elegans Hypothetical
protein H03G16.4 protein.
Length = 383
Score = 27.5 bits (58), Expect = 6.4
Identities = 17/47 (36%), Positives = 24/47 (51%)
Frame = +1
Query: 340 IFERLPVRDRGRAAQVCRAWRDAADRKSVWRGVEAALHLRRPAPVLF 480
IFE L + DR +CR ++ A DR W+ EA L + +LF
Sbjct: 86 IFENLNLADRLHLRNMCRHFKIAVDRVG-WKLKEAQLIVIERCVMLF 131
>AL032647-5|CAA21693.1| 370|Caenorhabditis elegans Hypothetical
protein Y57A10B.6 protein.
Length = 370
Score = 27.5 bits (58), Expect = 6.4
Identities = 19/64 (29%), Positives = 28/64 (43%)
Frame = +1
Query: 61 PIHTSFSENRSDAS*HVKVCSVATMSAWTEEMLSWRDERLGLTELPSTTTRRKHRSAPYR 240
PIH F+ NR + + + A EEM+S E +G ELP R+ +
Sbjct: 191 PIHGDFTHNRMEIE---MIFLAQCIKAGNEEMISTAIEFVGTDELPLEFYRKYDIALSCH 247
Query: 241 LHRP 252
L+ P
Sbjct: 248 LYCP 251
>AF026206-4|AAK39309.1| 535|Caenorhabditis elegans Hypothetical
protein T28B4.1a protein.
Length = 535
Score = 27.5 bits (58), Expect = 6.4
Identities = 14/51 (27%), Positives = 24/51 (47%)
Frame = +1
Query: 286 TEPQGTHISRLYPELLALIFERLPVRDRGRAAQVCRAWRDAADRKSVWRGV 438
TE I +L ++L IF+ L + + VC+ WR + +W+ V
Sbjct: 42 TERNQYTIEKLPDKVLRDIFQYLSPKQINQVGLVCKRWRVTSQNPLLWKFV 92
>Z66513-14|CAN86619.1| 418|Caenorhabditis elegans Hypothetical
protein F54D5.1b protein.
Length = 418
Score = 27.1 bits (57), Expect = 8.5
Identities = 16/47 (34%), Positives = 21/47 (44%)
Frame = +3
Query: 348 KTTGARQGPSCTSLSRVEGRS*SKICLAWRRSRSASTETCSCTVCIL 488
KT A Q SCT S + + IC RR+R A + S +L
Sbjct: 288 KTFDADQKNSCTECSTDQNEACKMICSEIRRTRFAEVFSSSAVAALL 334
>Z66513-13|CAN86618.1| 426|Caenorhabditis elegans Hypothetical
protein F54D5.1a protein.
Length = 426
Score = 27.1 bits (57), Expect = 8.5
Identities = 16/47 (34%), Positives = 21/47 (44%)
Frame = +3
Query: 348 KTTGARQGPSCTSLSRVEGRS*SKICLAWRRSRSASTETCSCTVCIL 488
KT A Q SCT S + + IC RR+R A + S +L
Sbjct: 296 KTFDADQKNSCTECSTDQNEACKMICSEIRRTRFAEVFSSSAVAALL 342
>AF299333-1|AAK62992.1| 371|Caenorhabditis elegans phytochelatin
synthase protein.
Length = 371
Score = 27.1 bits (57), Expect = 8.5
Identities = 16/47 (34%), Positives = 21/47 (44%)
Frame = +3
Query: 348 KTTGARQGPSCTSLSRVEGRS*SKICLAWRRSRSASTETCSCTVCIL 488
KT A Q SCT S + + IC RR+R A + S +L
Sbjct: 288 KTFDADQKNSCTECSTDQNEACKMICSEIRRTRFAEVFSSSAVAALL 334
>AF299332-1|AAK62991.1| 371|Caenorhabditis elegans phytochelatin
synthase protein.
Length = 371
Score = 27.1 bits (57), Expect = 8.5
Identities = 16/47 (34%), Positives = 21/47 (44%)
Frame = +3
Query: 348 KTTGARQGPSCTSLSRVEGRS*SKICLAWRRSRSASTETCSCTVCIL 488
KT A Q SCT S + + IC RR+R A + S +L
Sbjct: 288 KTFDADQKNSCTECSTDQNEACKMICSEIRRTRFAEVFSSSAVAALL 334
>AC006708-26|AAF60419.1| 1724|Caenorhabditis elegans Holocentric
chromosome bindingprotein protein 6, isoform a protein.
Length = 1724
Score = 27.1 bits (57), Expect = 8.5
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = +1
Query: 166 RDERLGLTELPSTTTRRKHRSAPYRLHRPHLPSAHVSEPPTE 291
R ERLG T L ++ S+ P +PS H + PPT+
Sbjct: 953 RHERLGKT-LSLIVNSTENGSSDASTVNPDMPSVHHTRPPTQ 993
>AC006708-25|AAK68883.1| 1758|Caenorhabditis elegans Holocentric
chromosome bindingprotein protein 6, isoform b protein.
Length = 1758
Score = 27.1 bits (57), Expect = 8.5
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = +1
Query: 166 RDERLGLTELPSTTTRRKHRSAPYRLHRPHLPSAHVSEPPTE 291
R ERLG T L ++ S+ P +PS H + PPT+
Sbjct: 953 RHERLGKT-LSLIVNSTENGSSDASTVNPDMPSVHHTRPPTQ 993
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,999,836
Number of Sequences: 27780
Number of extensions: 285956
Number of successful extensions: 860
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 837
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 859
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1060113800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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