Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P05_F_P22
(762 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_01_0258 + 3413874-3414163,3414230-3414380,3414524-3414832,341... 34 0.11
09_02_0362 + 7860088-7860197,7861606-7861636,7861738-7861801,786... 33 0.33
01_05_0513 - 22864657-22867899 32 0.57
07_01_0716 + 5472618-5472818,5472943-5472985,5473672-5473761,547... 31 0.76
06_03_0996 + 26731442-26732121,26732573-26732772,26732930-26733330 31 0.76
08_02_1037 - 23851750-23852132,23852622-23852784 31 1.3
06_01_0741 - 5510159-5510581,5510862-5511124,5511223-5511400,551... 30 2.3
12_01_0317 + 2417147-2417587,2417622-2418134 29 3.1
12_01_0072 + 609254-609722,610355-610421,610652-610745,610984-61... 29 3.1
10_08_0631 - 19435796-19436452,19437237-19438130 29 3.1
01_03_0260 - 14323503-14323603,14323751-14323990,14324212-143242... 29 3.1
01_01_1162 - 9253034-9254229,9254387-9254456,9254473-9254567,925... 29 3.1
03_05_0437 - 24293236-24294120 29 4.0
05_07_0146 + 28018236-28018580,28018670-28018777,28018984-280191... 29 5.3
10_01_0216 - 2329413-2330419,2331382-2331537,2332363-2332897,233... 28 7.1
09_04_0373 - 17037945-17040641 28 7.1
06_03_0969 - 26413534-26413594,26415020-26415318 28 7.1
06_01_0595 + 4287106-4287957 28 7.1
05_01_0433 - 3432675-3432922,3433043-3433304,3433413-3433567,343... 28 9.3
01_01_1063 - 8386813-8387236,8387322-8387779 28 9.3
>04_01_0258 +
3413874-3414163,3414230-3414380,3414524-3414832,
3415085-3415246
Length = 303
Score = 34.3 bits (75), Expect = 0.11
Identities = 19/54 (35%), Positives = 25/54 (46%)
Frame = +2
Query: 92 PNV*NSRKKNKNGSTADIQPGDTVRAPHPGRHVPRXACSASRXRVPPGAQRFAI 253
PN ++ NK S A P DT +A P + VP+ C S V P Q A+
Sbjct: 201 PNPAGTQSSNKEASPAS--PADTDKAAQPSKIVPQEYCDTSAASVSPKIQETAL 252
>09_02_0362 + 7860088-7860197,7861606-7861636,7861738-7861801,
7861922-7862052,7863575-7863784,7863891-7863956,
7864868-7865075,7866270-7866325,7866406-7867128,
7868246-7868299,7868667-7868695,7869501-7869585,
7870032-7870202,7870246-7870827
Length = 839
Score = 32.7 bits (71), Expect = 0.33
Identities = 27/114 (23%), Positives = 49/114 (42%), Gaps = 3/114 (2%)
Frame = -3
Query: 502 LQPVRELAEVHAVQRHLEGARLAQHQRL--EGLPVGVQRHPARRLLGAPAHVAEVVPHDA 329
LQP +L + H +Q+ L+ +L QH +L +GLP+ Q+ L +
Sbjct: 678 LQPQNQLQQQHQLQQQLQQQQLQQHMQLQTQGLPLQQQQSQGHPLQQQQMQQMQQQQQQQ 737
Query: 328 HLHEAEVEVQ-RDVVPRVRVGSALQVDREPLCAGRHSXPGCGACXPGYMPPGMG 170
+ + + + Q + + + + LQ ++P G G G P + GMG
Sbjct: 738 QIQQMQQQQQMQQMQQQQQQPQQLQQQQQPQMVG----TGMGQQQPQMVGTGMG 787
>01_05_0513 - 22864657-22867899
Length = 1080
Score = 31.9 bits (69), Expect = 0.57
Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = +3
Query: 120 IKMAVPPIYNPVIPCVHPIPGGMY-PGXHAPHPGXECRPAHRGSRSTCSADP 272
++ A PP+++P++P +H G M P H PH G P H+ +P
Sbjct: 218 VEEAPPPMHHPMMPPMHGPHGPMMPPAVHGPH-GPMAPPMHQHQHPQPQPEP 268
>07_01_0716 +
5472618-5472818,5472943-5472985,5473672-5473761,
5473863-5473938,5474435-5474504,5474911-5475075,
5475261-5475404,5475547-5475651,5475876-5476022,
5476463-5476531,5476882-5476989,5477392-5477483,
5477559-5477598,5478129-5478221,5478386-5478958,
5479596-5479610
Length = 676
Score = 31.5 bits (68), Expect = 0.76
Identities = 19/46 (41%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Frame = -1
Query: 468 PFSATLRARGSHSTSASK--VSPLACSGIPPAVSSAPQLMLLRWFR 337
P S+ + A GS +T A + S SGIPPA S P + L W R
Sbjct: 540 PSSSAVTAGGSTATIAGEGSTSDSGLSGIPPAASPPPPPLPLSWRR 585
>06_03_0996 + 26731442-26732121,26732573-26732772,26732930-26733330
Length = 426
Score = 31.5 bits (68), Expect = 0.76
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = -1
Query: 471 TPFSATLRARGSHSTSASKVSPLACSGIPPAVSSAPQL 358
T + L +G H+ +A++ + L G PP SSAPQ+
Sbjct: 309 TSVISCLPEQGKHAAAAARPTALTLGGAPPHESSAPQI 346
>08_02_1037 - 23851750-23852132,23852622-23852784
Length = 181
Score = 30.7 bits (66), Expect = 1.3
Identities = 26/78 (33%), Positives = 36/78 (46%), Gaps = 8/78 (10%)
Frame = -1
Query: 573 CA-PSNPMNCTSTSPSTV---RCEMRWY-CS---RCGNSQKCTPFSATLRARGSHSTSAS 418
CA SN ++ TSTSP+T+ M +Y C+ C K + GS S +
Sbjct: 75 CAVASNSISSTSTSPATLDLAAAGMHYYICTISGHCAGGMKLAINVGSGSGSGSGSGTPP 134
Query: 417 KVSPLACSGIPPAVSSAP 364
+P SG PPA S+P
Sbjct: 135 STTP-GSSGTPPATPSSP 151
>06_01_0741 -
5510159-5510581,5510862-5511124,5511223-5511400,
5511411-5511698,5511801-5511899,5511973-5512440,
5512559-5512744,5512887-5513004,5513035-5513228
Length = 738
Score = 29.9 bits (64), Expect = 2.3
Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Frame = -3
Query: 493 VRELAEVHAVQRHL--EGARLAQHQRLEGLPVGVQRHPARRLLGAPAHVAEVVP 338
V E + ++ + R L GA H+ L L +R+ + LG P H+A V P
Sbjct: 460 VEEKSPINVLYRDLVLSGAAFGAHRWLAALQRACERYASLVALGVPHHIAGVTP 513
>12_01_0317 + 2417147-2417587,2417622-2418134
Length = 317
Score = 29.5 bits (63), Expect = 3.1
Identities = 24/70 (34%), Positives = 33/70 (47%), Gaps = 3/70 (4%)
Frame = -1
Query: 543 STSPSTVRCEMRWYCSRCGNSQKCTPFSATLRARGSHSTSA--SKVSPLACSGIPPAVSS 370
S S + +R + S G+ CT S+T RGS + A S +S A + A SS
Sbjct: 3 SASSLLLPSSVRDFASCIGDGAACTAPSSTRTRRGSAAVQAQPSTLSVTASYRVALASSS 62
Query: 369 APQLML-LRW 343
+P L L L W
Sbjct: 63 SPPLQLRLTW 72
>12_01_0072 +
609254-609722,610355-610421,610652-610745,610984-611127
Length = 257
Score = 29.5 bits (63), Expect = 3.1
Identities = 20/77 (25%), Positives = 32/77 (41%), Gaps = 3/77 (3%)
Frame = -1
Query: 567 PSNPMNCTSTSPSTVRCEMRWYCSRCGNSQKCTPFSATLRARGSHSTSASKVSPLACSG- 391
PS P N + P + + S C S TP S A G + S + L CS
Sbjct: 41 PSTPTNPITARPRPLPSDTTAAASTCSASPSHTPVSKPSSATGETAAPQSNLCALRCSSW 100
Query: 390 --IPPAVSSAPQLMLLR 346
+ A+++A + L++
Sbjct: 101 DFLTLAIAAAEERSLVK 117
>10_08_0631 - 19435796-19436452,19437237-19438130
Length = 516
Score = 29.5 bits (63), Expect = 3.1
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = -1
Query: 420 SKVSPLACSGIPPAVSSAPQLMLLRWFRTTHISTKRKLRCS 298
SK L CS IP +S L RTT I TK+ ++C+
Sbjct: 476 SKRWHLVCSNIPNNISYLVSTFTLANCRTTDIGTKKVMQCA 516
>01_03_0260 - 14323503-14323603,14323751-14323990,14324212-14324275,
14324349-14324654,14324841-14325055,14325551-14325845,
14325965-14326129,14326324-14327352,14333553-14333814,
14334135-14334631,14338714-14340123
Length = 1527
Score = 29.5 bits (63), Expect = 3.1
Identities = 14/27 (51%), Positives = 16/27 (59%)
Frame = -1
Query: 387 PPAVSSAPQLMLLRWFRTTHISTKRKL 307
P V P LML WFR +IST R+L
Sbjct: 1105 PSVVLVVPLLMLNLWFRKYYISTSREL 1131
>01_01_1162 -
9253034-9254229,9254387-9254456,9254473-9254567,
9255344-9255487,9255514-9255622
Length = 537
Score = 29.5 bits (63), Expect = 3.1
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = +1
Query: 697 VGALSTPAPRTAPCHTPXDAPS 762
+GA STP+PR AP DAPS
Sbjct: 242 LGAASTPSPRPAPATPLPDAPS 263
>03_05_0437 - 24293236-24294120
Length = 294
Score = 29.1 bits (62), Expect = 4.0
Identities = 19/62 (30%), Positives = 29/62 (46%)
Frame = -1
Query: 405 LACSGIPPAVSSAPQLMLLRWFRTTHISTKRKLRCSAMSSRGSVLGPHCRLIANLCAPGG 226
LA +PPA + +L RW R TH+ K S+ + + L HC +A L G
Sbjct: 131 LALPELPPADDARLPSLLPRWRRLTHLELDSK--PSSFPAVAAALALHCPDLAVLRVTSG 188
Query: 225 TL 220
++
Sbjct: 189 SV 190
>05_07_0146 +
28018236-28018580,28018670-28018777,28018984-28019148,
28019269-28019736,28019823-28019936,28020038-28020715
Length = 625
Score = 28.7 bits (61), Expect = 5.3
Identities = 26/100 (26%), Positives = 49/100 (49%), Gaps = 5/100 (5%)
Frame = -3
Query: 529 HREVRDALVLQP--VRELAEVHAVQRHLEGARLAQHQRLEGLPVGVQRHPARRLLGAPAH 356
HRE + AL + + L+E + +++ ++ L+ V + + R +L AP H
Sbjct: 145 HREAKAALAVTKAEIGRLSEENKRLKNMLSNVTTKYNSLQMQFVTLMQQ-RRSVLAAPIH 203
Query: 355 VAEVVPHDAHLHEAEVEVQRDVVPR--VRVGSA-LQVDRE 245
E++ + E + Q+ ++PR + +GSA LQ D E
Sbjct: 204 QQELLDPEKKEQEGSQQQQQQLIPRQFISLGSASLQPDVE 243
>10_01_0216 -
2329413-2330419,2331382-2331537,2332363-2332897,
2333026-2333514
Length = 728
Score = 28.3 bits (60), Expect = 7.1
Identities = 19/78 (24%), Positives = 37/78 (47%), Gaps = 4/78 (5%)
Frame = -1
Query: 495 RCGNSQKCTPFSATLRA-RGSH---STSASKVSPLACSGIPPAVSSAPQLMLLRWFRTTH 328
R G KC T ++ RG+ + + + +ACSG+PP V A ++ L + + T
Sbjct: 410 RIGEGFKCKYCKMTRKSGRGTRLKEHLAGRRHNVIACSGVPPKVRKAMRISLNKVKQRTK 469
Query: 327 ISTKRKLRCSAMSSRGSV 274
+ R+ + +++ V
Sbjct: 470 AAKNRRAKMKKPNTQNMV 487
>09_04_0373 - 17037945-17040641
Length = 898
Score = 28.3 bits (60), Expect = 7.1
Identities = 21/75 (28%), Positives = 33/75 (44%), Gaps = 5/75 (6%)
Frame = -1
Query: 525 VRCEMRWYCSRCGNSQKCT-P--FSATLRARGS--HSTSASKVSPLACSGIPPAVSSAPQ 361
++C YCS GN CT P F+A++ GS ++ SP AC + A
Sbjct: 293 LQCPSLGYCSPAGNGSTCTCPPLFAASVTVAGSCTPGDGSTLASPAACQNNDSSSGGASV 352
Query: 360 LMLLRWFRTTHISTK 316
+ T++ +TK
Sbjct: 353 SYIALKPLTSYFATK 367
>06_03_0969 - 26413534-26413594,26415020-26415318
Length = 119
Score = 28.3 bits (60), Expect = 7.1
Identities = 26/82 (31%), Positives = 34/82 (41%)
Frame = -1
Query: 591 LAGGGGCAPSNPMNCTSTSPSTVRCEMRWYCSRCGNSQKCTPFSATLRARGSHSTSASKV 412
LAGG A +P R RW SR +Q +A R+RG T A +
Sbjct: 19 LAGGDEAAQGSPAAAARRRSRAARATARWR-SRAA-AQGSPAAAARRRSRG---TQARR- 72
Query: 411 SPLACSGIPPAVSSAPQLMLLR 346
P A + PPA++ PQ R
Sbjct: 73 -PPAAARRPPAMARGPQAQARR 93
>06_01_0595 + 4287106-4287957
Length = 283
Score = 28.3 bits (60), Expect = 7.1
Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = -1
Query: 306 RCSAMSSRGSVLGPHCRLIAN-LCAPGGTLXLDAEHAXLGTCRPGWGARTVSPGCISAV 133
R A+++RG+ L CR A L GG + + +G+ RPG+GA + + A+
Sbjct: 145 RAFAVNARGTFLC--CREAARRLARGGGGRVVTFSSSNVGSLRPGYGAYVATKAAVEAM 201
>05_01_0433 -
3432675-3432922,3433043-3433304,3433413-3433567,
3433720-3433905,3435829-3436132
Length = 384
Score = 27.9 bits (59), Expect = 9.3
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +2
Query: 383 GGMPLHANGETFEALVLCEPRALKVALNGVHFCEF 487
GG P + F LCEP + ++ +GVHF +F
Sbjct: 315 GGPPYNFKPGKFGCDDLCEPGSKVLSWDGVHFTDF 349
>01_01_1063 - 8386813-8387236,8387322-8387779
Length = 293
Score = 27.9 bits (59), Expect = 9.3
Identities = 13/26 (50%), Positives = 14/26 (53%)
Frame = +3
Query: 168 HPIPGGMYPGXHAPHPGXECRPAHRG 245
HP+ GG Y G APHPG P G
Sbjct: 223 HPV-GGYYVGHGAPHPGMPPPPMPYG 247
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,463,324
Number of Sequences: 37544
Number of extensions: 461636
Number of successful extensions: 2108
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1962
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2104
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2039640244
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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