Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_F_P19
         (641 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    23   2.8  
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    23   2.8  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    22   4.9  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   6.5  

>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = +3

Query: 186 ADRDIWPIVLHAIFGTLARIFSSCG 260
           A + +WP  L AI+G+L  + +  G
Sbjct: 205 AAKHMWPADLEAIYGSLKNLNTDHG 229


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = +3

Query: 186 ADRDIWPIVLHAIFGTLARIFSSCG 260
           A + +WP  L AI+G+L  + +  G
Sbjct: 205 AAKHMWPADLEAIYGSLKNLNTDHG 229


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 5/15 (33%), Positives = 12/15 (80%)
 Frame = -2

Query: 556 HRHLHRDLQNNILVL 512
           + + H DL+NN++++
Sbjct: 329 NNYFHMDLENNVIII 343


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -1

Query: 308 PSAFPIMYPIISPLGD 261
           P  FP+  P+ SP GD
Sbjct: 188 PGVFPVDAPMHSPPGD 203


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 142,008
Number of Sequences: 336
Number of extensions: 2909
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16448590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)