Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P05_F_P16
(718 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY102697-1|AAM27526.1| 361|Drosophila melanogaster RE16764p pro... 198 8e-51
AY032977-1|AAK54456.1| 361|Drosophila melanogaster microtubule-... 198 8e-51
AE014297-4153|AAF56732.2| 361|Drosophila melanogaster CG31057-P... 198 8e-51
AE014297-3723|AAF56403.2| 1150|Drosophila melanogaster CG31510-P... 32 0.90
AE014296-1672|AAF50256.3| 2351|Drosophila melanogaster CG3654-PD... 31 1.6
DQ168463-1|AAZ81897.1| 1522|Drosophila melanogaster BBG-LP12 pro... 30 2.7
DQ168462-1|AAZ81896.1| 1842|Drosophila melanogaster PDZ domain-c... 30 2.7
AE014296-2385|AAF49738.1| 1552|Drosophila melanogaster CG9587-PA... 30 2.7
AY071708-1|AAL49330.1| 264|Drosophila melanogaster RH22958p pro... 25 2.8
AE013599-94|AAF57321.3| 264|Drosophila melanogaster CG1298-PA p... 25 2.8
U43504-1|AAC46955.1| 618|Drosophila melanogaster DmORC2 protein. 30 3.6
AF067153-1|AAC18395.1| 1171|Drosophila melanogaster PIP82 protei... 30 3.6
AY061360-1|AAL28908.1| 715|Drosophila melanogaster LD28629p pro... 29 6.3
AL121804-8|CAB65860.1| 1066|Drosophila melanogaster EG:155E2.3,F... 29 6.3
AL024485-1|CAA19676.1| 1066|Drosophila melanogaster EG:155E2.3,F... 29 6.3
AE014296-2863|AAF49380.1| 715|Drosophila melanogaster CG7729-PA... 29 6.3
AY166585-1|AAN86032.1| 990|Drosophila melanogaster HAMLET protein. 29 8.4
AE014298-1194|AAF46386.3| 1195|Drosophila melanogaster CG11219-P... 29 8.4
AE014134-2973|AAF53703.3| 1108|Drosophila melanogaster CG31753-P... 29 8.4
>AY102697-1|AAM27526.1| 361|Drosophila melanogaster RE16764p
protein.
Length = 361
Score = 198 bits (482), Expect = 8e-51
Identities = 105/184 (57%), Positives = 122/184 (66%), Gaps = 12/184 (6%)
Frame = +3
Query: 201 EGDNDSGVDESTQGNDLNGSPSSPNKKIVNKTPTKEXXXXXXXXXXXXXXXXXXTAKTPE 380
EGDNDSGVDESTQ D NG P+SP+ + KTPT P+
Sbjct: 82 EGDNDSGVDESTQEKDRNG-PNSPSSPV--KTPTSTSSKPDKSGTSRPPSATPSNKSAPK 138
Query: 381 ------------IPTPTEKKKVPMNKVQVGNAPSPNLKAVKSKIGSLDNATYKPGGGKVK 524
P P KKVPMNKVQVG+APSPNLKAV+SKIGSLDNATYKPGGG VK
Sbjct: 139 SRSASKNRLLLKTPEPEPVKKVPMNKVQVGHAPSPNLKAVRSKIGSLDNATYKPGGGHVK 198
Query: 525 IENRKLEFGNITPKIAAKNEAYTPSGGAKKIVTNKLEWNAKSKVGSLXNASYKPGGGDKK 704
IE++K++ P+I AKN+ Y P GG KKIVT KL+WNAKSK+GSL NA++KPGGGDKK
Sbjct: 199 IESKKIDI-KAAPRIEAKNDKYMPKGGEKKIVTTKLQWNAKSKIGSLENAAHKPGGGDKK 257
Query: 705 IETV 716
IET+
Sbjct: 258 IETL 261
Score = 91.1 bits (216), Expect = 1e-18
Identities = 47/83 (56%), Positives = 58/83 (69%), Gaps = 2/83 (2%)
Frame = +3
Query: 465 KSKIGSLDNATYKPGGGKVKIENRKLEFGN-ITPKIAAK-NEAYTPSGGAKKIVTNKLEW 638
KSKIGSL+NA +KPGGG KIE K++F + PK+ + N + P GG KI T KLE
Sbjct: 238 KSKIGSLENAAHKPGGGDKKIETLKMDFKDKAKPKVGSTANVKHQPGGGDIKIQTQKLEI 297
Query: 639 NAKSKVGSLXNASYKPGGGDKKI 707
A+SKVGSL N +KPGGG+KKI
Sbjct: 298 KAQSKVGSLDNVKHKPGGGEKKI 320
Score = 46.8 bits (106), Expect = 3e-05
Identities = 22/55 (40%), Positives = 32/55 (58%)
Frame = +3
Query: 465 KSKIGSLDNATYKPGGGKVKIENRKLEFGNITPKIAAKNEAYTPSGGAKKIVTNK 629
K K+GS N ++PGGG +KI+ +KLE + + N + P GG KKI +K
Sbjct: 270 KPKVGSTANVKHQPGGGDIKIQTQKLEIKAQSKVGSLDNVKHKPGGGEKKIFDDK 324
Score = 37.9 bits (84), Expect = 0.014
Identities = 17/36 (47%), Positives = 24/36 (66%)
Frame = +3
Query: 465 KSKIGSLDNATYKPGGGKVKIENRKLEFGNITPKIA 572
+SK+GSLDN +KPGGG+ KI + K N+ +A
Sbjct: 300 QSKVGSLDNVKHKPGGGEKKIFDDKDYLKNVEHSVA 335
>AY032977-1|AAK54456.1| 361|Drosophila melanogaster
microtubule-associated tau protein protein.
Length = 361
Score = 198 bits (482), Expect = 8e-51
Identities = 105/184 (57%), Positives = 122/184 (66%), Gaps = 12/184 (6%)
Frame = +3
Query: 201 EGDNDSGVDESTQGNDLNGSPSSPNKKIVNKTPTKEXXXXXXXXXXXXXXXXXXTAKTPE 380
EGDNDSGVDESTQ D NG P+SP+ + KTPT P+
Sbjct: 82 EGDNDSGVDESTQEKDRNG-PNSPSSPV--KTPTSTSSKPDKSGTSRPPSATPSNKSAPK 138
Query: 381 ------------IPTPTEKKKVPMNKVQVGNAPSPNLKAVKSKIGSLDNATYKPGGGKVK 524
P P KKVPMNKVQVG+APSPNLKAV+SKIGSLDNATYKPGGG VK
Sbjct: 139 SRSASKNRLLLKTPEPEPVKKVPMNKVQVGHAPSPNLKAVRSKIGSLDNATYKPGGGHVK 198
Query: 525 IENRKLEFGNITPKIAAKNEAYTPSGGAKKIVTNKLEWNAKSKVGSLXNASYKPGGGDKK 704
IE++K++ P+I AKN+ Y P GG KKIVT KL+WNAKSK+GSL NA++KPGGGDKK
Sbjct: 199 IESKKIDI-KAAPRIEAKNDKYMPKGGEKKIVTTKLQWNAKSKIGSLENAAHKPGGGDKK 257
Query: 705 IETV 716
IET+
Sbjct: 258 IETL 261
Score = 91.1 bits (216), Expect = 1e-18
Identities = 47/83 (56%), Positives = 58/83 (69%), Gaps = 2/83 (2%)
Frame = +3
Query: 465 KSKIGSLDNATYKPGGGKVKIENRKLEFGN-ITPKIAAK-NEAYTPSGGAKKIVTNKLEW 638
KSKIGSL+NA +KPGGG KIE K++F + PK+ + N + P GG KI T KLE
Sbjct: 238 KSKIGSLENAAHKPGGGDKKIETLKMDFKDKAKPKVGSTANVKHQPGGGDIKIQTQKLEI 297
Query: 639 NAKSKVGSLXNASYKPGGGDKKI 707
A+SKVGSL N +KPGGG+KKI
Sbjct: 298 KAQSKVGSLDNVKHKPGGGEKKI 320
Score = 46.8 bits (106), Expect = 3e-05
Identities = 22/55 (40%), Positives = 32/55 (58%)
Frame = +3
Query: 465 KSKIGSLDNATYKPGGGKVKIENRKLEFGNITPKIAAKNEAYTPSGGAKKIVTNK 629
K K+GS N ++PGGG +KI+ +KLE + + N + P GG KKI +K
Sbjct: 270 KPKVGSTANVKHQPGGGDIKIQTQKLEIKAQSKVGSLDNVKHKPGGGEKKIFDDK 324
Score = 37.9 bits (84), Expect = 0.014
Identities = 17/36 (47%), Positives = 24/36 (66%)
Frame = +3
Query: 465 KSKIGSLDNATYKPGGGKVKIENRKLEFGNITPKIA 572
+SK+GSLDN +KPGGG+ KI + K N+ +A
Sbjct: 300 QSKVGSLDNVKHKPGGGEKKIFDDKDYLKNVEHSVA 335
>AE014297-4153|AAF56732.2| 361|Drosophila melanogaster CG31057-PA
protein.
Length = 361
Score = 198 bits (482), Expect = 8e-51
Identities = 105/184 (57%), Positives = 122/184 (66%), Gaps = 12/184 (6%)
Frame = +3
Query: 201 EGDNDSGVDESTQGNDLNGSPSSPNKKIVNKTPTKEXXXXXXXXXXXXXXXXXXTAKTPE 380
EGDNDSGVDESTQ D NG P+SP+ + KTPT P+
Sbjct: 82 EGDNDSGVDESTQEKDRNG-PNSPSSPV--KTPTSTSSKPDKSGTSRPPSATPSNKSAPK 138
Query: 381 ------------IPTPTEKKKVPMNKVQVGNAPSPNLKAVKSKIGSLDNATYKPGGGKVK 524
P P KKVPMNKVQVG+APSPNLKAV+SKIGSLDNATYKPGGG VK
Sbjct: 139 SRSASKNRLLLKTPEPEPVKKVPMNKVQVGHAPSPNLKAVRSKIGSLDNATYKPGGGHVK 198
Query: 525 IENRKLEFGNITPKIAAKNEAYTPSGGAKKIVTNKLEWNAKSKVGSLXNASYKPGGGDKK 704
IE++K++ P+I AKN+ Y P GG KKIVT KL+WNAKSK+GSL NA++KPGGGDKK
Sbjct: 199 IESKKIDI-KAAPRIEAKNDKYMPKGGEKKIVTTKLQWNAKSKIGSLENAAHKPGGGDKK 257
Query: 705 IETV 716
IET+
Sbjct: 258 IETL 261
Score = 91.1 bits (216), Expect = 1e-18
Identities = 47/83 (56%), Positives = 58/83 (69%), Gaps = 2/83 (2%)
Frame = +3
Query: 465 KSKIGSLDNATYKPGGGKVKIENRKLEFGN-ITPKIAAK-NEAYTPSGGAKKIVTNKLEW 638
KSKIGSL+NA +KPGGG KIE K++F + PK+ + N + P GG KI T KLE
Sbjct: 238 KSKIGSLENAAHKPGGGDKKIETLKMDFKDKAKPKVGSTANVKHQPGGGDIKIQTQKLEI 297
Query: 639 NAKSKVGSLXNASYKPGGGDKKI 707
A+SKVGSL N +KPGGG+KKI
Sbjct: 298 KAQSKVGSLDNVKHKPGGGEKKI 320
Score = 46.8 bits (106), Expect = 3e-05
Identities = 22/55 (40%), Positives = 32/55 (58%)
Frame = +3
Query: 465 KSKIGSLDNATYKPGGGKVKIENRKLEFGNITPKIAAKNEAYTPSGGAKKIVTNK 629
K K+GS N ++PGGG +KI+ +KLE + + N + P GG KKI +K
Sbjct: 270 KPKVGSTANVKHQPGGGDIKIQTQKLEIKAQSKVGSLDNVKHKPGGGEKKIFDDK 324
Score = 37.9 bits (84), Expect = 0.014
Identities = 17/36 (47%), Positives = 24/36 (66%)
Frame = +3
Query: 465 KSKIGSLDNATYKPGGGKVKIENRKLEFGNITPKIA 572
+SK+GSLDN +KPGGG+ KI + K N+ +A
Sbjct: 300 QSKVGSLDNVKHKPGGGEKKIFDDKDYLKNVEHSVA 335
>AE014297-3723|AAF56403.2| 1150|Drosophila melanogaster CG31510-PA
protein.
Length = 1150
Score = 31.9 bits (69), Expect = 0.90
Identities = 32/142 (22%), Positives = 46/142 (32%), Gaps = 6/142 (4%)
Frame = +3
Query: 105 LSSTKRAYQVHLKMAEVNDGVAVEKHVEKHNTEGDNDSGVDESTQGNDLNGSPSS-PNKK 281
L TK Q+ + ++ + +N + D N L S P K
Sbjct: 306 LEQTKPTVQIPSQTPSKPQSTKAVQNAKSNNADLARSKTTDPDIVKNPLATKISCVPLAK 365
Query: 282 IVNKTPTKEXXXXXXXXXXXXXXXXXXTAKTP-----EIPTPTEKKKVPMNKVQVGNAPS 446
++N TP +E T K P P P K P+N V P+
Sbjct: 366 LINSTPEREKDLVIIDDLPKEATKPPETPKKPIPVQTSNPKPVIAAKKPINVVAQPVRPT 425
Query: 447 PNLKAVKSKIGSLDNATYKPGG 512
N S + D T +PGG
Sbjct: 426 INKVVKPSYVAPKDYTTARPGG 447
>AE014296-1672|AAF50256.3| 2351|Drosophila melanogaster CG3654-PD
protein.
Length = 2351
Score = 31.1 bits (67), Expect = 1.6
Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = +3
Query: 366 AKTPEIPTPTEKKKVP-MNKVQVGNAPSPNLKAVKSKIGSLDNATYKPGGGKVKIENRKL 542
A+ + P P + + P NKV G A P ++ + K GSL + + K K E+ K+
Sbjct: 721 AEEEKPPPPARRGRPPKQNKVNAGPAHKPRIEGMLVKKGSLAKMSEQQAKPKAKSEHSKV 780
Query: 543 E 545
+
Sbjct: 781 D 781
>DQ168463-1|AAZ81897.1| 1522|Drosophila melanogaster BBG-LP12 protein.
Length = 1522
Score = 30.3 bits (65), Expect = 2.7
Identities = 17/44 (38%), Positives = 23/44 (52%)
Frame = +3
Query: 375 PEIPTPTEKKKVPMNKVQVGNAPSPNLKAVKSKIGSLDNATYKP 506
P+ P PT K K+P+N + +AP P V SK L + KP
Sbjct: 1317 PKPPVPTNKPKMPVNLTKPKSAPPP----VPSKRSELSGSGGKP 1356
>DQ168462-1|AAZ81896.1| 1842|Drosophila melanogaster PDZ
domain-containing proteinBBG-LP10 protein.
Length = 1842
Score = 30.3 bits (65), Expect = 2.7
Identities = 17/44 (38%), Positives = 23/44 (52%)
Frame = +3
Query: 375 PEIPTPTEKKKVPMNKVQVGNAPSPNLKAVKSKIGSLDNATYKP 506
P+ P PT K K+P+N + +AP P V SK L + KP
Sbjct: 534 PKPPVPTNKPKMPVNLTKPKSAPPP----VPSKRSELSGSGGKP 573
>AE014296-2385|AAF49738.1| 1552|Drosophila melanogaster CG9587-PA
protein.
Length = 1552
Score = 30.3 bits (65), Expect = 2.7
Identities = 17/44 (38%), Positives = 23/44 (52%)
Frame = +3
Query: 375 PEIPTPTEKKKVPMNKVQVGNAPSPNLKAVKSKIGSLDNATYKP 506
P+ P PT K K+P+N + +AP P V SK L + KP
Sbjct: 1329 PKPPVPTNKPKMPVNLTKPKSAPPP----VPSKRSELSGSGGKP 1368
>AY071708-1|AAL49330.1| 264|Drosophila melanogaster RH22958p
protein.
Length = 264
Score = 24.6 bits (51), Expect(2) = 2.8
Identities = 9/22 (40%), Positives = 11/22 (50%)
Frame = -3
Query: 470 RFHGF*IWRRCIPNLNFIHRYF 405
RF +W C N IHR+F
Sbjct: 42 RFTNLGLWEVCFNNFQDIHRFF 63
Score = 24.2 bits (50), Expect(2) = 2.8
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = -3
Query: 290 VYDFLVRRARRSIEIISLCRFVNSAVVISLCVMFFHVLLDSN 165
++DFL+ S+++ + FV VVI L V F D +
Sbjct: 81 IHDFLLPGFYISVQLFATLCFVMCLVVIPLTVAFLRTSRDDD 122
>AE013599-94|AAF57321.3| 264|Drosophila melanogaster CG1298-PA
protein.
Length = 264
Score = 24.6 bits (51), Expect(2) = 2.8
Identities = 9/22 (40%), Positives = 11/22 (50%)
Frame = -3
Query: 470 RFHGF*IWRRCIPNLNFIHRYF 405
RF +W C N IHR+F
Sbjct: 42 RFTNLGLWEVCFNNFQDIHRFF 63
Score = 24.2 bits (50), Expect(2) = 2.8
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = -3
Query: 290 VYDFLVRRARRSIEIISLCRFVNSAVVISLCVMFFHVLLDSN 165
++DFL+ S+++ + FV VVI L V F D +
Sbjct: 81 IHDFLLPGFYISVQLFATLCFVMCLVVIPLTVAFLRTSRDDD 122
>U43504-1|AAC46955.1| 618|Drosophila melanogaster DmORC2 protein.
Length = 618
Score = 29.9 bits (64), Expect = 3.6
Identities = 26/95 (27%), Positives = 42/95 (44%), Gaps = 9/95 (9%)
Frame = +3
Query: 363 TAKTPE--IPTPTEKKKVPMNKVQVGNAPSPNLKAVKSKIG-------SLDNATYKPGGG 515
T KTP + TP K+K M++ + +K +KI S D + ++P
Sbjct: 157 TPKTPRLGVKTPDTKRKKSMDQPKTPAHVRTRVKKQIAKIVADSDEDFSGDESDFRPSDE 216
Query: 516 KVKIENRKLEFGNITPKIAAKNEAYTPSGGAKKIV 620
+ + + GN + AA +E TPS G + IV
Sbjct: 217 ESSSSSSSSDAGNSSDNDAADDEPKTPSRGRRAIV 251
>AF067153-1|AAC18395.1| 1171|Drosophila melanogaster PIP82 protein
protein.
Length = 1171
Score = 29.9 bits (64), Expect = 3.6
Identities = 24/114 (21%), Positives = 45/114 (39%), Gaps = 2/114 (1%)
Frame = +3
Query: 366 AKTPEIPTPTEKKKVPMNKVQVGNAPSPNLKAVKSKIGSLDNATYKPGGGKVKIENRKLE 545
AK P++ P K+ K+ + N + GS + +++ + +
Sbjct: 48 AKLPQLKLPKSLPKLRGRKIFRSSKSGSNAAGGGTAAGSAKDGAGAAQQTHLQVAGQSQQ 107
Query: 546 FGNITPKIAAKNEAYTPSGGAKKIVTN--KLEWNAKSKVGSLXNASYKPGGGDK 701
F N TP+ + + G ++I N + + GSL + Y PG GD+
Sbjct: 108 FINRTPQRISTISSLMYEGEQEEIRANLGQSQPGTYRSAGSLDDDYYAPGSGDR 161
>AY061360-1|AAL28908.1| 715|Drosophila melanogaster LD28629p
protein.
Length = 715
Score = 29.1 bits (62), Expect = 6.3
Identities = 12/49 (24%), Positives = 24/49 (48%)
Frame = +3
Query: 87 CRHDKALSSTKRAYQVHLKMAEVNDGVAVEKHVEKHNTEGDNDSGVDES 233
C +++L +QV+ + G AV+ +E + E DN+ +D +
Sbjct: 336 CTEEESLMFAALQFQVNHHVDHTPQGAAVDSGIETSSQENDNEDEIDSA 384
>AL121804-8|CAB65860.1| 1066|Drosophila melanogaster
EG:155E2.3,FBgn0003371;sgg protein.
Length = 1066
Score = 29.1 bits (62), Expect = 6.3
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = +3
Query: 96 DKALSSTKRAYQVHLKMAEVNDGVAVEKHVEKHNTEGDNDSGV 224
D + R ++ + E +DGV V+ VE+ + + DN SG+
Sbjct: 239 DDDVDCDDRGSEIEEEEEEEDDGVNVDDDVEEADNQSDNQSGI 281
>AL024485-1|CAA19676.1| 1066|Drosophila melanogaster
EG:155E2.3,FBgn0003371;sgg protein.
Length = 1066
Score = 29.1 bits (62), Expect = 6.3
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = +3
Query: 96 DKALSSTKRAYQVHLKMAEVNDGVAVEKHVEKHNTEGDNDSGV 224
D + R ++ + E +DGV V+ VE+ + + DN SG+
Sbjct: 239 DDDVDCDDRGSEIEEEEEEEDDGVNVDDDVEEADNQSDNQSGI 281
>AE014296-2863|AAF49380.1| 715|Drosophila melanogaster CG7729-PA
protein.
Length = 715
Score = 29.1 bits (62), Expect = 6.3
Identities = 12/49 (24%), Positives = 24/49 (48%)
Frame = +3
Query: 87 CRHDKALSSTKRAYQVHLKMAEVNDGVAVEKHVEKHNTEGDNDSGVDES 233
C +++L +QV+ + G AV+ +E + E DN+ +D +
Sbjct: 336 CTEEESLMFAALQFQVNHHVDHTPQGAAVDSGIETSSQENDNEDEIDSA 384
>AY166585-1|AAN86032.1| 990|Drosophila melanogaster HAMLET protein.
Length = 990
Score = 28.7 bits (61), Expect = 8.4
Identities = 11/41 (26%), Positives = 23/41 (56%)
Frame = +3
Query: 90 RHDKALSSTKRAYQVHLKMAEVNDGVAVEKHVEKHNTEGDN 212
RH + + + +R ++ L +++HV+KH +EG+N
Sbjct: 862 RHVRNIHNKERPFRCELCDRSFGQQTNLDRHVKKHESEGNN 902
>AE014298-1194|AAF46386.3| 1195|Drosophila melanogaster CG11219-PA
protein.
Length = 1195
Score = 28.7 bits (61), Expect = 8.4
Identities = 24/114 (21%), Positives = 45/114 (39%), Gaps = 2/114 (1%)
Frame = +3
Query: 366 AKTPEIPTPTEKKKVPMNKVQVGNAPSPNLKAVKSKIGSLDNATYKPGGGKVKIENRKLE 545
AK P++ P K+ K+ + N + GS + +++ + +
Sbjct: 72 AKLPQLKLPKSLPKLRGRKIFRSSKSGSNAAGGGTAGGSAKDGAGAAQQTHLQVAGQSQQ 131
Query: 546 FGNITPKIAAKNEAYTPSGGAKKIVTN--KLEWNAKSKVGSLXNASYKPGGGDK 701
F N TP+ + + G ++I N + + GSL + Y PG GD+
Sbjct: 132 FINRTPQRISTISSLMYEGEQEEIRANLGQSQPGTYRSAGSLDDDYYAPGSGDR 185
>AE014134-2973|AAF53703.3| 1108|Drosophila melanogaster CG31753-PA
protein.
Length = 1108
Score = 28.7 bits (61), Expect = 8.4
Identities = 11/41 (26%), Positives = 23/41 (56%)
Frame = +3
Query: 90 RHDKALSSTKRAYQVHLKMAEVNDGVAVEKHVEKHNTEGDN 212
RH + + + +R ++ L +++HV+KH +EG+N
Sbjct: 980 RHVRNIHNKERPFRCELCDRSFGQQTNLDRHVKKHESEGNN 1020
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,374,839
Number of Sequences: 53049
Number of extensions: 684702
Number of successful extensions: 2045
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1879
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2023
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3190721655
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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