Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_F_P15
         (760 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory pro...    25   0.87 
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    24   1.5  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   6.1  
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    21   8.1  

>DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory
           protein 19 protein.
          Length = 119

 Score = 24.6 bits (51), Expect = 0.87
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +2

Query: 608 LWCQRKTAPYKNVNV 652
           +WC++ T  Y N+NV
Sbjct: 14  VWCEQYTTKYDNINV 28


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 13/39 (33%), Positives = 18/39 (46%)
 Frame = +3

Query: 387 PSPTVAKCDSTKSLTSTRHSTSSPQKV*SLCQLVPKKSS 503
           PSP+          TST + T S + V + C  VP  +S
Sbjct: 75  PSPSSTPSSLPTQRTSTSNPTYSSRSVMTSCSSVPTTAS 113


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +2

Query: 671  FKDGLAFCALIHRHR 715
            F +G+  C+LIHR +
Sbjct: 1168 FTEGIWICSLIHRKK 1182


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = -2

Query: 684 RPSLNDRWKXWTLTFLYGAVLR*HQSNR 601
           RP+L + WK   +  +Y   LR +  NR
Sbjct: 468 RPALIEGWKVEKIQEIYLEALRAYVDNR 495


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,539
Number of Sequences: 336
Number of extensions: 3378
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20338724
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)