Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P05_F_P15
(760 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_05_0108 + 18183250-18183336,18183451-18183962,18184074-181842... 61 1e-09
02_04_0414 - 22685981-22686178,22686374-22686465,22686580-226866... 47 2e-05
02_05_0540 + 29852109-29852195,29852304-29852477,29852585-298528... 46 3e-05
12_02_1070 - 25814741-25815850 34 0.14
01_06_0619 - 30650665-30651138 34 0.14
03_02_0234 + 6625417-6626184,6626314-6626339,6626435-6626531,662... 31 0.75
10_01_0112 - 1386762-1386953,1387228-1387309,1387399-1387509,138... 30 2.3
05_02_0139 + 7041030-7041188,7041451-7042215,7044133-7044519 30 2.3
04_04_1093 + 30825722-30826168,30826457-30826608,30826926-308270... 30 2.3
10_08_1005 - 22179407-22180122,22180210-22180653,22180737-221808... 29 4.0
03_05_1070 + 30125131-30127029 29 5.3
07_01_0974 + 8211602-8212051 28 7.0
05_06_0152 - 26008495-26009074,26010555-26011361,26016536-260166... 28 7.0
02_01_0148 - 1051121-1051192,1051378-1051512,1052343-1052396,105... 28 7.0
12_02_0126 + 13958247-13958298,13958422-13958972,13959076-13960047 28 9.3
05_04_0272 + 19624898-19625071,19625909-19626370,19626471-196269... 28 9.3
05_04_0139 + 18355597-18355696,18356665-18356778,18357118-183572... 28 9.3
02_02_0009 + 6068260-6068591,6068797-6068917,6069034-6069122,606... 28 9.3
>01_05_0108 +
18183250-18183336,18183451-18183962,18184074-18184245,
18184984-18185022,18185117-18185185,18185281-18185397,
18185842-18186056,18187085-18187240,18187328-18187527,
18187927-18188084,18188321-18188417,18188738-18188829,
18189018-18189191
Length = 695
Score = 60.9 bits (141), Expect = 1e-09
Identities = 50/190 (26%), Positives = 94/190 (49%), Gaps = 14/190 (7%)
Frame = +2
Query: 221 GLLDPAWEKQQKKTFTAWCNSHLRKAGTGIENIEDDFRNGLKLMLLLEVISGETL--PKP 394
GL D A +++++F W NS T I N+ +D RNG L+ +++ I+ ++
Sbjct: 419 GLSDDAQVSREERSFRLWINS--LGISTYINNVFEDLRNGWVLLEVIDKIAPGSVNWKMA 476
Query: 395 DRG--KMRFHKIANVNKALDFIASKGVKLVSIGAEEIVDGNLKMTLGMIWTIILRFAIQD 568
+R K+ F K+ N N+ L LV+I +IV GN K+ L +W ++R+ I
Sbjct: 477 NRPPIKLPFRKVENCNQVLKIGKELKFSLVNIAGNDIVQGNKKLILAFLWQ-LMRYNILQ 535
Query: 569 I--------SVEEMTAKEGLLLWCQRKTAPY-KNVNVXNF-HLSFKDGLAFCALIHRHRP 718
+ + +E+T + +L+W +K K+ + +F S G+ F L+ P
Sbjct: 536 LLKNLRFHSNGKEITDND-ILIWANKKVKDSGKHSRMESFKDRSLSSGIFFLNLLGAVEP 594
Query: 719 XLIDYSKLSK 748
++++S ++K
Sbjct: 595 RVVNWSLVTK 604
>02_04_0414 -
22685981-22686178,22686374-22686465,22686580-22686676,
22686801-22686916,22687314-22687513,22687588-22687740,
22687960-22688171,22688403-22688519,22688613-22688687,
22688815-22688853,22689518-22689689,22689809-22690056,
22690151-22690324,22690418-22690504
Length = 659
Score = 46.8 bits (106), Expect = 2e-05
Identities = 36/142 (25%), Positives = 63/142 (44%), Gaps = 10/142 (7%)
Frame = +2
Query: 248 QQKKTFTAWCNSHLRKAGTGIENIEDDFRNGLKLMLLLEVISGETLPKPDRGK----MRF 415
++++ F W NS T + N+ +D R G L+ +L+ IS + K M F
Sbjct: 398 REERAFRLWINS--LGIATYVNNLFEDVRTGWVLLEVLDKISPGIVNWKQASKPPIIMPF 455
Query: 416 HKIANVNKALDFIASKGVKLVSIGAEEIVDGNLKMTLGMIW----TIILRFA--IQDISV 577
K+ N N+ ++ +V+I +IV GN K+ L +W T IL+ ++ S
Sbjct: 456 RKVENGNQVIEIGKELKFSVVNISGNDIVQGNKKLILAFLWQLMRTSILQLLKNLRTHSK 515
Query: 578 EEMTAKEGLLLWCQRKTAPYKN 643
++ +L+W K N
Sbjct: 516 DKEITDADILIWANNKDKSIAN 537
>02_05_0540 +
29852109-29852195,29852304-29852477,29852585-29852841,
29852954-29853125,29853513-29853551,29853647-29853715,
29853795-29853911,29854190-29854401,29854578-29854736,
29854810-29855009,29855100-29855266,29855346-29855442,
29855560-29855651,29855861-29856139
Length = 706
Score = 46.0 bits (104), Expect = 3e-05
Identities = 42/184 (22%), Positives = 87/184 (47%), Gaps = 17/184 (9%)
Frame = +2
Query: 248 QQKKTFTAWCNSHLRKAGTGIENIEDDFRNGLKLMLLLEVISGETL-----PKPDRGKMR 412
+++++F W NS + + N+ +D R+G L+ +L+ +S ++ KP K+
Sbjct: 401 REERSFRMWINS--LGVDSYVNNVFEDVRHGWVLLEVLDKVSPGSVNWKLASKPPI-KLP 457
Query: 413 FHKIANVNKALDFIASKGVKLVSIGAEEIVDGNLKMTLGMIWTII----------LRFAI 562
F K+ N N+ + LV++ +IV GN K+ + ++W ++ LR
Sbjct: 458 FRKLENCNQVVKIGKELKFSLVNLAGNDIVQGNKKLIVALLWQLMRFNMLQLLNRLRSHS 517
Query: 563 QDISVEEMTAKEGLLLWCQRKT-APYKNVNVXNF-HLSFKDGLAFCALIHRHRPXLIDYS 736
Q +E+T + +L W K A + + +F S +G F L+ +P ++++
Sbjct: 518 QGSQGKEITDAD-ILKWANSKVKASGRTSQMESFKDKSLSNGRFFLELLSAVQPRVVNWK 576
Query: 737 KLSK 748
++K
Sbjct: 577 VVTK 580
Score = 31.1 bits (67), Expect = 1.00
Identities = 16/57 (28%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
Frame = +2
Query: 227 LDPAWEKQQKKTFTAWCNSHLRKAG--TGIENIEDDFRNGLKLMLLLEVISGETLPK 391
+D +K W N HL+KAG + N D ++G LL+ ++ E P+
Sbjct: 268 IDEVLSLSPEKMLLRWMNHHLKKAGYKKTVSNFSTDVKDGEAYAYLLKALAPEHSPE 324
Score = 30.7 bits (66), Expect = 1.3
Identities = 40/170 (23%), Positives = 72/170 (42%), Gaps = 25/170 (14%)
Frame = +2
Query: 323 DDFRNGLKLMLLLEVISGETLPKPDRGKMR----FHKIANVNKALDFIASKGVKLVSIGA 490
D R+G+ L L+ + T+ + K R + + N L+ + G +V+IG
Sbjct: 164 DLVRDGVLLCKLINLAVPGTIDERAINKKRVLNPWERNENHTLCLNSAKAIGCTVVNIGT 223
Query: 491 EEIVDGNLKMTLGMIWTIILRFAIQDISVEE-------------------MTAKEGLLLW 613
+++V+G + LG+I II + D+++++ ++ ++ LL W
Sbjct: 224 QDLVEGRPHLILGLISQIIKIQLLADLNLKKTPQLVELFDDSKDIDEVLSLSPEKMLLRW 283
Query: 614 CQR--KTAPYKNVNVXNFHLSFKDGLAFCALIHRHRPXLIDYSKLSKDNP 757
K A YK V NF KDG A+ L+ P + L +P
Sbjct: 284 MNHHLKKAGYKK-TVSNFSTDVKDGEAYAYLLKALAPEHSPETTLETKDP 332
>12_02_1070 - 25814741-25815850
Length = 369
Score = 33.9 bits (74), Expect = 0.14
Identities = 19/47 (40%), Positives = 23/47 (48%)
Frame = -3
Query: 242 PRPGLGDPHAPTPPLVPCNRPGTTRHSCLSPRCPSSWSPH*PSIRCS 102
P P L P P VP + P TT+H L+P PS+ P IR S
Sbjct: 187 PEPSLSLPLLREPVSVPADEPDTTKHDKLTPPSPSTQQLP-PKIRLS 232
>01_06_0619 - 30650665-30651138
Length = 157
Score = 33.9 bits (74), Expect = 0.14
Identities = 21/62 (33%), Positives = 26/62 (41%)
Frame = -3
Query: 248 VSPRPGLGDPHAPTPPLVPCNRPGTTRHSCLSPRCPSSWSPH*PSIRCSFEPMTANSRVL 69
V P P GD + P PGT + + R +S PH PS EP A +R L
Sbjct: 26 VEPHPSGGDVQIGSREATPTVNPGTVKRRAMRSRASASVGPHKPSAPPQREPRRA-ARSL 84
Query: 68 IR 63
R
Sbjct: 85 AR 86
>03_02_0234 + 6625417-6626184,6626314-6626339,6626435-6626531,
6627009-6627116,6627194-6627328,6627429-6627528,
6627763-6627974,6628060-6628125,6628231-6628464,
6628583-6628641,6628716-6628782,6628863-6629192,
6629267-6629335,6629417-6629503,6629605-6629692,
6630057-6630178,6630251-6630355,6630442-6630485,
6630558-6630627,6630711-6630814,6630980-6631189,
6632935-6633018,6633291-6634003,6634115-6634649,
6634703-6634789,6634826-6634970,6635049-6635125,
6635215-6635359,6635462-6635626,6635725-6635958
Length = 1761
Score = 31.5 bits (68), Expect = 0.75
Identities = 16/40 (40%), Positives = 18/40 (45%)
Frame = -3
Query: 245 SPRPGLGDPHAPTPPLVPCNRPGTTRHSCLSPRCPSSWSP 126
SP PG P A PP P P + S SP PS +P
Sbjct: 1149 SPPPGSSPPPASPPPSTPSAPPTNSSGSAPSPPSPSQSAP 1188
>10_01_0112 -
1386762-1386953,1387228-1387309,1387399-1387509,
1387590-1387841,1387927-1388348,1388430-1390160,
1390251-1390448
Length = 995
Score = 29.9 bits (64), Expect = 2.3
Identities = 24/66 (36%), Positives = 30/66 (45%), Gaps = 4/66 (6%)
Frame = -3
Query: 245 SPRPGLGDPHAPTPPLVPCNRP--GTTRHSCLSPRCPSSW--SPH*PSIRCSFEPMTANS 78
SP P P PTPP P +P T + SP P+ P PS++ S P T S
Sbjct: 584 SPPPLRSPPRQPTPPPSPSQQPPLPTPQPVQASPTSPTKQHAPPAPPSVQTS--PPTPQS 641
Query: 77 RVLIRT 60
+LI T
Sbjct: 642 ALLIST 647
>05_02_0139 + 7041030-7041188,7041451-7042215,7044133-7044519
Length = 436
Score = 29.9 bits (64), Expect = 2.3
Identities = 13/29 (44%), Positives = 16/29 (55%), Gaps = 3/29 (10%)
Frame = -3
Query: 221 PHAPTPPLVPCNRPGT---TRHSCLSPRC 144
P +P PP P + P T + H CLSP C
Sbjct: 355 PSSPVPPRAPTSFPATIFPSPHMCLSPGC 383
>04_04_1093 +
30825722-30826168,30826457-30826608,30826926-30827048,
30827240-30827384,30828032-30828093,30828373-30828586,
30829671-30830585,30830827-30831076,30831164-30831432
Length = 858
Score = 29.9 bits (64), Expect = 2.3
Identities = 20/63 (31%), Positives = 28/63 (44%)
Frame = -3
Query: 215 APTPPLVPCNRPGTTRHSCLSPRCPSSWSPH*PSIRCSFEPMTANSRVLIRTAHCNRQPA 36
AP PP P + P RHS + P S H PS + P ++S +A + +P
Sbjct: 6 APPPPSSPPSSPPPLRHSPAALGTPRSRRRHSPSPSLALTP--SSSASASASASTSSRPK 63
Query: 35 ARP 27
RP
Sbjct: 64 VRP 66
>10_08_1005 -
22179407-22180122,22180210-22180653,22180737-22180861,
22180939-22181169,22181250-22181805,22181896-22182312,
22182405-22183216,22183653-22183738,22184464-22184534,
22184553-22185573,22186018-22186062,22186252-22186326,
22186797-22186871
Length = 1557
Score = 29.1 bits (62), Expect = 4.0
Identities = 21/69 (30%), Positives = 30/69 (43%), Gaps = 1/69 (1%)
Frame = -1
Query: 700 EGTEGQTVLERQVE-VXDIDILVRRCLTLTPEQQTFLCGHFFN*DVLDGEAENNGPNHTK 524
EG E + ++E V D + L C E QT G VLDG+ +N+ +
Sbjct: 453 EGAEHTYCMRVKLEKVPDGEWLCEECCLKEDENQTRSNGGTSRNKVLDGKNQNSESTNNS 512
Query: 523 SHLKVTIDD 497
LKV + D
Sbjct: 513 KTLKVVVTD 521
>03_05_1070 + 30125131-30127029
Length = 632
Score = 28.7 bits (61), Expect = 5.3
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = -2
Query: 132 VTALTVDSMFVRAYDRELACVDSYRALQQAAGRSPAA 22
V L +DSM R D E C RA+++ GRS AA
Sbjct: 540 VLRLDMDSMRNRVQDLERECSSMRRAIKKIDGRSAAA 576
>07_01_0974 + 8211602-8212051
Length = 149
Score = 28.3 bits (60), Expect = 7.0
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = -3
Query: 233 GLGDPHAPTPPLVPCNRPGTTRHSCLSP 150
G P P PP VPCN TT + SP
Sbjct: 65 GPSPPTNPAPPAVPCNCGTTTAPAAPSP 92
>05_06_0152 -
26008495-26009074,26010555-26011361,26016536-26016657,
26016860-26017462
Length = 703
Score = 28.3 bits (60), Expect = 7.0
Identities = 17/39 (43%), Positives = 18/39 (46%)
Frame = -3
Query: 242 PRPGLGDPHAPTPPLVPCNRPGTTRHSCLSPRCPSSWSP 126
P P L P APT P P RH SPR PS+ P
Sbjct: 533 PEPKLCRPAAPTLPF-----PALLRHLPCSPRSPSAQPP 566
>02_01_0148 -
1051121-1051192,1051378-1051512,1052343-1052396,
1052501-1052581,1052667-1052826,1053346-1053453,
1053543-1053718,1053952-1054002,1054154-1054264,
1054493-1054547,1055667-1055789,1055922-1056007,
1056235-1056349,1056429-1056667
Length = 521
Score = 28.3 bits (60), Expect = 7.0
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = +1
Query: 220 GSPRPGLGETTEKDIHSMVQQSPQKSWHRHREHR 321
G + GL T KD H + + QK WHR R
Sbjct: 449 GVVQKGLRPTIPKDTHPKLSELLQKCWHRDPAER 482
>12_02_0126 + 13958247-13958298,13958422-13958972,13959076-13960047
Length = 524
Score = 27.9 bits (59), Expect = 9.3
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +2
Query: 401 GKMRFHKIANVNKALDFIASK 463
G MR HKI +V KAL F+ K
Sbjct: 71 GSMRGHKIESVKKALQFVIMK 91
>05_04_0272 +
19624898-19625071,19625909-19626370,19626471-19626905,
19626992-19627237,19627318-19628085,19628245-19628417,
19629337-19629440,19629525-19630127,19630210-19630214
Length = 989
Score = 27.9 bits (59), Expect = 9.3
Identities = 23/72 (31%), Positives = 34/72 (47%), Gaps = 5/72 (6%)
Frame = +2
Query: 281 SHLRKAGTGIENIEDDFR-----NGLKLMLLLEVISGETLPKPDRGKMRFHKIANVNKAL 445
+H KAG I D R NGL+ LLLE I+ + P ++ K+AN AL
Sbjct: 773 AHGSKAGFPISGFYSDMRKMQNMNGLEGQLLLEPITNDLQPMEKCNSVQSPKVANFT-AL 831
Query: 446 DFIASKGVKLVS 481
+ ++ + VS
Sbjct: 832 HNVDNESMNHVS 843
>05_04_0139 +
18355597-18355696,18356665-18356778,18357118-18357263,
18357365-18357910,18358397-18358600
Length = 369
Score = 27.9 bits (59), Expect = 9.3
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = -1
Query: 457 GDEVECLVDVSDFVESHFATVGLGQSLAGDDL 362
G V+ + +++ E H A VG GQ+L GDD+
Sbjct: 212 GGGVDGELAIAEAAELHDAVVGRGQALHGDDV 243
>02_02_0009 +
6068260-6068591,6068797-6068917,6069034-6069122,
6069207-6069291,6069421-6069580,6069667-6069743,
6069848-6069898,6069979-6070069,6070167-6070468,
6070549-6070830,6070911-6071388,6071457-6071560,
6071647-6071809,6071895-6072017,6072099-6072217,
6072304-6072636,6072713-6073003,6073088-6073171,
6073260-6073393,6073478-6073705,6073795-6073966,
6074062-6074316,6074408-6074668
Length = 1444
Score = 27.9 bits (59), Expect = 9.3
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = +2
Query: 551 RFAIQDISVEEMTAKEGLLLWCQRKTAPYKNVNVXNFHLSFKD 679
R + D E + K+ WC R+ PY+ ++V +F +FK+
Sbjct: 427 RKGVADFLQEVTSRKDQHQYWC-RRDEPYRYISVNDFSEAFKE 468
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,849,984
Number of Sequences: 37544
Number of extensions: 464174
Number of successful extensions: 1735
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1630
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1733
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2027850416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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