Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_F_P14
         (776 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    29   0.042
AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    24   1.2  
EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    23   3.6  
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    23   3.6  
AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    21   8.3  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 29.1 bits (62), Expect = 0.042
 Identities = 13/50 (26%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
 Frame = -2

Query: 685 LWIFLVSFGRFQA-VITLVFKFFFNFSHMRPCCVWIRFCKEYDYLICFLF 539
           ++ F  +F  F   ++ LV  ++F + H+  CC +I F     +L+C  +
Sbjct: 238 IYYFYYAFILFTVHLLLLVCIYYFYYMHLLFCCAFIIFTMHLLFLLCIYY 287


>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 9/35 (25%), Positives = 17/35 (48%)
 Frame = -2

Query: 691 GILWIFLVSFGRFQAVITLVFKFFFNFSHMRPCCV 587
           G +W  ++ FG F+  +    + +F F +    CV
Sbjct: 130 GYVWTDILGFGYFREYLAEAVQLYFQFYYTYFLCV 164


>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = +2

Query: 554 KVVIFLAKSNPNTTW 598
           ++V+F  +S+PN TW
Sbjct: 186 QMVVFHVESHPNITW 200


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = +2

Query: 554 KVVIFLAKSNPNTTW 598
           ++V+F  +S+PN TW
Sbjct: 186 QMVVFHVESHPNITW 200


>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 16/78 (20%), Positives = 33/78 (42%), Gaps = 4/78 (5%)
 Frame = +2

Query: 365 FVKVFVELKNVHTLPKEQVYCKLTDKSMELHVDNLENKDYLLV----INKLLEPINVADS 532
           F K   +++ VH +  +     L     +L + N   + +L++    +N +        S
Sbjct: 22  FTKKLEQMRQVHEVDNQ-----LKQMGCDLDIPNSVVQKHLILLMVLVNLIFNTCGEVFS 76

Query: 533 HWKQKTDKVVIFLAKSNP 586
            W +  D+++IFL    P
Sbjct: 77  AWVRCQDQILIFLVNWYP 94


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 178,916
Number of Sequences: 336
Number of extensions: 4062
Number of successful extensions: 16
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20961338
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)