Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P05_F_P14
(776 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z22176-11|CAA80141.1| 784|Caenorhabditis elegans Hypothetical p... 35 0.056
AC025723-8|AAK29942.1| 1273|Caenorhabditis elegans C.elegans hom... 32 0.40
AC025723-7|AAN84833.1| 619|Caenorhabditis elegans C.elegans hom... 32 0.40
AC025723-6|AAN84834.1| 621|Caenorhabditis elegans C.elegans hom... 32 0.40
Z49126-2|CAA88939.2| 411|Caenorhabditis elegans Hypothetical pr... 30 1.6
U00048-7|AAB53831.2| 752|Caenorhabditis elegans Hypothetical pr... 30 2.1
AC024770-5|AAK84605.2| 684|Caenorhabditis elegans Hypothetical ... 29 2.8
AL033514-32|CAA22112.1| 344|Caenorhabditis elegans Hypothetical... 29 4.9
U41037-1|AAA82387.1| 629|Caenorhabditis elegans Gtpase activati... 28 6.5
AF118123-1|AAD13781.1| 629|Caenorhabditis elegans GTPase activa... 28 6.5
Z74036-3|CAA98488.1| 517|Caenorhabditis elegans Hypothetical pr... 28 8.6
Z70267-1|CAA94211.1| 307|Caenorhabditis elegans Hypothetical pr... 28 8.6
Z69903-7|CAA93776.1| 1607|Caenorhabditis elegans Hypothetical pr... 28 8.6
Z69660-1|CAA93489.1| 1607|Caenorhabditis elegans Hypothetical pr... 28 8.6
Z68161-9|CAA92298.2| 688|Caenorhabditis elegans Hypothetical pr... 28 8.6
AL032630-2|CAA21559.1| 217|Caenorhabditis elegans Hypothetical ... 28 8.6
>Z22176-11|CAA80141.1| 784|Caenorhabditis elegans Hypothetical
protein ZK1098.3 protein.
Length = 784
Score = 35.1 bits (77), Expect = 0.056
Identities = 23/84 (27%), Positives = 42/84 (50%), Gaps = 3/84 (3%)
Frame = +2
Query: 287 TTSTSAPVQKKYQVKLNVYGWDQSDKFVKVFVELKNVHTLPKEQVYCK---LTDKSMELH 457
T+S P K+ +K + D K K V+ K+ ++ +EQ+Y K D+ ++
Sbjct: 5 TSSEDVPENKQKSLKFEII--DARMKIFKDIVKSKSSESVKEEQIYQKSLEFFDEDLKSS 62
Query: 458 VDNLENKDYLLVINKLLEPINVAD 529
+++ N++ K LEP+NV D
Sbjct: 63 EESVSNEEIKTGSEKELEPLNVFD 86
>AC025723-8|AAK29942.1| 1273|Caenorhabditis elegans C.elegans
homeobox protein 44,isoform a protein.
Length = 1273
Score = 32.3 bits (70), Expect = 0.40
Identities = 26/107 (24%), Positives = 50/107 (46%), Gaps = 2/107 (1%)
Frame = +2
Query: 437 DKSMELHVDNLENKDYLLVINKLLEPINVADSHWKQKTDKVVIFLAKSNPNTTWSHMTEI 616
+K+ + + E K L+ +N LE + D ++ DK+ L + + E+
Sbjct: 113 EKTQKAVEEREELKRQLIKVNNELEDLRGKDVKVRKLKDKLAK-LESEQDIFIENAVNEV 171
Query: 617 EKKFEDQRNNRLKP--AETDKKDPQDSIMSLMKNMYETGDDEMXRMI 751
EKK E + N+RL AE +K Q+ I+ + E+ + ++ R +
Sbjct: 172 EKKAEQELNDRLTELIAEKEKMKEQNEILEKNMDSLESKNKDIQRKL 218
>AC025723-7|AAN84833.1| 619|Caenorhabditis elegans C.elegans
homeobox protein 44,isoform b protein.
Length = 619
Score = 32.3 bits (70), Expect = 0.40
Identities = 26/107 (24%), Positives = 50/107 (46%), Gaps = 2/107 (1%)
Frame = +2
Query: 437 DKSMELHVDNLENKDYLLVINKLLEPINVADSHWKQKTDKVVIFLAKSNPNTTWSHMTEI 616
+K+ + + E K L+ +N LE + D ++ DK+ L + + E+
Sbjct: 113 EKTQKAVEEREELKRQLIKVNNELEDLRGKDVKVRKLKDKLAK-LESEQDIFIENAVNEV 171
Query: 617 EKKFEDQRNNRLKP--AETDKKDPQDSIMSLMKNMYETGDDEMXRMI 751
EKK E + N+RL AE +K Q+ I+ + E+ + ++ R +
Sbjct: 172 EKKAEQELNDRLTELIAEKEKMKEQNEILEKNMDSLESKNKDIQRKL 218
>AC025723-6|AAN84834.1| 621|Caenorhabditis elegans C.elegans
homeobox protein 44,isoform c protein.
Length = 621
Score = 32.3 bits (70), Expect = 0.40
Identities = 26/107 (24%), Positives = 50/107 (46%), Gaps = 2/107 (1%)
Frame = +2
Query: 437 DKSMELHVDNLENKDYLLVINKLLEPINVADSHWKQKTDKVVIFLAKSNPNTTWSHMTEI 616
+K+ + + E K L+ +N LE + D ++ DK+ L + + E+
Sbjct: 113 EKTQKAVEEREELKRQLIKVNNELEDLRGKDVKVRKLKDKLAK-LESEQDIFIENAVNEV 171
Query: 617 EKKFEDQRNNRLKP--AETDKKDPQDSIMSLMKNMYETGDDEMXRMI 751
EKK E + N+RL AE +K Q+ I+ + E+ + ++ R +
Sbjct: 172 EKKAEQELNDRLTELIAEKEKMKEQNEILEKNMDSLESKNKDIQRKL 218
>Z49126-2|CAA88939.2| 411|Caenorhabditis elegans Hypothetical
protein DH11.2 protein.
Length = 411
Score = 30.3 bits (65), Expect = 1.6
Identities = 19/63 (30%), Positives = 26/63 (41%)
Frame = +2
Query: 269 EVSPIPTTSTSAPVQKKYQVKLNVYGWDQSDKFVKVFVELKNVHTLPKEQVYCKLTDKSM 448
++ +P V K +L YGWDQ + FV TL + YC L D
Sbjct: 21 DLPQLPDEIIEIIVSKVLPTELVAYGWDQVSRSFGTFVH----RTLCSKVYYCALHDPVW 76
Query: 449 ELH 457
EL+
Sbjct: 77 ELY 79
>U00048-7|AAB53831.2| 752|Caenorhabditis elegans Hypothetical
protein C05D11.9 protein.
Length = 752
Score = 29.9 bits (64), Expect = 2.1
Identities = 19/72 (26%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Frame = +2
Query: 515 INVADSHWKQKTDKVVIFLAKSNPNTTWSHMTEIEKK--FEDQRNNRLKPAETDKKDPQD 688
++V+DS ++ D VI L +P TTW T ++ K ++ N R++ ++ K+ ++
Sbjct: 297 LSVSDSVFQSSRDGEVINLLIEDPRTTWDRKTVLKHKKVNKEADNERIRVSKFWNKEFRE 356
Query: 689 SIMSLMKNMYET 724
M++ K M ++
Sbjct: 357 --MAIEKRMADS 366
>AC024770-5|AAK84605.2| 684|Caenorhabditis elegans Hypothetical
protein Y39H10A.6 protein.
Length = 684
Score = 29.5 bits (63), Expect = 2.8
Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +1
Query: 181 ESTGFTLLGDQKT*DRTNNIKRKGNFDANGSITNTHNKYIS-SSAKEVSSQIECIWL 348
E TGFT+ R N +K GN+DA I T N +I+ +AK S ++C L
Sbjct: 79 EETGFTIETTSGARVRANILK--GNYDAAIQILETSNDHITEETAKHGSYIVKCFKL 133
>AL033514-32|CAA22112.1| 344|Caenorhabditis elegans Hypothetical
protein Y75B8A.34 protein.
Length = 344
Score = 28.7 bits (61), Expect = 4.9
Identities = 21/56 (37%), Positives = 32/56 (57%), Gaps = 8/56 (14%)
Frame = -3
Query: 750 IILFISSSPVSYIFFMRLIMESCGSFLSVS---AGFKRL-----LRWSSNFFSISV 607
IILFI SS +S F+ +I +F+ S +GF + L +SSNFFS+++
Sbjct: 82 IILFIHSSIISLRVFVYIISSLASAFIIDSRTLSGFYFIQPSLYLDYSSNFFSVAI 137
>U41037-1|AAA82387.1| 629|Caenorhabditis elegans Gtpase activating
protein familyprotein 1 protein.
Length = 629
Score = 28.3 bits (60), Expect = 6.5
Identities = 15/65 (23%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Frame = +2
Query: 323 QVKLNVYGWDQSDKFVKVFVELKNVHTLPKEQVYC--KLTDKSMELHVDNLENKDYLLVI 496
QV + W + + K +V+L N H + ++ V C K T ++ N++NK+ + ++
Sbjct: 420 QVDRSRLAWKKVLHYKKRYVQLTNTHLIWQKDVQCAPKGTVPLSDIKFVNVDNKNIITIV 479
Query: 497 NKLLE 511
+ ++
Sbjct: 480 CETMQ 484
>AF118123-1|AAD13781.1| 629|Caenorhabditis elegans GTPase
activating protein GAP-1 protein.
Length = 629
Score = 28.3 bits (60), Expect = 6.5
Identities = 15/65 (23%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Frame = +2
Query: 323 QVKLNVYGWDQSDKFVKVFVELKNVHTLPKEQVYC--KLTDKSMELHVDNLENKDYLLVI 496
QV + W + + K +V+L N H + ++ V C K T ++ N++NK+ + ++
Sbjct: 420 QVDRSRLAWKKVLHYKKRYVQLTNTHLIWQKDVQCAPKGTVPLSDIKFVNVDNKNIITIV 479
Query: 497 NKLLE 511
+ ++
Sbjct: 480 CETMQ 484
>Z74036-3|CAA98488.1| 517|Caenorhabditis elegans Hypothetical
protein F55C10.4 protein.
Length = 517
Score = 27.9 bits (59), Expect = 8.6
Identities = 16/53 (30%), Positives = 25/53 (47%)
Frame = +2
Query: 566 FLAKSNPNTTWSHMTEIEKKFEDQRNNRLKPAETDKKDPQDSIMSLMKNMYET 724
F+ N+TWSH + +K + KP + K ++ M +KNMY T
Sbjct: 332 FVRPERFNSTWSHWSRAAQKKPIYLDGYEKPILRELKTISNNGMFHLKNMYLT 384
>Z70267-1|CAA94211.1| 307|Caenorhabditis elegans Hypothetical
protein K04C1.1 protein.
Length = 307
Score = 27.9 bits (59), Expect = 8.6
Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 5/68 (7%)
Frame = -3
Query: 738 ISSSPVSYIFFMRLIMESCGSFLSVSAGFKRL-----LRWSSNFFSISVI*DHVVFGLDF 574
+ S P + +F+M L M SFL+V + FK + L+ SS FF V D + + F
Sbjct: 197 LRSVPDTNLFYMSLAMFGIDSFLAVLSTFKAIIFLLELKNSSEFFERLV--DWIDLLVPF 254
Query: 573 ARNMTTLS 550
A + TL+
Sbjct: 255 ASDALTLT 262
>Z69903-7|CAA93776.1| 1607|Caenorhabditis elegans Hypothetical
protein F39B1.1 protein.
Length = 1607
Score = 27.9 bits (59), Expect = 8.6
Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = -1
Query: 473 FPDCPHAAPLIYLSIYNIPVPLVVYEHSLVQQI-P*QIYPTGP 348
FP P + PL++ + P P V HS VQQ P I+PT P
Sbjct: 126 FPPAP-SVPLLHDRYFVPPPPPVPPRHSRVQQSPPVPIHPTPP 167
>Z69660-1|CAA93489.1| 1607|Caenorhabditis elegans Hypothetical
protein F39B1.1 protein.
Length = 1607
Score = 27.9 bits (59), Expect = 8.6
Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = -1
Query: 473 FPDCPHAAPLIYLSIYNIPVPLVVYEHSLVQQI-P*QIYPTGP 348
FP P + PL++ + P P V HS VQQ P I+PT P
Sbjct: 126 FPPAP-SVPLLHDRYFVPPPPPVPPRHSRVQQSPPVPIHPTPP 167
>Z68161-9|CAA92298.2| 688|Caenorhabditis elegans Hypothetical
protein F20C5.5 protein.
Length = 688
Score = 27.9 bits (59), Expect = 8.6
Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = +2
Query: 458 VDNLENKD-YLLVINKLLEPINVADSHWKQKTDKVVIFLAKSNPNTTWSHMTEIEKKFED 634
V +LENKD YLLV + + N+ S K+K +++ + N S +EK E
Sbjct: 279 VTSLENKDDYLLVTVEFQKRKNILFSELKKKNEEIKMLQESFNVYQKDSIEKVMEKFLEL 338
Query: 635 QRNN 646
Q N
Sbjct: 339 QHQN 342
>AL032630-2|CAA21559.1| 217|Caenorhabditis elegans Hypothetical
protein Y62H9A.2 protein.
Length = 217
Score = 27.9 bits (59), Expect = 8.6
Identities = 16/59 (27%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Frame = +2
Query: 602 HMTEIEKKFEDQRNNRLKPAETDKKDPQDSIMSLMKNMYET-GDDEMXRMISRLGMKDS 775
H T+I + +++ LK ETD D Q S M ET + E +++ + +S
Sbjct: 155 HKTKILENMLEEKEKELKTRETDAHDLQKSFQFSFTEMAETSANSECGTKVTKCAVANS 213
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,918,980
Number of Sequences: 27780
Number of extensions: 348392
Number of successful extensions: 1373
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1294
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1370
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1872168044
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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