Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_F_P08
         (503 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    25   0.29 
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    25   0.29 
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    25   0.29 
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    21   6.3  
AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    21   6.3  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    21   6.3  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    21   6.3  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    21   8.3  

>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 25.4 bits (53), Expect = 0.29
 Identities = 10/37 (27%), Positives = 20/37 (54%)
 Frame = -2

Query: 211 FQDFLKETTCCSLLRFIRVIK*RYAVLKFFIYQFIEP 101
           +++F+ ET+    +R +   K  +    +FIY F+ P
Sbjct: 25  WENFVSETSYLPFIRALGKSKKEFKTRTYFIYAFVAP 61


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 25.4 bits (53), Expect = 0.29
 Identities = 10/37 (27%), Positives = 20/37 (54%)
 Frame = -2

Query: 211 FQDFLKETTCCSLLRFIRVIK*RYAVLKFFIYQFIEP 101
           +++F+ ET+    +R +   K  +    +FIY F+ P
Sbjct: 258 WENFVSETSYLPFIRALGKSKKEFKTRTYFIYAFVAP 294


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 25.4 bits (53), Expect = 0.29
 Identities = 10/37 (27%), Positives = 20/37 (54%)
 Frame = -2

Query: 211 FQDFLKETTCCSLLRFIRVIK*RYAVLKFFIYQFIEP 101
           +++F+ ET+    +R +   K  +    +FIY F+ P
Sbjct: 258 WENFVSETSYLPFIRALGKSKKEFKTRTYFIYAFVAP 294


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 21.0 bits (42), Expect = 6.3
 Identities = 10/32 (31%), Positives = 17/32 (53%)
 Frame = -1

Query: 245 CLTFSMNISS*VSRFSKGDDMLFFIEIYTSYK 150
           CL +   +   +S+  K D+ L  + I+ SYK
Sbjct: 97  CLFYQNKLIEVISKLHKLDNKLKHMLIWKSYK 128


>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 21.0 bits (42), Expect = 6.3
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +3

Query: 135 TAYRYFITRINLN 173
           TAY + IT IN+N
Sbjct: 160 TAYLHIITMINMN 172


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 21.0 bits (42), Expect = 6.3
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +3

Query: 135 TAYRYFITRINLN 173
           TAY + IT IN+N
Sbjct: 160 TAYLHIITMINMN 172


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 21.0 bits (42), Expect = 6.3
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +3

Query: 135 TAYRYFITRINLN 173
           TAY + IT IN+N
Sbjct: 160 TAYLHIITMINMN 172


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 20.6 bits (41), Expect = 8.3
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -1

Query: 185 MLFFIEIYTSYKIAVRRSKILY 120
           +LFFI +Y      +  SK+LY
Sbjct: 18  ILFFIYLYWQQTSNLTTSKLLY 39


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,671
Number of Sequences: 336
Number of extensions: 1455
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11944578
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)