Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P05_F_P03
(507 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY029256-1|AAK32965.1| 77|Drosophila melanogaster cytochrome c... 77 2e-14
AE014134-909|AAF52241.3| 77|Drosophila melanogaster CG14028-PA... 77 2e-14
AY070808-1|AAL48430.1| 87|Drosophila melanogaster AT20031p pro... 46 3e-05
AE014134-976|AAN10559.1| 87|Drosophila melanogaster CG31644-PA... 46 3e-05
AY102660-1|AAM27489.1| 818|Drosophila melanogaster GH10652p pro... 28 6.3
AY069298-1|AAL39443.1| 157|Drosophila melanogaster HL01868p pro... 28 6.3
AE014296-1164|AAN12065.1| 157|Drosophila melanogaster CG10077-P... 28 6.3
AE014296-1163|AAF50635.2| 818|Drosophila melanogaster CG10077-P... 28 6.3
Y12322-1|CAA72991.1| 1191|Drosophila melanogaster u-shaped protein. 28 8.3
BT015278-1|AAT94507.1| 1191|Drosophila melanogaster LD12631p pro... 28 8.3
AE014134-116|AAF51488.2| 1191|Drosophila melanogaster CG2762-PA ... 28 8.3
>AY029256-1|AAK32965.1| 77|Drosophila melanogaster cytochrome c
oxidase subunit VIc protein.
Length = 77
Score = 76.6 bits (180), Expect = 2e-14
Identities = 37/78 (47%), Positives = 49/78 (62%)
Frame = +2
Query: 182 MAGESAVSTASKPQMRGLLNAVIKRNIIVALALSGVAGFTFKQIIGNERKRKYAEFYRTY 361
MA A S+A P +RGL NA IKRN+ V+L L+ V +K ++ + +K YA+FY Y
Sbjct: 1 MANTPATSSAG-PVLRGLHNATIKRNLAVSLGLTAVVTIAYKILVNDPKKAAYADFYSKY 59
Query: 362 DAEKEFEEMRKKGLFQSC 415
DA K FE M+ G FQSC
Sbjct: 60 DANKSFERMKAAGRFQSC 77
>AE014134-909|AAF52241.3| 77|Drosophila melanogaster CG14028-PA
protein.
Length = 77
Score = 76.6 bits (180), Expect = 2e-14
Identities = 37/78 (47%), Positives = 49/78 (62%)
Frame = +2
Query: 182 MAGESAVSTASKPQMRGLLNAVIKRNIIVALALSGVAGFTFKQIIGNERKRKYAEFYRTY 361
MA A S+A P +RGL NA IKRN+ V+L L+ V +K ++ + +K YA+FY Y
Sbjct: 1 MANTPATSSAG-PVLRGLHNATIKRNLAVSLGLTAVVTIAYKILVNDPKKAAYADFYSKY 59
Query: 362 DAEKEFEEMRKKGLFQSC 415
DA K FE M+ G FQSC
Sbjct: 60 DANKSFERMKAAGRFQSC 77
>AY070808-1|AAL48430.1| 87|Drosophila melanogaster AT20031p
protein.
Length = 87
Score = 46.0 bits (104), Expect = 3e-05
Identities = 22/54 (40%), Positives = 28/54 (51%)
Frame = +2
Query: 254 RNIIVALALSGVAGFTFKQIIGNERKRKYAEFYRTYDAEKEFEEMRKKGLFQSC 415
RN+ +A L+ +A F + N RKRKY FY TYD F+ M G SC
Sbjct: 20 RNVKMACTLALLAPLLFYTLHNNPRKRKYRNFYSTYDPMDAFDRMMSGGYLSSC 73
>AE014134-976|AAN10559.1| 87|Drosophila melanogaster CG31644-PA
protein.
Length = 87
Score = 46.0 bits (104), Expect = 3e-05
Identities = 22/54 (40%), Positives = 28/54 (51%)
Frame = +2
Query: 254 RNIIVALALSGVAGFTFKQIIGNERKRKYAEFYRTYDAEKEFEEMRKKGLFQSC 415
RN+ +A L+ +A F + N RKRKY FY TYD F+ M G SC
Sbjct: 20 RNVKMACTLALLAPLLFYTLHNNPRKRKYRNFYSTYDPMDAFDRMMSGGYLSSC 73
>AY102660-1|AAM27489.1| 818|Drosophila melanogaster GH10652p
protein.
Length = 818
Score = 28.3 bits (60), Expect = 6.3
Identities = 9/27 (33%), Positives = 16/27 (59%)
Frame = +1
Query: 151 IXNFSKNIIRHGWRKCSIDSEQASDAR 231
+ ++NI R GWR C+I +++ R
Sbjct: 417 VDEITRNISRQGWRACAIHGDKSQQER 443
>AY069298-1|AAL39443.1| 157|Drosophila melanogaster HL01868p
protein.
Length = 157
Score = 28.3 bits (60), Expect = 6.3
Identities = 9/27 (33%), Positives = 16/27 (59%)
Frame = +1
Query: 151 IXNFSKNIIRHGWRKCSIDSEQASDAR 231
+ ++NI R GWR C+I +++ R
Sbjct: 102 VDEITRNISRQGWRACAIHGDKSQQER 128
>AE014296-1164|AAN12065.1| 157|Drosophila melanogaster CG10077-PB,
isoform B protein.
Length = 157
Score = 28.3 bits (60), Expect = 6.3
Identities = 9/27 (33%), Positives = 16/27 (59%)
Frame = +1
Query: 151 IXNFSKNIIRHGWRKCSIDSEQASDAR 231
+ ++NI R GWR C+I +++ R
Sbjct: 102 VDEITRNISRQGWRACAIHGDKSQQER 128
>AE014296-1163|AAF50635.2| 818|Drosophila melanogaster CG10077-PA,
isoform A protein.
Length = 818
Score = 28.3 bits (60), Expect = 6.3
Identities = 9/27 (33%), Positives = 16/27 (59%)
Frame = +1
Query: 151 IXNFSKNIIRHGWRKCSIDSEQASDAR 231
+ ++NI R GWR C+I +++ R
Sbjct: 417 VDEITRNISRQGWRACAIHGDKSQQER 443
>Y12322-1|CAA72991.1| 1191|Drosophila melanogaster u-shaped protein.
Length = 1191
Score = 27.9 bits (59), Expect = 8.3
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = -3
Query: 313 DLLEGKTSDARESQSNNNVTFDDGIEE 233
D LE + +D+R+ Q+NNN DD E+
Sbjct: 42 DQLEDQLNDSRDPQNNNNNIDDDADED 68
>BT015278-1|AAT94507.1| 1191|Drosophila melanogaster LD12631p
protein.
Length = 1191
Score = 27.9 bits (59), Expect = 8.3
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = -3
Query: 313 DLLEGKTSDARESQSNNNVTFDDGIEE 233
D LE + +D+R+ Q+NNN DD E+
Sbjct: 42 DQLEDQLNDSRDPQNNNNNIDDDADED 68
>AE014134-116|AAF51488.2| 1191|Drosophila melanogaster CG2762-PA
protein.
Length = 1191
Score = 27.9 bits (59), Expect = 8.3
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = -3
Query: 313 DLLEGKTSDARESQSNNNVTFDDGIEE 233
D LE + +D+R+ Q+NNN DD E+
Sbjct: 42 DQLEDQLNDSRDPQNNNNNIDDDADED 68
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,735,186
Number of Sequences: 53049
Number of extensions: 305363
Number of successful extensions: 730
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 726
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 730
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1825511424
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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