Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_F_P02
         (380 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      23   0.78 
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      23   0.78 
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    23   1.4  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    23   1.4  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    21   3.1  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    21   3.1  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   4.2  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   4.2  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    21   5.5  

>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 23.4 bits (48), Expect = 0.78
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = -3

Query: 102 GESHGHQQSNEGEQFVEHVKSATCRFSL 19
           G+S  +Q  N GE+   H+K     F L
Sbjct: 461 GDSKNNQDGNNGEKKKPHIKKPLNAFML 488



 Score = 19.8 bits (39), Expect = 9.6
 Identities = 7/11 (63%), Positives = 7/11 (63%)
 Frame = +3

Query: 87  GRGFRQPQPQA 119
           G GFR P P A
Sbjct: 199 GAGFRSPYPSA 209


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 23.4 bits (48), Expect = 0.78
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = -3

Query: 102 GESHGHQQSNEGEQFVEHVKSATCRFSL 19
           G+S  +Q  N GE+   H+K     F L
Sbjct: 353 GDSKNNQDGNNGEKKKPHIKKPLNAFML 380



 Score = 19.8 bits (39), Expect = 9.6
 Identities = 7/11 (63%), Positives = 7/11 (63%)
 Frame = +3

Query: 87  GRGFRQPQPQA 119
           G GFR P P A
Sbjct: 91  GAGFRSPYPSA 101


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 22.6 bits (46), Expect = 1.4
 Identities = 11/21 (52%), Positives = 12/21 (57%)
 Frame = +1

Query: 43  FNMFYKLFTLIALLVAVAFAS 105
           FN+FY  F    LLV VA  S
Sbjct: 319 FNLFYLCFCFYWLLVMVAMFS 339


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 22.6 bits (46), Expect = 1.4
 Identities = 11/21 (52%), Positives = 12/21 (57%)
 Frame = +1

Query: 43  FNMFYKLFTLIALLVAVAFAS 105
           FN+FY  F    LLV VA  S
Sbjct: 275 FNLFYLCFCFYWLLVMVAMFS 295


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 21.4 bits (43), Expect = 3.1
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +1

Query: 82  LVAVAFASPNPKPEPVLT 135
           L  +A   P P+PEP +T
Sbjct: 168 LAIIACMGPPPQPEPPVT 185


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.4 bits (43), Expect = 3.1
 Identities = 7/20 (35%), Positives = 9/20 (45%)
 Frame = +2

Query: 5   RPMTCKENLQVALLTCSTNC 64
           RP  C  +L   +L C   C
Sbjct: 715 RPANCSPDLYAVMLNCWKEC 734


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 4.2
 Identities = 9/29 (31%), Positives = 13/29 (44%)
 Frame = +2

Query: 5   RPMTCKENLQVALLTCSTNCSPSLLCWWP 91
           +P +  ENL++ L   S     S    WP
Sbjct: 207 KPCSINENLKMGLDIASITAQASSFVVWP 235


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 4.2
 Identities = 9/29 (31%), Positives = 13/29 (44%)
 Frame = +2

Query: 5   RPMTCKENLQVALLTCSTNCSPSLLCWWP 91
           +P +  ENL++ L   S     S    WP
Sbjct: 207 KPCSINENLKMGLDIASITAQASSFVVWP 235


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 20.6 bits (41), Expect = 5.5
 Identities = 11/35 (31%), Positives = 14/35 (40%)
 Frame = +3

Query: 30  CKLRF*HVLQIVHPHCSVGGRGFRQPQPQA*ASAD 134
           C+ RF     +VH  C       R P P   A+ D
Sbjct: 252 CRGRFRRRHHLVHHKCGGEEEAERAPAPAVRAAGD 286


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 50,113
Number of Sequences: 336
Number of extensions: 722
Number of successful extensions: 11
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  7908675
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)