Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_F_P02
         (380 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U23451-3|AAC46744.1|  106|Caenorhabditis elegans Insulin related...    31   0.37 
Z92826-6|CAM06583.1|  111|Caenorhabditis elegans Hypothetical pr...    28   2.6  
AC024832-3|AAF59615.1|  121|Caenorhabditis elegans Hypothetical ...    27   6.0  

>U23451-3|AAC46744.1|  106|Caenorhabditis elegans Insulin related
           protein 4 protein.
          Length = 106

 Score = 30.7 bits (66), Expect = 0.37
 Identities = 10/26 (38%), Positives = 18/26 (69%)
 Frame = +2

Query: 2   GRPMTCKENLQVALLTCSTNCSPSLL 79
           G P T +E++ +A + C+T C+PS +
Sbjct: 73  GEPCTPQEDMDIATVCCTTQCTPSYI 98


>Z92826-6|CAM06583.1|  111|Caenorhabditis elegans Hypothetical
           protein C18D11.9 protein.
          Length = 111

 Score = 27.9 bits (59), Expect = 2.6
 Identities = 7/8 (87%), Positives = 8/8 (100%)
 Frame = -2

Query: 115 WGWGWRKP 92
           WGWGWR+P
Sbjct: 76  WGWGWRRP 83


>AC024832-3|AAF59615.1|  121|Caenorhabditis elegans Hypothetical
           protein Y57E12AL.2 protein.
          Length = 121

 Score = 26.6 bits (56), Expect = 6.0
 Identities = 11/21 (52%), Positives = 16/21 (76%)
 Frame = +1

Query: 55  YKLFTLIALLVAVAFASPNPK 117
           +K F++ ALL  VAFA+ NP+
Sbjct: 30  FKHFSVFALLAVVAFANRNPE 50


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,954,385
Number of Sequences: 27780
Number of extensions: 67104
Number of successful extensions: 205
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 197
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 205
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 567749674
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)