BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P05_F_O18
(837 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_02_0714 + 20343864-20344385,20344928-20345098,20345933-203459... 58 1e-08
08_02_0711 + 20305341-20305859,20306278-20306448,20306995-203070... 54 1e-07
08_02_0710 + 20275834-20276352,20276970-20277140,20277692-202777... 54 1e-07
08_02_0967 - 23110154-23110240,23110620-23110673,23111010-231111... 52 4e-07
08_02_0970 - 23140109-23140192,23140604-23140657,23140783-231407... 52 6e-07
02_04_0092 + 19655747-19655825,19656362-19656567,19656990-196570... 52 6e-07
09_04_0371 - 17020539-17020607,17020697-17020747,17020888-170210... 48 9e-06
12_01_0343 + 2640822-2641106,2641488-2641556,2641708-2641887,264... 47 2e-05
04_03_0863 + 20397161-20397239,20397464-20397672,20397768-203978... 46 3e-05
11_01_0330 + 2472195-2472743 41 0.001
11_01_0329 + 2471015-2471075,2471152-2471432 32 0.65
01_01_1021 + 8061007-8061150,8061244-8061708 31 0.86
09_03_0046 + 11862923-11863112,11863225-11863406,11863522-118636... 30 2.6
03_03_0133 + 14727510-14727651,14727742-14728078,14728448-14728763 29 3.5
03_01_0208 + 1642041-1642118,1642200-1642310,1643157-1643318,164... 29 3.5
09_02_0318 - 7191763-7191879,7192375-7192494,7192568-7192666,719... 29 4.6
07_01_0562 + 4175711-4175863,4175944-4176393 29 6.1
11_01_0808 - 7183656-7183671,7184062-7184324,7184768-7184857,718... 28 8.0
08_02_1078 + 24179558-24179936,24180577-24180634,24180721-241808... 28 8.0
03_02_0400 - 8135283-8135490,8136047-8136213,8136289-8136477,813... 28 8.0
>08_02_0714 +
20343864-20344385,20344928-20345098,20345933-20345986,
20346300-20346386
Length = 277
Score = 57.6 bits (133), Expect = 1e-08
Identities = 44/131 (33%), Positives = 62/131 (47%), Gaps = 8/131 (6%)
Frame = +1
Query: 130 DNEWGYT--CENGPATWIEKFPQ----ARGTRQSPVDIVTSRVKSGASLPPLKWRYSVNH 291
D+++GY GP W P+ + G QSP+++ + L L + Y N
Sbjct: 29 DDQFGYIPGTPRGPENWGSLKPEWATCSSGEMQSPINLGLLDLTLAPGLGDLNYTYR-NA 87
Query: 292 PRSIVNPGYCWRVDENGYDSELKGGPL--NNDVYKLQQWHCHWGALNGEGSEHTVDGRSF 465
++VN G+ V +G D G L N Y+L+Q HW A SEH VDGR +
Sbjct: 88 NATVVNRGHDIMVRFDGGDDAAAAGGLVINGTAYRLRQ--VHWHA----PSEHAVDGRRY 141
Query: 466 SGELHLVHWNT 498
ELH+VH NT
Sbjct: 142 DMELHMVHLNT 152
Score = 44.8 bits (101), Expect = 9e-05
Identities = 19/35 (54%), Positives = 25/35 (71%)
Frame = +2
Query: 704 RTQGSLTTPPCTESVIWLLFKEPVQVSAEQLSLMR 808
R GSLTTPPCTE VIW + ++ VS QL+L++
Sbjct: 210 RYMGSLTTPPCTEGVIWTIVRKVHTVSLSQLALLK 244
>08_02_0711 +
20305341-20305859,20306278-20306448,20306995-20307048,
20307389-20307475
Length = 276
Score = 54.0 bits (124), Expect = 1e-07
Identities = 39/116 (33%), Positives = 55/116 (47%), Gaps = 4/116 (3%)
Frame = +1
Query: 160 GPATWIEKFPQ----ARGTRQSPVDIVTSRVKSGASLPPLKWRYSVNHPRSIVNPGYCWR 327
GP W P+ + G QSP+++ + L L + Y N S+VN G+
Sbjct: 44 GPQNWGSLKPEWATCSSGKMQSPINLGLLDLTLAPGLGNLNYTYK-NANASVVNRGHDIM 102
Query: 328 VDENGYDSELKGGPLNNDVYKLQQWHCHWGALNGEGSEHTVDGRSFSGELHLVHWN 495
V +G LK +N Y+L+Q H H SEHT+DGR + ELH+VH N
Sbjct: 103 VRFDGDAGSLK---INGTAYQLRQMHWH------TPSEHTIDGRRYDMELHMVHLN 149
Score = 41.9 bits (94), Expect = 6e-04
Identities = 17/35 (48%), Positives = 24/35 (68%)
Frame = +2
Query: 704 RTQGSLTTPPCTESVIWLLFKEPVQVSAEQLSLMR 808
R GS TTPPCTE VIW + ++ VS Q++L++
Sbjct: 209 RYMGSFTTPPCTEGVIWTVVRKVHTVSLSQITLLK 243
>08_02_0710 +
20275834-20276352,20276970-20277140,20277692-20277745,
20277848-20277934
Length = 276
Score = 54.0 bits (124), Expect = 1e-07
Identities = 39/116 (33%), Positives = 55/116 (47%), Gaps = 4/116 (3%)
Frame = +1
Query: 160 GPATWIEKFPQ----ARGTRQSPVDIVTSRVKSGASLPPLKWRYSVNHPRSIVNPGYCWR 327
GP W P+ + G QSP+++ + L L + Y N S+VN G+
Sbjct: 45 GPQNWGSLKPEWATCSSGKMQSPINLGLLDLTLAPGLGNLNYTYQ-NANASVVNRGHDIM 103
Query: 328 VDENGYDSELKGGPLNNDVYKLQQWHCHWGALNGEGSEHTVDGRSFSGELHLVHWN 495
V +G LK +N Y+L+Q H H SEHT+DGR + ELH+VH N
Sbjct: 104 VRFDGDAGSLK---INGTAYQLRQMHWH------TPSEHTIDGRRYDMELHMVHLN 150
Score = 41.9 bits (94), Expect = 6e-04
Identities = 17/35 (48%), Positives = 24/35 (68%)
Frame = +2
Query: 704 RTQGSLTTPPCTESVIWLLFKEPVQVSAEQLSLMR 808
R GS TTPPCTE VIW + ++ VS Q++L++
Sbjct: 209 RYMGSFTTPPCTEGVIWTVVRKVRTVSLSQITLLK 243
>08_02_0967 -
23110154-23110240,23110620-23110673,23111010-23111177,
23111432-23111534,23111664-23111988,23112091-23112181
Length = 275
Score = 52.4 bits (120), Expect = 4e-07
Identities = 41/121 (33%), Positives = 55/121 (45%), Gaps = 4/121 (3%)
Frame = +1
Query: 154 ENGPATWIEKFPQ----ARGTRQSPVDIVTSRVKSGASLPPLKWRYSVNHPRSIVNPGYC 321
E GP W + P+ G QSP+D+ RVK L L Y SIVN G+
Sbjct: 43 EKGPEHWGKLKPEWAQCGAGEMQSPIDLSHERVKLVRDLGYLDDSYRAAEA-SIVNRGHD 101
Query: 322 WRVDENGYDSELKGGPLNNDVYKLQQWHCHWGALNGEGSEHTVDGRSFSGELHLVHWNTS 501
V +D + +N Y L+Q H H +EH+VDGR + ELH+VH +
Sbjct: 102 IMVR---FDGDAGSVVINGTAYYLRQLHWH------SPTEHSVDGRRYDMELHMVHESAE 152
Query: 502 K 504
K
Sbjct: 153 K 153
Score = 44.4 bits (100), Expect = 1e-04
Identities = 19/36 (52%), Positives = 24/36 (66%)
Frame = +2
Query: 704 RTQGSLTTPPCTESVIWLLFKEPVQVSAEQLSLMRK 811
R GSLTTPPCT+ V+W + K VS QL L+R+
Sbjct: 208 RYMGSLTTPPCTQGVVWTIVKRVRTVSRYQLDLLRE 243
>08_02_0970 -
23140109-23140192,23140604-23140657,23140783-23140794,
23140842-23141009,23141371-23141473,23141574-23141680,
23143766-23143977,23144136-23144223
Length = 275
Score = 52.0 bits (119), Expect = 6e-07
Identities = 43/126 (34%), Positives = 60/126 (47%), Gaps = 6/126 (4%)
Frame = +1
Query: 130 DNEWGYT--CENGPATWIEKFPQ----ARGTRQSPVDIVTSRVKSGASLPPLKWRYSVNH 291
+ ++GY ENGP W P+ G QSP+D+ R+ +L L + Y +
Sbjct: 32 ERKFGYVPGTENGPGNWSRLDPRWAKCNTGNMQSPIDLSHERLMR--NLGYLDYSY-LPA 88
Query: 292 PRSIVNPGYCWRVDENGYDSELKGGPLNNDVYKLQQWHCHWGALNGEGSEHTVDGRSFSG 471
S+VN G+ V G + +N YKL+Q H H SEHTV+GR +
Sbjct: 89 EASMVNRGHDIEVKFMGNAGRVV---INGKAYKLKQLHWH------TPSEHTVNGRRYDM 139
Query: 472 ELHLVH 489
ELHLVH
Sbjct: 140 ELHLVH 145
Score = 41.1 bits (92), Expect = 0.001
Identities = 21/40 (52%), Positives = 25/40 (62%), Gaps = 4/40 (10%)
Frame = +2
Query: 704 RTQGSLTTPPCTESVIWLLFKE----PVQVSAEQLSLMRK 811
R GSLTTPPCTE VIW +FK V+ QL L+R+
Sbjct: 205 RYMGSLTTPPCTEGVIWTVFKRVFLLAQTVAQYQLDLLRE 244
>02_04_0092 +
19655747-19655825,19656362-19656567,19656990-19657096,
19657189-19657291,19657699-19657881,19657972-19658094
Length = 266
Score = 52.0 bits (119), Expect = 6e-07
Identities = 38/125 (30%), Positives = 62/125 (49%), Gaps = 4/125 (3%)
Frame = +1
Query: 127 ADNEWGYTCENGPATWIEKFPQ----ARGTRQSPVDIVTSRVKSGASLPPLKWRYSVNHP 294
+D +GY+ GP W P ++GT QSP++I+ L PL+ Y+ +
Sbjct: 26 SDVVFGYSGSTGPEHWGSLSPNFTTCSKGTYQSPINILKDDAVYNPKLEPLEMDYTAANT 85
Query: 295 RSIVNPGYCWRVDENGYDSELKGGPLNNDVYKLQQWHCHWGALNGEGSEHTVDGRSFSGE 474
+IV+ + + N +K ++ YKL+Q H H SEHT++G+ F+ E
Sbjct: 86 -TIVDNVFNIALRYNDTAGTVK---VDGKKYKLRQLHWH------SPSEHTINGQRFAVE 135
Query: 475 LHLVH 489
LH+VH
Sbjct: 136 LHMVH 140
Score = 44.0 bits (99), Expect = 2e-04
Identities = 19/35 (54%), Positives = 26/35 (74%)
Frame = +2
Query: 704 RTQGSLTTPPCTESVIWLLFKEPVQVSAEQLSLMR 808
R GSLTTPPCTE+VIW +F E +++ EQ + +R
Sbjct: 205 RYVGSLTTPPCTENVIWNIFGEIREMTKEQAAALR 239
>09_04_0371 -
17020539-17020607,17020697-17020747,17020888-17021058,
17023296-17023404,17023570-17023676,17024429-17024640,
17024805-17024952
Length = 288
Score = 48.0 bits (109), Expect = 9e-06
Identities = 46/150 (30%), Positives = 69/150 (46%), Gaps = 5/150 (3%)
Frame = +1
Query: 67 FTSKXTDTRVVVSDISKVIMADNEWGYTCE-NGPATWIEKFPQ----ARGTRQSPVDIVT 231
F+S T TR +D + M+ +GY + GPA W + G +QSP+DI T
Sbjct: 35 FSSAITPTR---ADHVEGHMSHEMFGYENDATGPAKWGSLHKEWAVCGDGKKQSPIDITT 91
Query: 232 SRVKSGASLPPLKWRYSVNHPRSIVNPGYCWRVDENGYDSELKGGPLNNDVYKLQQWHCH 411
V+ PL Y +I N G+ + + +S+L + Y L+Q H H
Sbjct: 92 --VEPQKVKEPLMQAYKAG-ATTIQNRGHDYMLKWKDGNSKLT---VQGKEYTLKQVHWH 145
Query: 412 WGALNGEGSEHTVDGRSFSGELHLVHWNTS 501
E SEHT++G F E+H+VH + S
Sbjct: 146 ------EPSEHTINGTRFDAEMHMVHEDPS 169
Score = 43.6 bits (98), Expect = 2e-04
Identities = 18/35 (51%), Positives = 23/35 (65%)
Frame = +2
Query: 704 RTQGSLTTPPCTESVIWLLFKEPVQVSAEQLSLMR 808
R GSLTTPPCTE VIW + + S EQ+ L++
Sbjct: 228 RYDGSLTTPPCTEGVIWTIMSKIGDASKEQIDLLK 262
>12_01_0343 +
2640822-2641106,2641488-2641556,2641708-2641887,
2642015-2642081,2643237-2644015
Length = 459
Score = 47.2 bits (107), Expect = 2e-05
Identities = 40/115 (34%), Positives = 56/115 (48%), Gaps = 4/115 (3%)
Frame = +1
Query: 157 NGPATWIEKFPQAR----GTRQSPVDIVTSRVKSGASLPPLKWRYSVNHPRSIVNPGYCW 324
+GP+ W + P+ R G QSP+DI T V + L L Y+ + +IVN G
Sbjct: 218 DGPSNWGKLSPEYRMCGEGRSQSPIDINTKTVVPRSDLDTLDRNYNAVNA-TIVNNGKDI 276
Query: 325 RVDENGYDSELKGGPLNNDVYKLQQWHCHWGALNGEGSEHTVDGRSFSGELHLVH 489
+ +G E+ + Y+ Q HW A SEHT++GR F ELHLVH
Sbjct: 277 TMKFHG---EVGQVIIAGKPYRFQA--IHWHA----PSEHTINGRRFPLELHLVH 322
Score = 40.3 bits (90), Expect = 0.002
Identities = 17/34 (50%), Positives = 24/34 (70%)
Frame = +2
Query: 704 RTQGSLTTPPCTESVIWLLFKEPVQVSAEQLSLM 805
R GSLTTPPC E+V+W + + ++S EQL L+
Sbjct: 389 RYGGSLTTPPCGENVVWSVLGKVREISQEQLHLL 422
>04_03_0863 +
20397161-20397239,20397464-20397672,20397768-20397874,
20397996-20398098,20398236-20398412,20398549-20398704
Length = 276
Score = 46.4 bits (105), Expect = 3e-05
Identities = 38/124 (30%), Positives = 58/124 (46%), Gaps = 4/124 (3%)
Frame = +1
Query: 136 EWGYTCENGPATW---IEKFPQ-ARGTRQSPVDIVTSRVKSGASLPPLKWRYSVNHPRSI 303
++GYT GP W F + + G +QSP+DI T+ + ++ PL Y+ + +
Sbjct: 30 KFGYTGSIGPDFWGNLSADFTRCSNGKQQSPIDIDTNNLVHELNMEPLHRNYTAANATLV 89
Query: 304 VNPGYCWRVDENGYDSELKGGPLNNDVYKLQQWHCHWGALNGEGSEHTVDGRSFSGELHL 483
N + V Y+ +N Y L+Q H H SEHT++G F ELH+
Sbjct: 90 DN---IFNVALR-YEEAAGVLSINGVKYTLKQMHWH------SPSEHTINGFRFPLELHM 139
Query: 484 VHWN 495
VH N
Sbjct: 140 VHTN 143
Score = 36.3 bits (80), Expect = 0.030
Identities = 19/41 (46%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Frame = +2
Query: 704 RTQGSLTTPPCTESVIWLLFKEPVQVSAEQLS-LMRKLKCG 823
R GSLTTPPC E+VIW + P +++ +Q + LM L G
Sbjct: 204 RYVGSLTTPPCAENVIWNIPAMPREMTPQQAADLMAPLDEG 244
>11_01_0330 + 2472195-2472743
Length = 182
Score = 40.7 bits (91), Expect = 0.001
Identities = 18/37 (48%), Positives = 24/37 (64%)
Frame = +2
Query: 704 RTQGSLTTPPCTESVIWLLFKEPVQVSAEQLSLMRKL 814
R GSLT PPCTE V W + + Q+S EQ++L+ L
Sbjct: 115 RYAGSLTAPPCTEDVFWSVLGKIRQISQEQVALITAL 151
>11_01_0329 + 2471015-2471075,2471152-2471432
Length = 113
Score = 31.9 bits (69), Expect = 0.65
Identities = 21/66 (31%), Positives = 34/66 (51%), Gaps = 6/66 (9%)
Frame = +1
Query: 136 EWGYTCEN--GPATWIEKFPQAR----GTRQSPVDIVTSRVKSGASLPPLKWRYSVNHPR 297
++GY + GP W + P + G +QSP+DIVT + S +L L Y+ +
Sbjct: 40 DYGYAAGSKLGPENWGKLSPAYKLCGDGKKQSPIDIVTKQAISNPNLDSLNRTYTAS-DG 98
Query: 298 SIVNPG 315
++VN G
Sbjct: 99 TLVNNG 104
>01_01_1021 + 8061007-8061150,8061244-8061708
Length = 202
Score = 31.5 bits (68), Expect = 0.86
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = -2
Query: 602 TLSSSRCFEPTINRTPKTASPSGFPAASPKLWYLLVF 492
T SSS T +P A+P PAAS KLW +L F
Sbjct: 60 TSSSSPSPATTPTPSPAAAAPKAKPAASTKLWDVLAF 96
>09_03_0046 +
11862923-11863112,11863225-11863406,11863522-11863634,
11863894-11864140,11864333-11864452,11864601-11864604,
11864800-11864846,11864992-11865068,11865381-11865431,
11865519-11865567,11865694-11865718,11866226-11866344
Length = 407
Score = 29.9 bits (64), Expect = 2.6
Identities = 19/61 (31%), Positives = 30/61 (49%)
Frame = -3
Query: 523 PPRSCGTCLCSSEPGGVLRRTSDRPLYVLSPPR*ALPSGNAIVVICKHRC*EVHLLILNH 344
P ++C C ++EPG RR + L R A PSG A ++I + + +I+ H
Sbjct: 119 PSKTCTVCTKAAEPGNRNRRRNTSILL-----RHATPSGTANILIDAGKLRTIDAVIITH 173
Query: 343 S 341
S
Sbjct: 174 S 174
>03_03_0133 + 14727510-14727651,14727742-14728078,14728448-14728763
Length = 264
Score = 29.5 bits (63), Expect = 3.5
Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 4/55 (7%)
Frame = +3
Query: 423 QRGGLR-TYSGRS---LVLRRTPPGSLEHKQVPQLRGGGRKTRWTSRFRSPINGW 575
++GG+R T +G S LVL G+ + V GGGRK RW + R+ W
Sbjct: 165 RKGGMRFTINGHSYFNLVLVSNVGGAGDVHAVAVKAGGGRKARWQAMARNWGQNW 219
>03_01_0208 +
1642041-1642118,1642200-1642310,1643157-1643318,
1643433-1643600,1643683-1643843,1643930-1643991,
1644078-1644127,1644247-1644653,1644760-1644895
Length = 444
Score = 29.5 bits (63), Expect = 3.5
Identities = 18/42 (42%), Positives = 24/42 (57%), Gaps = 4/42 (9%)
Frame = +1
Query: 37 PVHSVDTRLTFTSKXTD---TRVVVSDISKVIM-ADNEWGYT 150
P+ SVD R + S D T V+ D+ KV+ DNEWGY+
Sbjct: 359 PLVSVDFRCSDVSSTIDASLTMVMGDDMVKVVAWYDNEWGYS 400
>09_02_0318 -
7191763-7191879,7192375-7192494,7192568-7192666,
7192846-7192957,7193058-7193161,7193341-7193520,
7193611-7193880,7194364-7194660,7195283-7195477
Length = 497
Score = 29.1 bits (62), Expect = 4.6
Identities = 21/75 (28%), Positives = 31/75 (41%)
Frame = +2
Query: 272 GGTLSIILVPSSILATVGVSTKTAMIQN*KVDLSTTMFTNYNNGIATGERSTGRAQNIQW 451
G +I +P S VS + Q L+ + Y N I G ++ G + +
Sbjct: 95 GANYRLIDIPVSNCLNSNVSKIYVLTQFNSASLNRHLSRAYGNNIG-GYKNEGFVEVL-- 151
Query: 452 TVARSPENSTWFTGT 496
+SPEN WF GT
Sbjct: 152 AAQQSPENPNWFQGT 166
>07_01_0562 + 4175711-4175863,4175944-4176393
Length = 200
Score = 28.7 bits (61), Expect = 6.1
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = -2
Query: 575 PTINRTPKTASPSGFPAASPKLWYLLVF 492
PT +P A+P PAAS LW +L F
Sbjct: 67 PTPTPSPAAAAPRAKPAASTGLWDVLAF 94
>11_01_0808 -
7183656-7183671,7184062-7184324,7184768-7184857,
7184958-7185191
Length = 200
Score = 28.3 bits (60), Expect = 8.0
Identities = 25/105 (23%), Positives = 41/105 (39%)
Frame = -2
Query: 710 GYVQ*AVLVGSSLAGSRGSQNVTLSPLCCTKGSNCTTLSSSRCFEPTINRTPKTASPSGF 531
GY++ + G L RG+ V L PL + ++++ + PT + S
Sbjct: 10 GYLEAILDAGVKLREQRGAAAVQLPPLLPAPEDAASAVATAATYSPTRYFVEEVVSRFD- 68
Query: 530 PAASPKLWYLLVFQ*TRWSSPENERPSTVCSEPSPLSAPQWQCHC 396
K W +V R S N R +C ++ + QCHC
Sbjct: 69 DRDLHKTWTKVVAM--RNSQERNNRLENLCWRIWNVARRKKQCHC 111
>08_02_1078 +
24179558-24179936,24180577-24180634,24180721-24180804,
24180908-24181010,24181359-24181649
Length = 304
Score = 28.3 bits (60), Expect = 8.0
Identities = 15/33 (45%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Frame = -2
Query: 662 RGSQNVTLSPLCCTKGSNCTTLSSSR-CFEPTI 567
R S N+TLS L ++ SN ++LSSS +EP +
Sbjct: 35 RSSSNLTLSSLSLSQNSNDSSLSSSNSSWEPKV 67
>03_02_0400 -
8135283-8135490,8136047-8136213,8136289-8136477,
8136560-8136655,8136746-8136874,8136947-8137123,
8137256-8137366,8138592-8138792,8139022-8139186,
8139293-8139527,8139618-8139745,8139833-8139928,
8140017-8140112,8140252-8140325,8140393-8140462,
8140556-8140665,8140753-8140906,8141040-8141155,
8141259-8141379,8141464-8141641,8142331-8142489,
8142619-8142732,8142821-8143000,8143098-8143177
Length = 1117
Score = 28.3 bits (60), Expect = 8.0
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +1
Query: 406 CHWGALNGEGSEHTVDGRSFSGELHLVHWNTSK 504
C A + +GS G S GE HLV WN S+
Sbjct: 548 CTTMAYSADGSRLFSCGTSKDGESHLVEWNESE 580
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,001,429
Number of Sequences: 37544
Number of extensions: 633865
Number of successful extensions: 2148
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 2000
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2139
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2315199948
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -