Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_F_O18
         (837 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    26   0.37 
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    26   0.37 
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                23   2.6  
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    23   4.6  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    23   4.6  
U70841-1|AAC47455.1|  377|Apis mellifera ultraviolet sensitive o...    22   6.1  
AF004168-1|AAC13417.1|  377|Apis mellifera blue-sensitive opsin ...    22   6.1  
DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chlor...    22   8.1  

>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 26.2 bits (55), Expect = 0.37
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = +1

Query: 391 LQQWHCHWGALNGEGSEHTVDG 456
           +QQW+ +WG L G  S  T+DG
Sbjct: 333 VQQWNSYWGIL-GFPSAPTIDG 353


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 26.2 bits (55), Expect = 0.37
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = +1

Query: 391 LQQWHCHWGALNGEGSEHTVDG 456
           +QQW+ +WG L G  S  T+DG
Sbjct: 333 VQQWNSYWGIL-GFPSAPTIDG 353


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 23.4 bits (48), Expect = 2.6
 Identities = 11/34 (32%), Positives = 14/34 (41%)
 Frame = +2

Query: 644 LHFASPSTLPSCYQPRQLTGRTQGSLTTPPCTES 745
           LH+  P TL   Y     +    G+    PCT S
Sbjct: 364 LHYRQPPTLSESYSSYVNSMYASGAQFATPCTPS 397


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 22.6 bits (46), Expect = 4.6
 Identities = 12/43 (27%), Positives = 19/43 (44%)
 Frame = +1

Query: 655 EPLDPAKLLPTKTAYWTYPGVFDNTTVHGVGDLAPLQRTRTSF 783
           +PL P  L      Y  YP  F ++   G+GD+  ++     F
Sbjct: 20  KPL-PENLKEDLIVYQVYPRSFKDSNGDGIGDIEGIKEKLDHF 61


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 22.6 bits (46), Expect = 4.6
 Identities = 12/43 (27%), Positives = 19/43 (44%)
 Frame = +1

Query: 655 EPLDPAKLLPTKTAYWTYPGVFDNTTVHGVGDLAPLQRTRTSF 783
           +PL P  L      Y  YP  F ++   G+GD+  ++     F
Sbjct: 20  KPL-PENLKEDLIVYQVYPRSFKDSNGDGIGDIEGIKEKLDHF 61


>U70841-1|AAC47455.1|  377|Apis mellifera ultraviolet sensitive
           opsin protein.
          Length = 377

 Score = 22.2 bits (45), Expect = 6.1
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = +1

Query: 271 WRYSVNHPR 297
           W Y++NHPR
Sbjct: 334 WIYAINHPR 342


>AF004168-1|AAC13417.1|  377|Apis mellifera blue-sensitive opsin
           protein.
          Length = 377

 Score = 22.2 bits (45), Expect = 6.1
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = +1

Query: 271 WRYSVNHPR 297
           W Y++NHPR
Sbjct: 334 WIYAINHPR 342


>DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 428

 Score = 21.8 bits (44), Expect = 8.1
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = +1

Query: 211 SPVDIVTSRVKSGASLPPLKWRYSVN 288
           S + + T   KS ASLPP+ +  +V+
Sbjct: 283 SLLTLSTQHAKSQASLPPVSYLKAVD 308


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 254,502
Number of Sequences: 438
Number of extensions: 6559
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26824317
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)