Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_F_O17
         (869 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_03_0104 - 12389907-12389943,12390086-12390203,12390339-123903...    94   1e-19
08_02_0653 - 19729325-19729378,19730137-19730174,19730391-197304...    59   5e-09
08_02_0303 + 15566152-15566209,15566265-15566363,15566465-155665...    53   3e-07
07_03_0223 - 15368631-15368682,15368765-15368838,15369312-153693...    52   8e-07
07_03_0848 + 21992610-21992724,21993009-21993137,21993625-219937...    45   7e-05
04_03_0955 + 21215380-21215991,21216058-21216639                       28   8.5  
01_06_0653 + 30891231-30891276,30891624-30892898,30893775-30893878     28   8.5  

>09_03_0104 -
           12389907-12389943,12390086-12390203,12390339-12390393,
           12391607-12391702
          Length = 101

 Score = 94.3 bits (224), Expect = 1e-19
 Identities = 49/93 (52%), Positives = 57/93 (61%)
 Frame = +3

Query: 183 STHFWGPVANWGIPLAAIADTRKDPNFISGKMTFALSLYSLMFMRFAWKVQPRNLLLFAC 362
           +THFWGPVANWG  LA + D  K P  ISG MT  L      FMRFAW VQPRN LL AC
Sbjct: 17  TTHFWGPVANWGFVLAGLVDMNKPPEMISGNMTAGL------FMRFAWMVQPRNYLLLAC 70

Query: 363 HFTNECAQLTQGARFINYHYIQGPKEVQEKKSQ 461
           H +NE  QL Q +R+      QG  E +E ++Q
Sbjct: 71  HASNESVQLYQMSRWAR---AQGYLEKKEPEAQ 100


>08_02_0653 -
           19729325-19729378,19730137-19730174,19730391-19730445,
           19731401-19731496
          Length = 80

 Score = 58.8 bits (136), Expect = 5e-09
 Identities = 25/61 (40%), Positives = 33/61 (54%)
 Frame = +3

Query: 183 STHFWGPVANWGIPLAAIADTRKDPNFISGKMTFALSLYSLMFMRFAWKVQPRNLLLFAC 362
           +THFWGPVANWG  LA + D  K P  ISG MT  ++++     +  W +  R  L    
Sbjct: 17  TTHFWGPVANWGFVLAGLVDMNKPPEMISGNMTADVTIFFYKLDQIKWNLALRQALHPGA 76

Query: 363 H 365
           H
Sbjct: 77  H 77


>08_02_0303 +
           15566152-15566209,15566265-15566363,15566465-15566517,
           15566695-15566768,15566858-15566909
          Length = 111

 Score = 52.8 bits (121), Expect = 3e-07
 Identities = 27/88 (30%), Positives = 42/88 (47%)
 Frame = +3

Query: 177 LMSTHFWGPVANWGIPLAAIADTRKDPNFISGKMTFALSLYSLMFMRFAWKVQPRNLLLF 356
           L   HFW P   WGI +A +AD  K P  IS     A++   +++ R++  + P+N  LF
Sbjct: 17  LCDVHFWAPTFKWGISIANVADFAKPPEKISYPQQVAVACTGVIWSRYSMVITPKNWNLF 76

Query: 357 ACHFTNECAQLTQGARFINYHYIQGPKE 440
           + +       L Q +R I   Y    K+
Sbjct: 77  SVNVAMAGTGLYQLSRKIRKDYFSDQKD 104


>07_03_0223 -
           15368631-15368682,15368765-15368838,15369312-15369364,
           15369486-15369584,15370655-15370715,15372741-15372830
          Length = 142

 Score = 51.6 bits (118), Expect = 8e-07
 Identities = 26/84 (30%), Positives = 41/84 (48%)
 Frame = +3

Query: 189 HFWGPVANWGIPLAAIADTRKDPNFISGKMTFALSLYSLMFMRFAWKVQPRNLLLFACHF 368
           HFW P   WGI +A +AD  K P  IS     A++   +++ R++  + P+N  LF+ + 
Sbjct: 52  HFWAPTFKWGISIANVADFAKPPEKISYPQQVAVACTGVIWSRYSMVITPKNWNLFSVNV 111

Query: 369 TNECAQLTQGARFINYHYIQGPKE 440
                 L Q +R I   Y    K+
Sbjct: 112 AMAGTGLYQLSRKIRKDYFSDEKD 135


>07_03_0848 +
           21992610-21992724,21993009-21993137,21993625-21993723,
           21993833-21993885,21994157-21994230,21994382-21994433
          Length = 173

 Score = 45.2 bits (102), Expect = 7e-05
 Identities = 23/83 (27%), Positives = 37/83 (44%)
 Frame = +3

Query: 189 HFWGPVANWGIPLAAIADTRKDPNFISGKMTFALSLYSLMFMRFAWKVQPRNLLLFACHF 368
           HFW P   WGI +A +AD  K P  IS      ++   +++ R+   + P N  L + + 
Sbjct: 83  HFWAPTFKWGISIANVADFAKPPEMISYPQQVVVACSGVIWARWGMVITPINWNLSSVNA 142

Query: 369 TNECAQLTQGARFINYHYIQGPK 437
                 + Q +R I + Y    K
Sbjct: 143 AMAVTGVCQLSRKIRHDYFSDEK 165


>04_03_0955 + 21215380-21215991,21216058-21216639
          Length = 397

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 4/55 (7%)
 Frame = +3

Query: 75  FSKLYDTEKFKKFKMSALARK--LVNQLKSKEFRDYLM--STHFWGPVANWGIPL 227
           + + +    FK +K   L     L + ++ K+   Y M  +TH W PV  W +PL
Sbjct: 174 YGQQHKKTSFKYWKCQLLPPPPYLRDPMQMKDVGTYCMDIATHTWSPVGKWMLPL 228


>01_06_0653 + 30891231-30891276,30891624-30892898,30893775-30893878
          Length = 474

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
 Frame = -3

Query: 213 NWQQGPRSV-CSLNSP*TPCFSAGSLVSLLKHSF 115
           NW  GP +V CS   P  PC+   +L S   ++F
Sbjct: 380 NWACGPGNVDCSAIQPSQPCYQPDTLASHASYAF 413


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,359,810
Number of Sequences: 37544
Number of extensions: 415436
Number of successful extensions: 924
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 893
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 923
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2444475072
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)