Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_F_O17
         (869 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z32683-8|CAA83622.1|  160|Caenorhabditis elegans Hypothetical pr...   136   3e-32
U97191-3|AAB52430.2|  133|Caenorhabditis elegans Hypothetical pr...    40   0.002
Z81594-7|CAJ55256.1| 4404|Caenorhabditis elegans Hypothetical pr...    34   0.11 
Z80221-3|CAB02312.2| 4404|Caenorhabditis elegans Hypothetical pr...    34   0.11 
AL032619-1|CAJ55259.1| 4404|Caenorhabditis elegans Hypothetical ...    34   0.11 
Z68302-5|CAA92633.2|  382|Caenorhabditis elegans Hypothetical pr...    29   3.3  
U58750-6|AAB00646.1| 2049|Caenorhabditis elegans Rod (drosophila...    29   3.3  
AL021493-6|CAA16394.2|  781|Caenorhabditis elegans Hypothetical ...    29   4.3  
AF040641-2|AAB94946.1|  311|Caenorhabditis elegans Hypothetical ...    29   5.7  
AF003146-4|AAB54200.2|  650|Caenorhabditis elegans Hypothetical ...    28   7.5  
U40953-1|AAB52646.1|  120|Caenorhabditis elegans Hypothetical pr...    28   10.0 

>Z32683-8|CAA83622.1|  160|Caenorhabditis elegans Hypothetical
           protein R07E5.13 protein.
          Length = 160

 Score =  136 bits (328), Expect = 3e-32
 Identities = 60/99 (60%), Positives = 75/99 (75%), Gaps = 3/99 (3%)
 Frame = +3

Query: 147 QLKSKEFRDYLMSTHFWGPVANWGIPLAAIADTRKDPNFISGKMTFALSLYSLMFMRFAW 326
           Q  + E++ Y +STHFWGPVANWG+PLAA+ D +K+P+ ISG MT AL +YS +FMRFAW
Sbjct: 14  QHSTAEWKHYFLSTHFWGPVANWGLPLAALGDLKKNPDMISGPMTSALLIYSSVFMRFAW 73

Query: 327 KVQPRNLLLFACHFTNECAQLTQGARFINY---HYIQGP 434
            VQPRNLLLFACHF N  AQ  Q  RF+N+   HY++ P
Sbjct: 74  HVQPRNLLLFACHFANFSAQGAQLGRFVNHNYLHYVEDP 112


>U97191-3|AAB52430.2|  133|Caenorhabditis elegans Hypothetical
           protein F53F10.3 protein.
          Length = 133

 Score = 39.9 bits (89), Expect = 0.002
 Identities = 23/86 (26%), Positives = 36/86 (41%)
 Frame = +3

Query: 192 FWGPVANWGIPLAAIADTRKDPNFISGKMTFALSLYSLMFMRFAWKVQPRNLLLFACHFT 371
           FW P   W +  A +AD  +  + +S     AL     ++ R+   + P N  L + +F 
Sbjct: 42  FWAPTIKWTLIGAGLADLARPADKLSLYQNSALFATGAIWTRYCLVITPINYYLSSVNFF 101

Query: 372 NECAQLTQGARFINYHYIQGPKEVQE 449
             C  L Q  R  +Y Y     E +E
Sbjct: 102 VMCTGLAQLCRIAHYRYQNPDWETKE 127


>Z81594-7|CAJ55256.1| 4404|Caenorhabditis elegans Hypothetical
           protein ZC247.1 protein.
          Length = 4404

 Score = 34.3 bits (75), Expect = 0.11
 Identities = 20/51 (39%), Positives = 31/51 (60%), Gaps = 4/51 (7%)
 Frame = +1

Query: 412 TTTTSKVLKRSKKRKANDDVTLV*ENTLGFNYDVTSQLT----ISVAKSDN 552
           TTTT K+L+ S     +DD  LV +NTL  + D+T + T    + V+KS++
Sbjct: 144 TTTTYKILEVSDSDSLSDDYELVDDNTLTVDIDLTERATSPSYVIVSKSES 194


>Z80221-3|CAB02312.2| 4404|Caenorhabditis elegans Hypothetical
           protein ZC247.1 protein.
          Length = 4404

 Score = 34.3 bits (75), Expect = 0.11
 Identities = 20/51 (39%), Positives = 31/51 (60%), Gaps = 4/51 (7%)
 Frame = +1

Query: 412 TTTTSKVLKRSKKRKANDDVTLV*ENTLGFNYDVTSQLT----ISVAKSDN 552
           TTTT K+L+ S     +DD  LV +NTL  + D+T + T    + V+KS++
Sbjct: 144 TTTTYKILEVSDSDSLSDDYELVDDNTLTVDIDLTERATSPSYVIVSKSES 194


>AL032619-1|CAJ55259.1| 4404|Caenorhabditis elegans Hypothetical
           protein ZC247.1 protein.
          Length = 4404

 Score = 34.3 bits (75), Expect = 0.11
 Identities = 20/51 (39%), Positives = 31/51 (60%), Gaps = 4/51 (7%)
 Frame = +1

Query: 412 TTTTSKVLKRSKKRKANDDVTLV*ENTLGFNYDVTSQLT----ISVAKSDN 552
           TTTT K+L+ S     +DD  LV +NTL  + D+T + T    + V+KS++
Sbjct: 144 TTTTYKILEVSDSDSLSDDYELVDDNTLTVDIDLTERATSPSYVIVSKSES 194


>Z68302-5|CAA92633.2|  382|Caenorhabditis elegans Hypothetical
           protein ZK792.2 protein.
          Length = 382

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 29/89 (32%), Positives = 37/89 (41%), Gaps = 4/89 (4%)
 Frame = -2

Query: 355 KSNRFLGWTFQANLMNISE*RDRAKVIFPLIKFGSFLVSAMAASGIPQLATGPQKCVLIK 176
           K N F GWT   NL+N          +FP + F  F V  MA +   +      +CV+  
Sbjct: 210 KRNLFWGWTLFMNLLNGITWETTG--LFPRVTFCDFQVREMAGNNRDETV----ECVIGI 263

Query: 175 *SLNS--LLFSWF-TSFLA-KALILNFLN 101
              N    LF WF   FL    LI +F N
Sbjct: 264 NEFNEKIFLFFWFWLVFLVFSTLIAHFYN 292


>U58750-6|AAB00646.1| 2049|Caenorhabditis elegans Rod (drosophila
           roughdeal) homologprotein 1 protein.
          Length = 2049

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 14/40 (35%), Positives = 19/40 (47%)
 Frame = +3

Query: 336 PRNLLLFACHFTNECAQLTQGARFINYHYIQGPKEVQEKK 455
           P  +    CH T+   QL  G+R  N+H I  P +V   K
Sbjct: 124 PHEIDFVVCHTTSSVCQLIFGSRSDNWHTITLPGDVAASK 163


>AL021493-6|CAA16394.2|  781|Caenorhabditis elegans Hypothetical
           protein Y51A2B.6 protein.
          Length = 781

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
 Frame = +2

Query: 254 SKFYKWKND---FCPVSLLADVHEVRLEGPAEEPVALRLSFYERMRSAHPRSQVYKL 415
           +KF K K       P++L   +  V++EG  EE   L LS+YE++    P  +  KL
Sbjct: 468 NKFKKLKRKVMLLSPINLDKHLIRVKVEGILEELQQLTLSYYEKLLPFQPYRKYKKL 524


>AF040641-2|AAB94946.1|  311|Caenorhabditis elegans Hypothetical
           protein D1069.1 protein.
          Length = 311

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 10/18 (55%), Positives = 14/18 (77%)
 Frame = -2

Query: 154 FSWFTSFLAKALILNFLN 101
           FSWFT +  KA+I+NF +
Sbjct: 240 FSWFTKYSPKAVIINFFS 257


>AF003146-4|AAB54200.2|  650|Caenorhabditis elegans Hypothetical
           protein F56F4.3 protein.
          Length = 650

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 16/31 (51%), Positives = 17/31 (54%)
 Frame = +3

Query: 126 LARKLVNQLKSKEFRDYLMSTHFWGPVANWG 218
           LARKL   +  KEF   L  TH W P AN G
Sbjct: 604 LARKLTMYIMRKEFVSGLSQTHRWQP-ANEG 633


>U40953-1|AAB52646.1|  120|Caenorhabditis elegans Hypothetical
           protein F53B1.3 protein.
          Length = 120

 Score = 27.9 bits (59), Expect = 10.0
 Identities = 11/42 (26%), Positives = 21/42 (50%)
 Frame = -1

Query: 356 EEQQVPRLDLPSEPHEHQRVERQGKSHFSTYKIWILPCICYG 231
           E+  +PR   P +  +   VE + K+      + I+PC+ +G
Sbjct: 59  EDLMMPRWHCPLQEEDDNDVEEEEKTSLGGKMLIIVPCVIFG 100


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,888,744
Number of Sequences: 27780
Number of extensions: 385502
Number of successful extensions: 953
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 900
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 952
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2181923744
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)