Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_F_O12
         (870 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    24   1.6  
DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GP...    24   2.1  
AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate r...    22   6.4  
DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor p...    22   8.5  
DQ091183-1|AAZ42363.1|  128|Apis mellifera lipophorin receptor p...    22   8.5  

>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 24.2 bits (50), Expect = 1.6
 Identities = 15/47 (31%), Positives = 22/47 (46%), Gaps = 4/47 (8%)
 Frame = +1

Query: 637 GVRKEQHS*EPLAERYSSTQLVQRD----CYEREDYYRTNTLSXENR 765
           G  KE H  E   +  ++     RD     Y RE Y +++ +S ENR
Sbjct: 310 GSDKENHKTEEPNDEVATYDNTPRDFPYYMYSREQYSQSHLISNENR 356


>DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GPCR
           protein.
          Length = 381

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 7/27 (25%), Positives = 16/27 (59%)
 Frame = -2

Query: 83  VFFFVPLYVCSILFKTRALKLTSSRAD 3
           +FF +P+ +  +++    LK+ +S  D
Sbjct: 219 IFFLIPMLIILVVYTRMGLKIRNSTKD 245


>AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate
           receptor 1 protein.
          Length = 953

 Score = 22.2 bits (45), Expect = 6.4
 Identities = 15/59 (25%), Positives = 25/59 (42%)
 Frame = +1

Query: 424 ERRAAAVVTMRSYAPSKAQARVAY*SLHTRSPVVPLQQCRGHCTRRRLYYSWCVYVPSY 600
           ER+  AVV         + A V+Y S     PV+ +       + + ++ S+   VP Y
Sbjct: 93  ERQVYAVVVSHPLTGDLSPAAVSYTSGFYHIPVIGISSRDSAFSDKNIHVSFLRTVPPY 151


>DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor
           protein.
          Length = 157

 Score = 21.8 bits (44), Expect = 8.5
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +1

Query: 823 LGFPVLPHCYHNYR 864
           L +P++ H YH YR
Sbjct: 15  LKYPMVVHVYHPYR 28


>DQ091183-1|AAZ42363.1|  128|Apis mellifera lipophorin receptor
           protein.
          Length = 128

 Score = 21.8 bits (44), Expect = 8.5
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +1

Query: 823 LGFPVLPHCYHNYR 864
           L +P++ H YH YR
Sbjct: 15  LKYPMVVHVYHPYR 28


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 221,346
Number of Sequences: 438
Number of extensions: 4300
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28159464
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)