Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_F_O09
         (520 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    26   0.23 
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   2.8  
EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    22   3.7  
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    21   5.0  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    21   6.5  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    21   8.7  

>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 25.8 bits (54), Expect = 0.23
 Identities = 12/49 (24%), Positives = 21/49 (42%), Gaps = 1/49 (2%)
 Frame = +3

Query: 195 DKYWECLDSQNIKDSSQKPLACTNFRKIFEKSCPTQWVTHF-DRKRDFN 338
           D+YWEC++ Q         L      +   + C   W +++ D K+  N
Sbjct: 43  DRYWECVNGQQELYDCPNGLVFAGKNRGVTEGCDYPWRSNYCDNKQQAN 91


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = -3

Query: 383 FYGFITLFLHFFFKYIEISFSIKM 312
           +Y FI L   ++F Y  I F++ +
Sbjct: 104 YYAFIILLCVYYFYYAFIIFTVHL 127


>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 21.8 bits (44), Expect = 3.7
 Identities = 9/31 (29%), Positives = 15/31 (48%)
 Frame = +3

Query: 195 DKYWECLDSQNIKDSSQKPLACTNFRKIFEK 287
           DKY+EC D Q  +      +   ++   +EK
Sbjct: 53  DKYYECNDGQITEKLCPDGMVFNDYSSEYEK 83


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 6/12 (50%), Positives = 11/12 (91%)
 Frame = +1

Query: 328 EISMYLKKKCKK 363
           EI MY+++KC++
Sbjct: 231 EIDMYMRRKCQE 242


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 10/28 (35%), Positives = 18/28 (64%)
 Frame = -2

Query: 168 ALYQERTSLST*IEIXT*TKLAIGFVYS 85
           ++Y+ER S+ + +   T T LA+G  Y+
Sbjct: 203 SIYEERISVVSGLHEATLTDLALGENYT 230


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = +1

Query: 64  KHLNKYLGIYETYR*LC 114
           KH+  +LG+   YR  C
Sbjct: 533 KHVRAFLGLCNFYRKFC 549


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,209
Number of Sequences: 336
Number of extensions: 2202
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12468463
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)