BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P05_F_O09
(520 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF281078-2|AAF82132.1| 755|Anopheles gambiae vitellogenin 2 pro... 24 2.7
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro... 24 2.7
DQ013245-1|AAY34441.1| 487|Anopheles gambiae adrenodoxin reduct... 24 3.5
AY263177-1|AAP78792.1| 699|Anopheles gambiae TmcC-like protein ... 23 4.7
AY017417-1|AAG54081.1| 383|Anopheles gambiae arrestin protein. 23 4.7
AJ304409-1|CAC39103.2| 383|Anopheles gambiae arrestin protein. 23 4.7
>AF281078-2|AAF82132.1| 755|Anopheles gambiae vitellogenin 2
protein.
Length = 755
Score = 24.2 bits (50), Expect = 2.7
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +3
Query: 324 KRDFNVFKEKMQKEGYE 374
+RD N FKEK E Y+
Sbjct: 421 RRDLNAFKEKQYYEAYK 437
>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1
protein.
Length = 2051
Score = 24.2 bits (50), Expect = 2.7
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +3
Query: 324 KRDFNVFKEKMQKEGYE 374
+RD N FKEK E Y+
Sbjct: 421 RRDLNAFKEKQYYEAYK 437
>DQ013245-1|AAY34441.1| 487|Anopheles gambiae adrenodoxin reductase
protein.
Length = 487
Score = 23.8 bits (49), Expect = 3.5
Identities = 10/32 (31%), Positives = 15/32 (46%), Gaps = 1/32 (3%)
Frame = -1
Query: 367 PSFCIFSLNTLKSRF-LSKCVTHWVGQDFSNI 275
P F++ L+ LS C T W DF ++
Sbjct: 224 PLQAAFTIKELREMLKLSSCTTRWRADDFDHV 255
>AY263177-1|AAP78792.1| 699|Anopheles gambiae TmcC-like protein
protein.
Length = 699
Score = 23.4 bits (48), Expect = 4.7
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +3
Query: 36 FTYLFV*TYKTFK*IFGNIRNLSLALSKFXFQFT 137
++ LFV F+ +F + +L++ LS+F F T
Sbjct: 294 YSPLFVIKISLFRTVFLRLSSLAVLLSRFYFLIT 327
>AY017417-1|AAG54081.1| 383|Anopheles gambiae arrestin protein.
Length = 383
Score = 23.4 bits (48), Expect = 4.7
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +3
Query: 264 NFRKIFEKSCPTQWVTHFDRKRDF 335
NF K+F+K P VT + KRDF
Sbjct: 4 NF-KVFKKCAPNGKVTLYMGKRDF 26
>AJ304409-1|CAC39103.2| 383|Anopheles gambiae arrestin protein.
Length = 383
Score = 23.4 bits (48), Expect = 4.7
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +3
Query: 264 NFRKIFEKSCPTQWVTHFDRKRDF 335
NF K+F+K P VT + KRDF
Sbjct: 4 NF-KVFKKCAPNGKVTLYMGKRDF 26
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 433,824
Number of Sequences: 2352
Number of extensions: 8756
Number of successful extensions: 89
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 89
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 89
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 47360208
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -