Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_F_O09
         (520 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL050231-3|CAB65851.1|  674|Drosophila melanogaster EG:BACR37P7....   108   5e-24
AE014298-2928|AAN09514.1|   77|Drosophila melanogaster CG14235-P...    35   0.076
AE014298-2927|AAN09513.1|   77|Drosophila melanogaster CG14235-P...    35   0.076
AE014298-2926|AAF49015.2|   96|Drosophila melanogaster CG14235-P...    35   0.076
X80028-1|CAA56332.1| 1126|Drosophila melanogaster dhem2 protein.       29   5.0  
AY118579-1|AAM49948.1| 1126|Drosophila melanogaster LD43495p pro...    29   5.0  
AE014296-3665|AAF51820.1| 1126|Drosophila melanogaster CG5837-PA...    29   5.0  

>AL050231-3|CAB65851.1|  674|Drosophila melanogaster
           EG:BACR37P7.3,FBgn0000316;cin protein.
          Length = 674

 Score =  108 bits (259), Expect = 5e-24
 Identities = 48/89 (53%), Positives = 61/89 (68%), Gaps = 4/89 (4%)
 Frame = +3

Query: 147 MSFPDKEQRKKCWDARDKYWECLDSQNIKDSSQK----PLACTNFRKIFEKSCPTQWVTH 314
           MSFPDK +RKKCW+ RD+YW+CL+    K SS      P  C + RK FE+SCP QWV H
Sbjct: 1   MSFPDKAERKKCWNNRDEYWKCLEEHAPKHSSTSGEKVPTPCQSLRKSFEQSCPGQWVKH 60

Query: 315 FDRKRDFNVFKEKMQKEGYEPIKDSQ*IC 401
           FDRKR ++ FKEKM  +GY+P++D    C
Sbjct: 61  FDRKRTYDQFKEKM-AQGYDPLEDLSDTC 88


>AE014298-2928|AAN09514.1|   77|Drosophila melanogaster CG14235-PC,
           isoform C protein.
          Length = 77

 Score = 34.7 bits (76), Expect = 0.076
 Identities = 16/64 (25%), Positives = 30/64 (46%)
 Frame = +3

Query: 153 FPDKEQRKKCWDARDKYWECLDSQNIKDSSQKPLACTNFRKIFEKSCPTQWVTHFDRKRD 332
           FP++   + C+ +   +  C   Q  +     P  C  F+K+++  CP  WV  +D +R+
Sbjct: 15  FPNQNVTRYCYQSYIDFHRC---QKKRGEDFAP--CNYFQKVYKSMCPNAWVEKWDDQRE 69

Query: 333 FNVF 344
              F
Sbjct: 70  SGTF 73


>AE014298-2927|AAN09513.1|   77|Drosophila melanogaster CG14235-PB,
           isoform B protein.
          Length = 77

 Score = 34.7 bits (76), Expect = 0.076
 Identities = 16/64 (25%), Positives = 30/64 (46%)
 Frame = +3

Query: 153 FPDKEQRKKCWDARDKYWECLDSQNIKDSSQKPLACTNFRKIFEKSCPTQWVTHFDRKRD 332
           FP++   + C+ +   +  C   Q  +     P  C  F+K+++  CP  WV  +D +R+
Sbjct: 15  FPNQNVTRYCYQSYIDFHRC---QKKRGEDFAP--CNYFQKVYKSMCPNAWVEKWDDQRE 69

Query: 333 FNVF 344
              F
Sbjct: 70  SGTF 73


>AE014298-2926|AAF49015.2|   96|Drosophila melanogaster CG14235-PA,
           isoform A protein.
          Length = 96

 Score = 34.7 bits (76), Expect = 0.076
 Identities = 16/64 (25%), Positives = 30/64 (46%)
 Frame = +3

Query: 153 FPDKEQRKKCWDARDKYWECLDSQNIKDSSQKPLACTNFRKIFEKSCPTQWVTHFDRKRD 332
           FP++   + C+ +   +  C   Q  +     P  C  F+K+++  CP  WV  +D +R+
Sbjct: 34  FPNQNVTRYCYQSYIDFHRC---QKKRGEDFAP--CNYFQKVYKSMCPNAWVEKWDDQRE 88

Query: 333 FNVF 344
              F
Sbjct: 89  SGTF 92


>X80028-1|CAA56332.1| 1126|Drosophila melanogaster dhem2 protein.
          Length = 1126

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
 Frame = +3

Query: 249 PLACTNFRKIFEKSCPTQWVTHFDRKRDF---NVFKEKMQKE 365
           PL C++F+    + CP +   H  R+R     N+F E+M KE
Sbjct: 570 PLICSHFQNCTHEMCPEE--RHHIRERSLSVVNIFLEEMAKE 609


>AY118579-1|AAM49948.1| 1126|Drosophila melanogaster LD43495p
           protein.
          Length = 1126

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
 Frame = +3

Query: 249 PLACTNFRKIFEKSCPTQWVTHFDRKRDF---NVFKEKMQKE 365
           PL C++F+    + CP +   H  R+R     N+F E+M KE
Sbjct: 570 PLICSHFQNCTHEMCPEE--RHHIRERSLSVVNIFLEEMAKE 609


>AE014296-3665|AAF51820.1| 1126|Drosophila melanogaster CG5837-PA
           protein.
          Length = 1126

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
 Frame = +3

Query: 249 PLACTNFRKIFEKSCPTQWVTHFDRKRDF---NVFKEKMQKE 365
           PL C++F+    + CP +   H  R+R     N+F E+M KE
Sbjct: 570 PLICSHFQNCTHEMCPEE--RHHIRERSLSVVNIFLEEMAKE 609


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,458,129
Number of Sequences: 53049
Number of extensions: 343877
Number of successful extensions: 646
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 643
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 645
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1908489216
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)