Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_F_O09
         (520 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z75714-9|CAN86912.1|   90|Caenorhabditis elegans Hypothetical pr...    65   3e-11
AF125459-5|AAD12844.1|  345|Caenorhabditis elegans Hypothetical ...    29   2.6  
U41991-9|AAA83349.1|  297|Caenorhabditis elegans Hypothetical pr...    28   3.5  
Z36948-1|CAA85409.1|  180|Caenorhabditis elegans Hypothetical pr...    27   6.1  
AF100655-2|AAK68684.2|  366|Caenorhabditis elegans Map kinase ac...    27   6.1  
AF100655-1|AAC68944.1|  443|Caenorhabditis elegans Map kinase ac...    27   6.1  

>Z75714-9|CAN86912.1|   90|Caenorhabditis elegans Hypothetical
           protein ZC434.7b protein.
          Length = 90

 Score = 64.9 bits (151), Expect = 3e-11
 Identities = 28/71 (39%), Positives = 44/71 (61%), Gaps = 2/71 (2%)
 Frame = +3

Query: 162 KEQRKKCWDARDKYWECLDSQNIKDSSQKPL--ACTNFRKIFEKSCPTQWVTHFDRKRDF 335
           K +R+KC++ARD+Y  C+D    +  S+K    +C + RK F+ +CPT WV HF RK  F
Sbjct: 9   KSERRKCYEARDQYAACIDKFLSQGKSEKEATNSCRSERKNFDGNCPTSWVNHFIRKDQF 68

Query: 336 NVFKEKMQKEG 368
             +K+ +  +G
Sbjct: 69  ERYKKTLAAQG 79


>AF125459-5|AAD12844.1|  345|Caenorhabditis elegans Hypothetical
           protein Y25C1A.8a protein.
          Length = 345

 Score = 28.7 bits (61), Expect = 2.6
 Identities = 12/39 (30%), Positives = 22/39 (56%)
 Frame = +3

Query: 159 DKEQRKKCWDARDKYWECLDSQNIKDSSQKPLACTNFRK 275
           D+EQ+++    +D  W C+DS+  K + +  L C  + K
Sbjct: 8   DREQKRRA--LKDGEWACVDSKCAKVNEESLLVCDEYGK 44


>U41991-9|AAA83349.1|  297|Caenorhabditis elegans Hypothetical
           protein C42D4.11 protein.
          Length = 297

 Score = 28.3 bits (60), Expect = 3.5
 Identities = 13/22 (59%), Positives = 13/22 (59%)
 Frame = +3

Query: 264 NFRKIFEKSCPTQWVTHFDRKR 329
           NF     KSCP QW  HFDR R
Sbjct: 119 NFSYSAMKSCPPQW-EHFDRAR 139


>Z36948-1|CAA85409.1|  180|Caenorhabditis elegans Hypothetical
           protein D2089.2 protein.
          Length = 180

 Score = 27.5 bits (58), Expect = 6.1
 Identities = 11/33 (33%), Positives = 14/33 (42%)
 Frame = +3

Query: 210 CLDSQNIKDSSQKPLACTNFRKIFEKSCPTQWV 308
           C D+    DS  KP +C+         C  QWV
Sbjct: 28  CFDNDTSSDSLIKPCSCSGTVAYVHNGCLEQWV 60


>AF100655-2|AAK68684.2|  366|Caenorhabditis elegans Map kinase
           activated protein kinaseprotein 2, isoform b protein.
          Length = 366

 Score = 27.5 bits (58), Expect = 6.1
 Identities = 17/64 (26%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
 Frame = +3

Query: 204 WECLDSQNIKDSSQKPLACTNFRKI-FEKSCPTQWVTHFDRKRDFNVFKEKMQKEGYEPI 380
           W+C+ S+  KD  +K L      +I  E++   +W++H+ R  D  +F      +  E  
Sbjct: 242 WDCV-SEAAKDLIRKLLRTEPTERITIEQTMEHKWISHYRRVPDTPLFTSSNLNDQREQW 300

Query: 381 KDSQ 392
            D Q
Sbjct: 301 TDMQ 304


>AF100655-1|AAC68944.1|  443|Caenorhabditis elegans Map kinase
           activated protein kinaseprotein 2, isoform a protein.
          Length = 443

 Score = 27.5 bits (58), Expect = 6.1
 Identities = 17/64 (26%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
 Frame = +3

Query: 204 WECLDSQNIKDSSQKPLACTNFRKI-FEKSCPTQWVTHFDRKRDFNVFKEKMQKEGYEPI 380
           W+C+ S+  KD  +K L      +I  E++   +W++H+ R  D  +F      +  E  
Sbjct: 319 WDCV-SEAAKDLIRKLLRTEPTERITIEQTMEHKWISHYRRVPDTPLFTSSNLNDQREQW 377

Query: 381 KDSQ 392
            D Q
Sbjct: 378 TDMQ 381


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,603,608
Number of Sequences: 27780
Number of extensions: 202632
Number of successful extensions: 496
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 490
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 495
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1007108110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)