Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_F_N24
         (680 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase protein.   244   6e-67
AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.   244   6e-67
DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GP...    24   1.2  
AJ555537-1|CAD88245.1|  210|Apis mellifera putative chemosensory...    23   3.6  
DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.           22   4.7  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          21   8.2  

>EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase protein.
          Length = 200

 Score =  244 bits (597), Expect = 6e-67
 Identities = 111/139 (79%), Positives = 122/139 (87%)
 Frame = +3

Query: 252 LPGEVFDSLKNKKTSFGSTLLDCIQSGVXNLDSGVGIYAPDAESYSVFAELFDPIIEDYH 431
           L  +VFD LK KKTSF STLLDCIQSG+ NLDSGVGIYAPDAE+Y++FA+LFDPIIEDYH
Sbjct: 14  LSKDVFDQLKTKKTSFDSTLLDCIQSGIENLDSGVGIYAPDAEAYTLFADLFDPIIEDYH 73

Query: 432 NGFKKTDKHPPKNWGDVDTLGNLXPAGEFVVSTRVRCGRSLEGYPFNPCLTEXQYKEMED 611
            GFKKTDKHPPK++GDVD+LGNL PA EF+VSTRVRCGRSLEGYPFNPCLTE QYKEME+
Sbjct: 74  GGFKKTDKHPPKDFGDVDSLGNLDPANEFIVSTRVRCGRSLEGYPFNPCLTEAQYKEMEE 133

Query: 612 KVSGTLSSLEGXLKALSTP 668
           KVS TLS LEG LK    P
Sbjct: 134 KVSSTLSGLEGELKGTFYP 152



 Score = 29.1 bits (62), Expect = 0.041
 Identities = 14/26 (53%), Positives = 18/26 (69%)
 Frame = +2

Query: 212 LQGSDSKSLLKKYLTRGSIRQPEEQK 289
           L  SDSKSLLKKYL++    Q + +K
Sbjct: 1   LSSSDSKSLLKKYLSKDVFDQLKTKK 26



 Score = 27.1 bits (57), Expect = 0.17
 Identities = 10/13 (76%), Positives = 11/13 (84%)
 Frame = +2

Query: 641 GRXQGTFYPLTGM 679
           G  +GTFYPLTGM
Sbjct: 144 GELKGTFYPLTGM 156


>AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.
          Length = 355

 Score =  244 bits (597), Expect = 6e-67
 Identities = 111/139 (79%), Positives = 122/139 (87%)
 Frame = +3

Query: 252 LPGEVFDSLKNKKTSFGSTLLDCIQSGVXNLDSGVGIYAPDAESYSVFAELFDPIIEDYH 431
           L  +VFD LK KKTSF STLLDCIQSG+ NLDSGVGIYAPDAE+Y++FA+LFDPIIEDYH
Sbjct: 30  LSKDVFDQLKTKKTSFDSTLLDCIQSGIENLDSGVGIYAPDAEAYTLFADLFDPIIEDYH 89

Query: 432 NGFKKTDKHPPKNWGDVDTLGNLXPAGEFVVSTRVRCGRSLEGYPFNPCLTEXQYKEMED 611
            GFKKTDKHPPK++GDVD+LGNL PA EF+VSTRVRCGRSLEGYPFNPCLTE QYKEME+
Sbjct: 90  GGFKKTDKHPPKDFGDVDSLGNLDPANEFIVSTRVRCGRSLEGYPFNPCLTEAQYKEMEE 149

Query: 612 KVSGTLSSLEGXLKALSTP 668
           KVS TLS LEG LK    P
Sbjct: 150 KVSSTLSGLEGELKGTFYP 168



 Score = 52.8 bits (121), Expect = 3e-09
 Identities = 26/42 (61%), Positives = 31/42 (73%)
 Frame = +2

Query: 164 MVDAATLEKLEAGFSKLQGSDSKSLLKKYLTRGSIRQPEEQK 289
           MVD A L+KLE GFSKL  SDSKSLLKKYL++    Q + +K
Sbjct: 1   MVDQAVLDKLETGFSKLSSSDSKSLLKKYLSKDVFDQLKTKK 42



 Score = 27.1 bits (57), Expect = 0.17
 Identities = 10/13 (76%), Positives = 11/13 (84%)
 Frame = +2

Query: 641 GRXQGTFYPLTGM 679
           G  +GTFYPLTGM
Sbjct: 160 GELKGTFYPLTGM 172


>DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GPCR
           protein.
          Length = 381

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = -2

Query: 121 CSTRTVGYRNMITPQDRLC 65
           C TR +G R+ +T + ++C
Sbjct: 345 CKTRIIGRRSWVTRESQIC 363


>AJ555537-1|CAD88245.1|  210|Apis mellifera putative chemosensory
           receptor 2 protein.
          Length = 210

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +2

Query: 260 GSIRQPEEQKDLIRIHPP 313
           GS  QP+EQ+ L  + PP
Sbjct: 33  GSAEQPKEQEPLPPVTPP 50


>DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.
          Length = 552

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = -1

Query: 104 RIQEYDHTPGSVVLRN 57
           R ++Y H+ GSV+ RN
Sbjct: 429 RAKDYGHSSGSVIDRN 444


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 8/19 (42%), Positives = 9/19 (47%)
 Frame = +2

Query: 416 HRGLPQWLQEDRQAPAQEL 472
           H G   W QED  A  + L
Sbjct: 405 HHGSKSWTQEDMDAALEAL 423


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,945
Number of Sequences: 438
Number of extensions: 3500
Number of successful extensions: 14
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20708550
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)