Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_F_N21
         (776 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578798-1|AAT07303.1|  356|Anopheles gambiae baboon protein.          25   2.6  
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    24   4.6  
AJ302658-1|CAC35523.1|  145|Anopheles gambiae gSG7 protein protein.    24   6.0  
AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein ...    23   8.0  

>AY578798-1|AAT07303.1|  356|Anopheles gambiae baboon protein.
          Length = 356

 Score = 25.0 bits (52), Expect = 2.6
 Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
 Frame = +2

Query: 65  EYHENSSLFKXTLP*FINVEIQIEILCIIMSTPTAYEH-DADGSKFIPATQRPD 223
           +YHEN SLF       ++ +  +E +   ++T  A+ H D  G++  PA    D
Sbjct: 135 DYHENGSLFDFLTARCVDPDTMLE-MAFSIATGLAHLHMDIVGTRGKPAIAHRD 187


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
            channel alpha subunitprotein.
          Length = 2139

 Score = 24.2 bits (50), Expect = 4.6
 Identities = 13/38 (34%), Positives = 19/38 (50%)
 Frame = +2

Query: 608  LEEKIKAGLLKSPDKDQKEKMSKKNEILNEIDILXNSI 721
            LE  I  G+  +   D K K  K  +I+N   ++ NSI
Sbjct: 1129 LEVAIGDGMEFTIHGDLKNKAKKNKQIMNNSKVIGNSI 1166


>AJ302658-1|CAC35523.1|  145|Anopheles gambiae gSG7 protein protein.
          Length = 145

 Score = 23.8 bits (49), Expect = 6.0
 Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 7/78 (8%)
 Frame = +2

Query: 119 VEIQIEILCIIMSTPT--AYEHDADGSK-FIPATQRPDGTWRKP---RRIKEGYVPQEEV 280
           V I + ++C++ +TPT  +  H     K F   TQ  D T +KP   +R K G   Q   
Sbjct: 8   VLIALGVICLLQTTPTSASTNHVQQLMKVFRSMTQNFDYT-KKPSYLQRAKYGVQNQLRN 66

Query: 281 PLYESKGKQFR-ARQNDG 331
           PL +  G   + A+ +DG
Sbjct: 67  PLVQKAGNLPKSAKLSDG 84


>AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein
           protein.
          Length = 699

 Score = 23.4 bits (48), Expect = 8.0
 Identities = 11/49 (22%), Positives = 25/49 (51%)
 Frame = +2

Query: 11  MIFICQNSFLCESWFDCVEYHENSSLFKXTLP*FINVEIQIEILCIIMS 157
           +  +C N  + + +   V+Y + S LF   +  F  V +++  L +++S
Sbjct: 272 LAIVCMNLVVPQLFNYLVQYEKYSPLFVIKISLFRTVFLRLSSLAVLLS 320


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 629,546
Number of Sequences: 2352
Number of extensions: 10878
Number of successful extensions: 24
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 81081585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)