Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_F_N21
         (776 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z30423-7|CAA83010.2|  164|Caenorhabditis elegans Hypothetical pr...    69   3e-12
U29488-2|AAA68774.2|  422|Caenorhabditis elegans Hypothetical pr...    29   2.8  
Z73102-12|CAA97406.1|  430|Caenorhabditis elegans Hypothetical p...    28   8.6  

>Z30423-7|CAA83010.2|  164|Caenorhabditis elegans Hypothetical
           protein T20G5.9 protein.
          Length = 164

 Score = 69.3 bits (162), Expect = 3e-12
 Identities = 29/66 (43%), Positives = 40/66 (60%)
 Frame = +2

Query: 185 DGSKFIPATQRPDGTWRKPRRIKEGYVPQEEVPLYESKGKQFRARQNDGLPVGLTPEIVA 364
           +G  FI ATQR DGTWRK RR+K GY+PQ+E P Y++K +         +P G+ P  +A
Sbjct: 26  NGETFITATQRADGTWRKARRVKGGYIPQDEQPKYQNKMQLEATNGRSSVPAGVNPRAMA 85

Query: 365 QAQKKK 382
               +K
Sbjct: 86  SGSSRK 91


>U29488-2|AAA68774.2|  422|Caenorhabditis elegans Hypothetical
           protein C56C10.6 protein.
          Length = 422

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 5/66 (7%)
 Frame = +2

Query: 494 EIQEPTVPSQSVPTESISQSDPTXXXXXXXXXXXEIEFLEEK-----IKAGLLKSPDKDQ 658
           E+   T PS+S P++S+++S              E    +EK     IK     S +KD 
Sbjct: 308 EMPISTTPSKSTPSKSVTKSPAQLSKETVKKASREKTLSKEKTSKEDIKTARKTSIEKDV 367

Query: 659 KEKMSK 676
           KEK+SK
Sbjct: 368 KEKLSK 373


>Z73102-12|CAA97406.1|  430|Caenorhabditis elegans Hypothetical
           protein B0035.11 protein.
          Length = 430

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 12/21 (57%), Positives = 15/21 (71%)
 Frame = +2

Query: 641 SPDKDQKEKMSKKNEILNEID 703
           SPD  +K++ SKK  ILNE D
Sbjct: 28  SPDSPKKQEPSKKRAILNESD 48


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,054,991
Number of Sequences: 27780
Number of extensions: 256737
Number of successful extensions: 828
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 795
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 828
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1872168044
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)