Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_F_N20
         (695 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_01_0189 + 1397068-1397241,1397713-1397804,1398456-1398546,139...    29   3.5  
12_01_0184 + 1359376-1359564,1359720-1359774,1360552-1360748,136...    29   4.7  
11_01_0188 + 1486070-1486156,1486632-1486686,1487337-1487533,148...    29   4.7  
11_01_0185 + 1455635-1455817,1455997-1456051,1456415-1456611,145...    29   4.7  
08_02_0126 + 12835431-12838183,12838471-12838566,12838920-128389...    28   8.1  
07_01_1079 + 9770444-9772756                                           28   8.1  
04_03_0158 + 12078985-12079211,12079306-12079423,12079703-120797...    28   8.1  

>12_01_0189 +
           1397068-1397241,1397713-1397804,1398456-1398546,
           1398931-1399052,1399142-1399289,1399596-1399665,
           1400465-1400517,1400678-1400822,1401308-1401426,
           1401480-1401527,1401528-1401599,1401902-1402024,
           1402025-1402131,1402437-1402547,1402585-1402777,
           1402959-1403129,1403548-1403673
          Length = 654

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 13/30 (43%), Positives = 16/30 (53%)
 Frame = +1

Query: 253 SMLEKKSLLCTGCPIKGVGIYIKSKCGSNI 342
           S+  +  +LC  CP  GVGIY     G NI
Sbjct: 92  SVALRMEILCENCPAGGVGIYNPGFWGMNI 121


>12_01_0184 +
           1359376-1359564,1359720-1359774,1360552-1360748,
           1360998-1361119,1361205-1361352,1361501-1361570,
           1361675-1361820,1362021-1362113,1362675-1362819,
           1363523-1363704,1363748-1363819,1364174-1364277,
           1364417-1364473,1364560-1364746,1364836-1364979,
           1365092-1365214
          Length = 677

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 12/28 (42%), Positives = 15/28 (53%)
 Frame = +1

Query: 265 KKSLLCTGCPIKGVGIYIKSKCGSNINN 348
           +  +LC  CP  GVGIY     G NI +
Sbjct: 124 RMEVLCDNCPAGGVGIYNPGFWGMNIED 151


>11_01_0188 +
           1486070-1486156,1486632-1486686,1487337-1487533,
           1487889-1488010,1488095-1488242,1488673-1488742,
           1489714-1489766,1489922-1490066,1490542-1490660,
           1490776-1490847,1491277-1491383,1491696-1491752,
           1491844-1492036,1492225-1492368,1492687-1492812
          Length = 564

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = +1

Query: 265 KKSLLCTGCPIKGVGIYIKSKCGSNI 342
           +  +LC  CP  GVGIY     G NI
Sbjct: 90  RMEILCDNCPAGGVGIYNPGFWGMNI 115


>11_01_0185 +
           1455635-1455817,1455997-1456051,1456415-1456611,
           1456850-1457206,1457355-1457424,1457527-1457672,
           1457786-1457831,1457910-1457962,1458507-1458651,
           1459268-1459386,1459494-1459565,1459872-1459975,
           1460117-1460173,1460260-1460452,1460535-1460678,
           1460825-1460927,1461444-1461592,1462674-1462728,
           1464037-1464227,1464580-1464701,1464831-1464978,
           1465354-1465423,1465499-1465644,1466097-1466247,
           1466614-1466732,1466807-1466848,1466849-1466961,
           1467496-1467552,1467642-1467834,1468040-1468183,
           1468567-1468665
          Length = 1280

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 12/28 (42%), Positives = 15/28 (53%)
 Frame = +1

Query: 265 KKSLLCTGCPIKGVGIYIKSKCGSNINN 348
           +  +LC  CP  GVGIY     G NI +
Sbjct: 122 RMEVLCDNCPAGGVGIYNPGFWGMNIED 149


>08_02_0126 +
           12835431-12838183,12838471-12838566,12838920-12838971,
           12839198-12839298,12839349-12839370
          Length = 1007

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 10/26 (38%), Positives = 17/26 (65%)
 Frame = +2

Query: 563 IEFVHLVSNNEYNPITDMYSILTRES 640
           +EF+H++    Y P   +Y+IL RE+
Sbjct: 889 MEFLHIMETRRYMPSFHIYTILAREA 914


>07_01_1079 + 9770444-9772756
          Length = 770

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = -2

Query: 295 WDTLYTRGFSFPTYFSRAMRIQNYIHT 215
           +D LYT+   FP   S   R QNY++T
Sbjct: 262 FDLLYTKEKMFPIILSALKRQQNYVNT 288


>04_03_0158 +
           12078985-12079211,12079306-12079423,12079703-12079783,
           12080787-12081062
          Length = 233

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 10/29 (34%), Positives = 19/29 (65%)
 Frame = +1

Query: 139 ILNMIELKLNIGNIEDVLDACGTNFKYVC 225
           ++ +++ ++ I  I DVL+    NF+YVC
Sbjct: 109 VVFLLDQRMEIPEISDVLEISFPNFRYVC 137


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,805,472
Number of Sequences: 37544
Number of extensions: 236656
Number of successful extensions: 478
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 470
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 478
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1780264028
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)