Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_F_N17
         (672 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_08_0790 + 20586222-20586310,20586718-20586783,20588149-205883...    29   2.6  
05_05_0005 + 21442819-21442916,21443053-21443119,21443226-214432...    29   4.5  

>10_08_0790 +
           20586222-20586310,20586718-20586783,20588149-20588350,
           20588491-20588548,20588850-20589052,20589147-20589204,
           20589473-20589579
          Length = 260

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
 Frame = -1

Query: 516 KHSHWQQLSLIQMYE-YPILNV-DLQL-DLAR*CYILCSNNHCHG 391
           K   W +  +I+ +E Y   NV D +L DL+R C I     HCHG
Sbjct: 186 KGIEWMREEVIEAFETYSNANVVDYELEDLSRQCLIFDDCGHCHG 230


>05_05_0005 +
           21442819-21442916,21443053-21443119,21443226-21443291,
           21443368-21443414,21443480-21443543,21443627-21443707,
           21443781-21443823,21443912-21443961,21444262-21444343,
           21445045-21445120,21445451-21445558,21445782-21445833,
           21445911-21446570,21446652-21448067
          Length = 969

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 14/60 (23%), Positives = 29/60 (48%)
 Frame = -1

Query: 546 IDISRLKPLYKHSHWQQLSLIQMYEYPILNVDLQLDLAR*CYILCSNNHCHGGFVSNFLH 367
           I ++R     + S  Q+++LI   ++P +    +  + + CY+     +C GG +  F H
Sbjct: 39  IRLARQTERCRKSAHQEMALIARLQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDIFLFYH 98


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,213,862
Number of Sequences: 37544
Number of extensions: 357259
Number of successful extensions: 768
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 748
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 768
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1703141568
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)