Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P05_F_N16
(744 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC777.10c |ubc12||ubiquitin conjugating enzyme Ubc12|Schizosac... 118 7e-28
SPBC1105.09 |ubc15||ubiquitin conjugating enzyme Ubc15|Schizosac... 88 1e-18
SPBC119.02 |ubc4||ubiquitin conjugating enzyme Ubc4|Schizosaccha... 83 4e-17
SPAC11E3.04c |ubc13|spu13|ubiquitin conjugating enzyme Ubc13|Sch... 81 1e-16
SPAC30D11.13 |hus5|ubc9|SUMO conjugating enzyme Hus5|Schizosacch... 79 5e-16
SPCC1259.15c |ubc11|ubcdp, ubcp4|ubiquitin conjugating enzyme E2... 79 7e-16
SPAC1250.03 |ubc14||ubiquitin conjugating enzyme Ubc14|Schizosac... 79 7e-16
SPAC18B11.07c |rhp6|ubc2|Rad6 homolog, ubiquitin conjugating enz... 73 6e-14
SPBP16F5.04 |ubc3|ubcp3|ubiquitin conjugating enzyme Ubc3|Schizo... 61 2e-10
SPBC211.07c |ubc8||ubiquitin conjugating enzyme Ubc8|Schizosacch... 57 3e-09
SPBC1198.09 |ubc16||ubiquitin conjugating enzyme Ubc16|Schizosac... 55 1e-08
SPBC2D10.20 |ubc1||ubiquitin conjugating enzyme Ubc1|Schizosacch... 52 7e-08
SPAC10F6.05c |ubc6||ubiquitin conjugating enzyme Ubc6|Schizosacc... 42 7e-05
SPBC30D10.11 |gpi1||pig-Q|Schizosaccharomyces pombe|chr 2|||Manual 29 0.92
SPBC12D12.04c |pck2|sts6, pkc1|protein kinase C |Schizosaccharom... 28 1.6
SPBC25D12.04 |suc22||ribonucleotide reductase small subunit Suc2... 27 2.1
SPBP35G2.14 |||RNA-binding protein|Schizosaccharomyces pombe|chr... 27 3.7
SPCC970.07c |raf2|dos2, cmc2, clr7|Rik1-associated factor Raf2|S... 26 6.5
SPAC24C9.11 |||MIF4G/MA4 domain protein|Schizosaccharomyces pomb... 25 8.6
>SPCC777.10c |ubc12||ubiquitin conjugating enzyme
Ubc12|Schizosaccharomyces pombe|chr 3|||Manual
Length = 177
Score = 118 bits (285), Expect = 7e-28
Identities = 61/145 (42%), Positives = 89/145 (61%)
Frame = +1
Query: 241 KEVQEMEENLPATCSVKFEDPNLLSEFILTVAPDEGYWKGGKFKFSVIITEEYNMAPPRV 420
K+V ++E +P+T S + DP L+ L + PDEGY+KGGKFKF + I + Y PP+V
Sbjct: 30 KDVTDLE--IPSTMSTSWPDPIKLNVLHLEIRPDEGYYKGGKFKFRIQIDDNYPHDPPKV 87
Query: 421 KCLTKLWHPNINVDGDICLSLLRQTSIDEHGWAPTRRLKDVVWGLNSLFTDLLNFDDPLN 600
KCL K++HPNI+++G++CL++LRQ W P L ++ GL LF N +DPLN
Sbjct: 88 KCLNKIYHPNIDIEGNVCLNILRQ------DWNPVLNLNSILVGLQFLFLS-PNAEDPLN 140
Query: 601 IEAAEMYNKDKVQFQVKVQEYISKG 675
EAA +KD F +V+ + G
Sbjct: 141 KEAAADLHKDPQGFASRVRTAMKGG 165
>SPBC1105.09 |ubc15||ubiquitin conjugating enzyme
Ubc15|Schizosaccharomyces pombe|chr 2|||Manual
Length = 167
Score = 88.2 bits (209), Expect = 1e-18
Identities = 41/160 (25%), Positives = 94/160 (58%), Gaps = 8/160 (5%)
Frame = +1
Query: 217 SIRDKLLVKEVQEMEENLPATCSVKFEDPNLLSEF-ILTVAPDEGYWKGGKFKFSVIITE 393
S ++LL K+++E+++N P SV D + E+ ++ + P++ ++GG F ++ +
Sbjct: 4 SASEQLLRKQLKEIQKNPPQGFSVGLVDDKSIFEWEVMIIGPEDTLYEGGFFHATLSFPQ 63
Query: 394 EYNMAPPRVKCLTKLWHPNINVDGDICLSLLRQTSIDEHG-------WAPTRRLKDVVWG 552
+Y + PP++K T++WHPN++ +G++C+S+L D++G W P + ++
Sbjct: 64 DYPLMPPKMKFTTEIWHPNVHPNGEVCISILHPPGDDKYGYEDAGERWLPVHSPETILIS 123
Query: 553 LNSLFTDLLNFDDPLNIEAAEMYNKDKVQFQVKVQEYISK 672
+ S+ + N + P NI+AA+ + ++ +F+ +V+ + +
Sbjct: 124 VISMLSS-PNDESPANIDAAKEFRENPQEFKKRVRRLVRR 162
>SPBC119.02 |ubc4||ubiquitin conjugating enzyme
Ubc4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 147
Score = 83.0 bits (196), Expect = 4e-17
Identities = 45/148 (30%), Positives = 78/148 (52%)
Frame = +1
Query: 229 KLLVKEVQEMEENLPATCSVKFEDPNLLSEFILTVAPDEGYWKGGKFKFSVIITEEYNMA 408
K + +E+ ++ ++ P++CS +L + P + + GG F S+ +Y
Sbjct: 4 KRINRELADLGKDPPSSCSAGPVGDDLFHWQATIMGPADSPYAGGVFFLSIHFPTDYPFK 63
Query: 409 PPRVKCLTKLWHPNINVDGDICLSLLRQTSIDEHGWAPTRRLKDVVWGLNSLFTDLLNFD 588
PP+V T+++HPNIN +G ICL +LR W+P + V+ + SL TD N D
Sbjct: 64 PPKVNFTTRIYHPNINSNGSICLDILRDQ------WSPALTISKVLLSICSLLTD-PNPD 116
Query: 589 DPLNIEAAEMYNKDKVQFQVKVQEYISK 672
DPL E A +Y D+ ++++ +E+ K
Sbjct: 117 DPLVPEIAHVYKTDRSRYELSAREWTRK 144
>SPAC11E3.04c |ubc13|spu13|ubiquitin conjugating enzyme
Ubc13|Schizosaccharomyces pombe|chr 1|||Manual
Length = 148
Score = 81.4 bits (192), Expect = 1e-16
Identities = 43/148 (29%), Positives = 80/148 (54%)
Frame = +1
Query: 229 KLLVKEVQEMEENLPATCSVKFEDPNLLSEFILTVAPDEGYWKGGKFKFSVIITEEYNMA 408
K ++KE++ + + P + NL I P + ++GGKF + + +EY M
Sbjct: 5 KRIIKEIETLTRDPPPGIVAAPTEDNLRYFKITMEGPQQSAYEGGKFHLELFLPDEYPMM 64
Query: 409 PPRVKCLTKLWHPNINVDGDICLSLLRQTSIDEHGWAPTRRLKDVVWGLNSLFTDLLNFD 588
PP V+ LTK++HPN++ G ICLS L++ W+P +++ V+ + +L N D
Sbjct: 65 PPNVRFLTKIYHPNVDKLGRICLSTLKK------DWSPALQIRTVLLSIQALM-GAPNPD 117
Query: 589 DPLNIEAAEMYNKDKVQFQVKVQEYISK 672
DPL+ + A+++ +++ Q +E+ K
Sbjct: 118 DPLDNDVAKIWKENEPQAIANAREWTKK 145
>SPAC30D11.13 |hus5|ubc9|SUMO conjugating enzyme
Hus5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 157
Score = 79.4 bits (187), Expect = 5e-16
Identities = 36/102 (35%), Positives = 57/102 (55%)
Frame = +1
Query: 352 WKGGKFKFSVIITEEYNMAPPRVKCLTKLWHPNINVDGDICLSLLRQTSIDEHGWAPTRR 531
W+GG +K ++ EEY PP+ + L+HPN+ G +CLS+L +E GW P
Sbjct: 53 WEGGLYKLTMAFPEEYPTRPPKCRFTPPLFHPNVYPSGTVCLSILN----EEEGWKPAIT 108
Query: 532 LKDVVWGLNSLFTDLLNFDDPLNIEAAEMYNKDKVQFQVKVQ 657
+K ++ G+ L D N P EA M+ KDKV+++ +V+
Sbjct: 109 IKQILLGIQDLLDD-PNIASPAQTEAYTMFKKDKVEYEKRVR 149
>SPCC1259.15c |ubc11|ubcdp, ubcp4|ubiquitin conjugating enzyme E2-C
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 176
Score = 79.0 bits (186), Expect = 7e-16
Identities = 43/150 (28%), Positives = 78/150 (52%), Gaps = 1/150 (0%)
Frame = +1
Query: 217 SIRDKLLVKEVQEMEENLPATCSVKFEDPNLLSEFILTVAPDEGYWKGGKFKFSVIITEE 396
S+ +L + + M N P + D NLL P + Y++G KFK S+
Sbjct: 28 SVTKRLRSELMSLMMSNTPGISAFPDSDSNLLHWAGTITGPSDTYYEGLKFKISMSFPAN 87
Query: 397 YNMAPPRVKCLTKLWHPNINVDGDICLSLLRQTSIDEHGWAPTRRLKDVVWGLNSLFTDL 576
Y +PP + + +WHPN+++ G+ICL +L+ W+ ++ ++ L SL +
Sbjct: 88 YPYSPPTIIFTSPMWHPNVDMSGNICLDILKDK------WSAVYNVQTILLSLQSLLGE- 140
Query: 577 LNFDDPLNIEAAEMYNKDKVQF-QVKVQEY 663
N PLN +AAE+++KD +++ ++ +Q Y
Sbjct: 141 PNNASPLNAQAAELWSKDPIEYKRLLMQRY 170
>SPAC1250.03 |ubc14||ubiquitin conjugating enzyme
Ubc14|Schizosaccharomyces pombe|chr 1|||Manual
Length = 155
Score = 79.0 bits (186), Expect = 7e-16
Identities = 42/146 (28%), Positives = 74/146 (50%)
Frame = +1
Query: 235 LVKEVQEMEENLPATCSVKFEDPNLLSEFILTVAPDEGYWKGGKFKFSVIITEEYNMAPP 414
L KE ++ E+ V D NL + P + + GGKF FS+ +Y PP
Sbjct: 12 LTKEYSDLREHPIPDIRVNLVDDNLFHWACTALGPSDSVYAGGKFHFSLKFPLDYPFQPP 71
Query: 415 RVKCLTKLWHPNINVDGDICLSLLRQTSIDEHGWAPTRRLKDVVWGLNSLFTDLLNFDDP 594
++ T+++HPN + +G++CL++L+Q + P+ +L+ V+ + L + N DDP
Sbjct: 72 TIEFTTRIYHPNFDSEGNVCLAILKQ-----QVFKPSIKLRSVLEQILQLLRE-PNPDDP 125
Query: 595 LNIEAAEMYNKDKVQFQVKVQEYISK 672
L AE Y D+ F ++Y+ +
Sbjct: 126 LVASIAEQYRNDRPSFDKIARDYVEQ 151
>SPAC18B11.07c |rhp6|ubc2|Rad6 homolog, ubiquitin conjugating enzyme
E2 Rhp6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 151
Score = 72.5 bits (170), Expect = 6e-14
Identities = 37/144 (25%), Positives = 80/144 (55%)
Frame = +1
Query: 235 LVKEVQEMEENLPATCSVKFEDPNLLSEFILTVAPDEGYWKGGKFKFSVIITEEYNMAPP 414
L+++ + M+++ PA S N++ + + P + ++ G FK + E+Y PP
Sbjct: 9 LMRDFKRMQQDPPAGVSASPVSDNVMLWNAVIIGPADTPFEDGTFKLVLSFDEQYPNKPP 68
Query: 415 RVKCLTKLWHPNINVDGDICLSLLRQTSIDEHGWAPTRRLKDVVWGLNSLFTDLLNFDDP 594
VK ++ ++HPN+ +G++CL +L ++ W+PT + ++ + SL D N P
Sbjct: 69 LVKFVSTMFHPNVYANGELCLDIL------QNRWSPTYDVAAILTSIQSLLND-PNNASP 121
Query: 595 LNIEAAEMYNKDKVQFQVKVQEYI 666
N EAA+++ ++K ++ +V++ +
Sbjct: 122 ANAEAAQLHRENKKEYVRRVRKTV 145
>SPBP16F5.04 |ubc3|ubcp3|ubiquitin conjugating enzyme
Ubc3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 166
Score = 60.9 bits (141), Expect = 2e-10
Identities = 37/145 (25%), Positives = 73/145 (50%), Gaps = 9/145 (6%)
Frame = +1
Query: 235 LVKEVQEMEENLP--ATCSVKFEDPNLLSEFILTVAPDEGYWKGGKFKFSVIITEEYNMA 408
L+KE +E+ EN P T ED + + L PD ++GG + ++ +Y +
Sbjct: 10 LMKEYKELTENGPDGITAGPSNED-DFFTWDCLIQGPDGTPFEGGLYPATLKFPSDYPLG 68
Query: 409 PPRVKCLTKLWHPNINVDGDICLSLLRQTSID-------EHGWAPTRRLKDVVWGLNSLF 567
PP +K + +HPN+ DG +C+S+L D W+P + ++ ++ + S+
Sbjct: 69 PPTLKFECEFFHPNVYKDGTVCISILHAPGDDPNMYESSSERWSPVQSVEKILLSVMSML 128
Query: 568 TDLLNFDDPLNIEAAEMYNKDKVQF 642
+ N + NI+A +M+ +D+ ++
Sbjct: 129 AE-PNDESGANIDACKMWREDREEY 152
>SPBC211.07c |ubc8||ubiquitin conjugating enzyme
Ubc8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 184
Score = 56.8 bits (131), Expect = 3e-09
Identities = 34/130 (26%), Positives = 63/130 (48%), Gaps = 1/130 (0%)
Frame = +1
Query: 286 VKFEDPNLLSEFILTVAPDEGYWKGGKFKFSVIITEEYNMAPPRVKCLTKLWHPNIN-VD 462
V + N+ ++ P E + GG +K V + EY P + + +++HPNI+ +
Sbjct: 22 VTLVNDNMQEFYVRFHGPSETPYSGGIWKVHVELPSEYPWKSPSIGFVNRIFHPNIDELS 81
Query: 463 GDICLSLLRQTSIDEHGWAPTRRLKDVVWGLNSLFTDLLNFDDPLNIEAAEMYNKDKVQF 642
G +CL ++ QT W+P + ++ N DPLN EAA + ++ +
Sbjct: 82 GSVCLDVINQT------WSPMFDMINIFEVFLPQLLRYPNASDPLNGEAAALLLREPNTY 135
Query: 643 QVKVQEYISK 672
KV++YI++
Sbjct: 136 YAKVRDYIAR 145
>SPBC1198.09 |ubc16||ubiquitin conjugating enzyme
Ubc16|Schizosaccharomyces pombe|chr 2|||Manual
Length = 160
Score = 54.8 bits (126), Expect = 1e-08
Identities = 36/119 (30%), Positives = 66/119 (55%), Gaps = 5/119 (4%)
Frame = +1
Query: 337 PDEGYWKGGKFKFSVIITEEYNMAPPRVKCLTKLWHPNIN-VDGDICLSLLRQTSIDEHG 513
P E ++GG++ + + E Y ++PP V TK+ HPNI+ +G++C+ +L+ H
Sbjct: 44 PTETPYEGGQWVLDIHVHEGYPISPPSVYFQTKIVHPNISWTNGEVCMDILK-----TH- 97
Query: 514 WAPTRRLKDVVWGLNSLFTDLLNFDDPLNIEAAEMYNK-DKVQFQ--VKVQEYI-SKGK 678
W+P L+ + SL ++ + PLN++AA++ DK + V+ Y+ +KGK
Sbjct: 98 WSPAWSLQSACLAIISLLSN-YDASSPLNVDAAKLLRTGDKTAYNSLVRCTTYLYAKGK 155
>SPBC2D10.20 |ubc1||ubiquitin conjugating enzyme
Ubc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 217
Score = 52.4 bits (120), Expect = 7e-08
Identities = 36/150 (24%), Positives = 73/150 (48%), Gaps = 1/150 (0%)
Frame = +1
Query: 223 RDKLLVKEVQEMEENLPATCSVKFEDPNLLSEFILTVAPDEGYWKGGKFKFSVIITEEYN 402
R + + KE+ +++++ A V + ++ + P+ ++GG F + I +Y
Sbjct: 5 RSRRIAKELADVQQDKQAGIQVWTINDDISHLKGMFRGPEGTPYEGGYFVVDIEIPIDYP 64
Query: 403 MAPPRVKCLTKLWHPNINVD-GDICLSLLRQTSIDEHGWAPTRRLKDVVWGLNSLFTDLL 579
PP++ TK++HPN++ G ICL +L+ W+P +K + L SL
Sbjct: 65 FRPPKMNFDTKIYHPNVSSQTGAICLDILKDQ------WSPVYTMKSALISLQSLLC-TP 117
Query: 580 NFDDPLNIEAAEMYNKDKVQFQVKVQEYIS 669
+P + + A++Y ++ QF +E+ S
Sbjct: 118 EPSNPQDAQVAQVYLQNYQQFVRTAREWTS 147
>SPAC10F6.05c |ubc6||ubiquitin conjugating enzyme
Ubc6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 227
Score = 42.3 bits (95), Expect = 7e-05
Identities = 36/143 (25%), Positives = 63/143 (44%), Gaps = 3/143 (2%)
Frame = +1
Query: 229 KLLVKEVQEMEENLPATCSVKFEDPNLLS-EFILTVAPDEGYWKGGKFKFSVIITEEYNM 405
K L+KE +++N K N+L +I+T PD Y +GG++ ++I +Y
Sbjct: 8 KRLMKEYLALQKNPVELVDAKPATENILEWHYIITGPPDTPY-EGGQYHGTLIFPPDYPF 66
Query: 406 APPRVKCLTKLWHPNINVDGDICLSLLRQTSIDEHGWAPTRRLKDVVWGLNSLFT-DLLN 582
PP ++ +T N +CLS + W P+ + ++ GL S T D +
Sbjct: 67 KPPAIRMITPSGRFQTNT--RLCLSF---SDFHPKSWNPSWMVSTILVGLVSFMTSDEIT 121
Query: 583 FDDPLNIEAA-EMYNKDKVQFQV 648
+ E+ Y KD +F +
Sbjct: 122 TGGIVTSESTRRTYAKDTKRFNI 144
>SPBC30D10.11 |gpi1||pig-Q|Schizosaccharomyces pombe|chr 2|||Manual
Length = 653
Score = 28.7 bits (61), Expect = 0.92
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = -2
Query: 617 ISAASMFNGSSKLSRSVKSEFKPHTTSLSLLVG 519
+S SMF KL+R + S + TT +SLLVG
Sbjct: 579 MSLGSMFEHYRKLARRLISHYLSKTTLISLLVG 611
>SPBC12D12.04c |pck2|sts6, pkc1|protein kinase C
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1016
Score = 27.9 bits (59), Expect = 1.6
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +1
Query: 571 DLLNFDDPLNIEAAEMYNKDKVQFQVKVQEYISKG 675
DLLN+D PL I + +++F++ V+E KG
Sbjct: 108 DLLNYDTPLTISKIS-FLLQQLEFKLSVEEQYRKG 141
>SPBC25D12.04 |suc22||ribonucleotide reductase small subunit Suc22
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 391
Score = 27.5 bits (58), Expect = 2.1
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = -3
Query: 742 TFSXELIRTEVGCSTV*TCFIFSPLKYIP 656
TFS ELI + G T C +FS LK+ P
Sbjct: 253 TFSNELICRDEGLHTDFACLMFSHLKHRP 281
>SPBP35G2.14 |||RNA-binding protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1060
Score = 26.6 bits (56), Expect = 3.7
Identities = 19/49 (38%), Positives = 27/49 (55%)
Frame = -2
Query: 380 TLNLNLPPFQYPSSGATVNMNSLSRFGSSNFTLQVAGRFSSISCTSFTN 234
TL N PPF YP + ++ N+ S SS F L A S+ + TSF++
Sbjct: 266 TLGYNTPPFGYPPTTSSALPNA-SGSSSSFFGLPTA--VSASAGTSFSD 311
>SPCC970.07c |raf2|dos2, cmc2, clr7|Rik1-associated factor
Raf2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 636
Score = 25.8 bits (54), Expect = 6.5
Identities = 15/48 (31%), Positives = 25/48 (52%)
Frame = +1
Query: 526 RRLKDVVWGLNSLFTDLLNFDDPLNIEAAEMYNKDKVQFQVKVQEYIS 669
+R + + LN ++ L DP NIE+ ++ + +V K Q YIS
Sbjct: 262 KRTSPLRFPLNDIWLSGLRIVDP-NIESISLWKRIQVSTSPKHQRYIS 308
>SPAC24C9.11 |||MIF4G/MA4 domain protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 775
Score = 25.4 bits (53), Expect = 8.6
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 5/42 (11%)
Frame = +1
Query: 214 ISIRDKLLVKEVQEMEEN-----LPATCSVKFEDPNLLSEFI 324
IS+R K +V+ + ++EN A+ KFE N L +F+
Sbjct: 445 ISVRTKFMVESITNLKENKKTKVANASAQSKFEAVNQLKKFL 486
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,779,096
Number of Sequences: 5004
Number of extensions: 54902
Number of successful extensions: 156
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 149
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 151
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 353266144
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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