Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P05_F_N16
(744 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_02_0151 + 5895708-5895736,5896291-5896403,5897956-5898064,589... 116 2e-26
09_02_0429 + 9306862-9306970,9307834-9307942,9308538-9308616,930... 112 2e-25
08_02_0468 - 17505905-17506002,17506295-17506424,17506662-175067... 111 4e-25
03_06_0260 - 32717142-32717270,32717743-32717831,32717950-327180... 89 5e-18
01_06_1150 + 34910941-34911010,34911611-34911738,34912025-349121... 85 4e-17
04_04_1516 - 34122205-34122348,34122430-34122534,34122878-341230... 85 6e-17
06_03_0198 - 17797574-17797717,17797995-17798099,17798509-177986... 84 1e-16
02_02_0339 + 9115297-9115366,9116280-9116407,9117537-9117641,911... 83 3e-16
09_02_0285 + 6894899-6895114,6896197-6896422,6896889-6896992,689... 81 9e-16
02_01_0154 + 1078561-1078630,1078758-1078885,1079016-1079120,107... 81 9e-16
01_06_0129 - 26770543-26770720,26774592-26774719,26774829-267749... 81 9e-16
05_05_0110 + 22470869-22470920,22471044-22471146,22473261-224733... 77 1e-14
01_06_1289 - 36010924-36011001,36011441-36011518,36012321-360124... 75 5e-14
07_01_0481 - 3621798-3621926,3622572-3622660,3622780-3622933,362... 70 2e-12
10_08_0755 - 20329127-20329189,20329276-20329389,20329465-203296... 63 3e-10
03_01_0159 + 1298002-1298070,1298181-1298264,1300354-1300506,130... 63 3e-10
01_07_0028 - 40588611-40588718,40588812-40588901,40589966-405901... 62 5e-10
01_05_0633 + 23840427-23840562,23840699-23840768,23840846-238409... 62 6e-10
10_08_0197 + 15666873-15666916,15667098-15667177,15667490-156676... 57 2e-08
06_03_1005 + 26837047-26837093,26837644-26837731,26837854-268379... 57 2e-08
01_06_0222 - 27662122-27662159,27662251-27662341,27662760-276628... 54 9e-08
01_01_1187 + 9444742-9445317 54 9e-08
04_04_0902 - 29262611-29262673,29262796-29262909,29262995-292631... 53 3e-07
02_05_0558 - 29950120-29950319,29951213-29951579,29952067-29952372 42 4e-04
02_05_0555 - 29937973-29938395,29938509-29938790 42 4e-04
05_01_0561 + 4905107-4905272,4905945-4906033,4906832-4906960 39 0.004
01_01_0939 - 7404209-7404490,7405057-7405368,7405470-7405609,740... 37 0.015
09_02_0290 - 6963673-6963966,6964279-6964590,6964693-6964832,696... 37 0.019
05_07_0075 - 27513927-27514220,27514806-27515117,27515203-275153... 36 0.045
03_02_0755 + 10932897-10933010,10933446-10933577,10933666-109337... 31 0.73
01_01_0928 + 7339796-7339806,7339923-7340043,7340463-7340549,734... 31 0.73
05_07_0252 - 28680918-28681186,28683020-28683026 31 0.97
12_02_1249 - 27331801-27331896,27331984-27332072,27334020-273340... 31 1.3
01_06_0247 + 27851206-27851255,27851382-27851496,27852280-278524... 30 1.7
02_05_1142 - 34391144-34391590,34391715-34391904,34392058-343921... 29 2.9
07_03_1622 + 28193862-28195181 28 6.8
02_05_0556 - 29940146-29940158,29941060-29941240,29941271-29941670 28 6.8
11_01_0620 - 4964263-4965052,4965578-4965663,4966332-4966413,496... 28 9.0
02_01_0305 + 2041370-2043114,2043764-2044121 28 9.0
01_05_0439 - 22159425-22159520,22160137-22160345,22161028-221610... 28 9.0
>10_02_0151 +
5895708-5895736,5896291-5896403,5897956-5898064,
5898580-5898658,5898747-5898863,5900001-5900138
Length = 194
Score = 116 bits (280), Expect = 2e-26
Identities = 65/182 (35%), Positives = 103/182 (56%), Gaps = 1/182 (0%)
Frame = +1
Query: 133 KMITLNRKLKKEHSPPTIGLTTEPVKRISIRDKLLVKEVQEMEENLPATCSVKFED-PNL 309
KM+ L + K+ PVK+ S + L K++ E+ NLP + S+ F + +
Sbjct: 11 KMLNLIKIKDKKKEQAASAAGKAPVKKQSAGELRLHKDISEL--NLPKSTSISFPNGKDD 68
Query: 310 LSEFILTVAPDEGYWKGGKFKFSVIITEEYNMAPPRVKCLTKLWHPNINVDGDICLSLLR 489
L F + V PDEGY+ GG F F+ ++ Y PP+VKC TK++HPNI+++G++CL++LR
Sbjct: 69 LMNFEIIVRPDEGYYLGGTFVFTFQVSPSYPHEPPKVKCKTKVYHPNIDLEGNVCLNILR 128
Query: 490 QTSIDEHGWAPTRRLKDVVWGLNSLFTDLLNFDDPLNIEAAEMYNKDKVQFQVKVQEYIS 669
+ W P + V++GLN LFT N +DPLN EAA + + F+ V+ ++
Sbjct: 129 E------DWKPVLNINTVIYGLNLLFTQ-PNDEDPLNHEAAAVLRDNPKLFEANVKRAMA 181
Query: 670 KG 675
G
Sbjct: 182 GG 183
>09_02_0429 +
9306862-9306970,9307834-9307942,9308538-9308616,
9308806-9308922,9309185-9309314,9311071-9311111
Length = 194
Score = 112 bits (270), Expect = 2e-25
Identities = 65/173 (37%), Positives = 100/173 (57%), Gaps = 1/173 (0%)
Frame = +1
Query: 160 KKEHSPPTIGLTTEPVKRISIRDKLLVKEVQEMEENLPATCSVKFED-PNLLSEFILTVA 336
KKE + T G P K+ S + L K++ E+ NLP ++ F + + L +T+
Sbjct: 11 KKEEAANTNG--RPPAKKQSPGELRLHKDIAEL--NLPKKTNITFPNGKDDLMNIEITLR 66
Query: 337 PDEGYWKGGKFKFSVIITEEYNMAPPRVKCLTKLWHPNINVDGDICLSLLRQTSIDEHGW 516
PDEGY+ GG F F++ + Y PP+VKC TK++HPNI++DG++CL++LR+ W
Sbjct: 67 PDEGYYVGGAFVFTLQVPPTYPHEPPKVKCTTKVYHPNIDLDGNVCLNILRE------DW 120
Query: 517 APTRRLKDVVWGLNSLFTDLLNFDDPLNIEAAEMYNKDKVQFQVKVQEYISKG 675
P + +V+GLN LF N +DPLN +AA + D +F+ VQ +S G
Sbjct: 121 KPVLNINTIVYGLNLLFIQ-PNDEDPLNHDAAAVLRDDPQKFRRNVQTAMSGG 172
>08_02_0468 -
17505905-17506002,17506295-17506424,17506662-17506778,
17506881-17506959,17507546-17507654,17507857-17507969,
17510510-17510570,17511562-17511742,17512903-17512960,
17514292-17514497,17514582-17514671,17514752-17514813,
17514911-17514979,17515330-17515334,17516282-17516454
Length = 516
Score = 111 bits (268), Expect = 4e-25
Identities = 60/159 (37%), Positives = 96/159 (60%), Gaps = 1/159 (0%)
Frame = +1
Query: 202 PVKRISIRDKLLVKEVQEMEENLPATCSVKFED-PNLLSEFILTVAPDEGYWKGGKFKFS 378
P K+ S + L K++ E+ NLP + + F + + L F +T+ PDEGY+ GGKF F+
Sbjct: 326 PAKKQSPGELRLHKDIAEL--NLPKSTRISFPNGKDDLMNFEVTIRPDEGYYVGGKFIFT 383
Query: 379 VIITEEYNMAPPRVKCLTKLWHPNINVDGDICLSLLRQTSIDEHGWAPTRRLKDVVWGLN 558
+ Y PP+VKC TK++HPNI+++G++CL++LR+ W P + +V+GLN
Sbjct: 384 FQVPPAYPHEPPKVKCKTKVYHPNIDLEGNVCLNILRE------DWKPVLNVNTIVYGLN 437
Query: 559 SLFTDLLNFDDPLNIEAAEMYNKDKVQFQVKVQEYISKG 675
LF+ N +DPLN EAA + + +F+ VQ ++ G
Sbjct: 438 LLFSQ-PNDEDPLNHEAAAVLRDNPEKFERNVQRAMAGG 475
>03_06_0260 -
32717142-32717270,32717743-32717831,32717950-32718039,
32721571-32721596,32721772-32721896
Length = 152
Score = 88.6 bits (210), Expect = 5e-18
Identities = 45/148 (30%), Positives = 85/148 (57%)
Frame = +1
Query: 229 KLLVKEVQEMEENLPATCSVKFEDPNLLSEFILTVAPDEGYWKGGKFKFSVIITEEYNMA 408
K L+++ + ++++ PA S D N++ + PD+ W GG FK ++ TE+Y
Sbjct: 7 KRLMRDFKRLQQDPPAGISGAPHDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNK 66
Query: 409 PPRVKCLTKLWHPNINVDGDICLSLLRQTSIDEHGWAPTRRLKDVVWGLNSLFTDLLNFD 588
PP V+ +++++HPNI DG ICL +L ++ W+P + ++ + SL D N +
Sbjct: 67 PPVVRFVSRMFHPNIYADGSICLDIL------QNQWSPIYDVAAILTSIQSLLCD-PNPN 119
Query: 589 DPLNIEAAEMYNKDKVQFQVKVQEYISK 672
P N EAA +++++K ++ KV+E + +
Sbjct: 120 SPANSEAARLFSENKREYNRKVREIVEQ 147
>01_06_1150 +
34910941-34911010,34911611-34911738,34912025-34912129,
34912525-34912668
Length = 148
Score = 85.4 bits (202), Expect = 4e-17
Identities = 44/148 (29%), Positives = 79/148 (53%)
Frame = +1
Query: 229 KLLVKEVQEMEENLPATCSVKFEDPNLLSEFILTVAPDEGYWKGGKFKFSVIITEEYNMA 408
K ++KE+++++++ P +CS ++ + P + + GG F ++ +Y
Sbjct: 4 KRILKELKDLQKDPPTSCSAGPAGEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDYPFK 63
Query: 409 PPRVKCLTKLWHPNINVDGDICLSLLRQTSIDEHGWAPTRRLKDVVWGLNSLFTDLLNFD 588
PP+V TK++HPNIN +G ICL +L++ W+P + V+ + SL TD N D
Sbjct: 64 PPKVSFKTKVFHPNINSNGSICLDILKEQ------WSPALTISKVLLSICSLLTD-PNPD 116
Query: 589 DPLNIEAAEMYNKDKVQFQVKVQEYISK 672
DPL E A MY D+ +++ + + K
Sbjct: 117 DPLVPEIAHMYKTDRPKYETTARSWTQK 144
>04_04_1516 -
34122205-34122348,34122430-34122534,34122878-34123005,
34124003-34124072
Length = 148
Score = 85.0 bits (201), Expect = 6e-17
Identities = 44/148 (29%), Positives = 79/148 (53%)
Frame = +1
Query: 229 KLLVKEVQEMEENLPATCSVKFEDPNLLSEFILTVAPDEGYWKGGKFKFSVIITEEYNMA 408
K ++KE+++++++ P +CS ++ + P + + GG F ++ +Y
Sbjct: 4 KRILKELKDLQKDPPTSCSAGPVGEDMFHWQATIMGPSDSPFAGGVFLVNIHFPPDYPFK 63
Query: 409 PPRVKCLTKLWHPNINVDGDICLSLLRQTSIDEHGWAPTRRLKDVVWGLNSLFTDLLNFD 588
PP+V TK++HPNIN +G ICL +L++ W+P + V+ + SL TD N D
Sbjct: 64 PPKVSFRTKVFHPNINSNGSICLDILKEQ------WSPALTISKVLLSICSLLTD-PNPD 116
Query: 589 DPLNIEAAEMYNKDKVQFQVKVQEYISK 672
DPL E A MY D+ +++ + + K
Sbjct: 117 DPLVPEIAHMYKTDRAKYESTARSWTQK 144
>06_03_0198 -
17797574-17797717,17797995-17798099,17798509-17798636,
17799444-17799513
Length = 148
Score = 84.2 bits (199), Expect = 1e-16
Identities = 45/148 (30%), Positives = 79/148 (53%)
Frame = +1
Query: 229 KLLVKEVQEMEENLPATCSVKFEDPNLLSEFILTVAPDEGYWKGGKFKFSVIITEEYNMA 408
K ++KE+++++++ P +CS ++ + P + + GG F S+ +Y
Sbjct: 4 KRILKELKDLQKDPPTSCSAGPVGEDMFHWQATIMGPADSPYAGGVFLVSIHFPPDYPFK 63
Query: 409 PPRVKCLTKLWHPNINVDGDICLSLLRQTSIDEHGWAPTRRLKDVVWGLNSLFTDLLNFD 588
PP+V TK++HPNIN +G ICL +L++ W+P + V+ + SL TD N D
Sbjct: 64 PPKVAFKTKVFHPNINSNGSICLDILKEQ------WSPALTVSKVLLSICSLLTD-PNPD 116
Query: 589 DPLNIEAAEMYNKDKVQFQVKVQEYISK 672
DPL E A MY D+ +++ + + K
Sbjct: 117 DPLVPEIAHMYKTDRAKYESTARGWTQK 144
>02_02_0339 +
9115297-9115366,9116280-9116407,9117537-9117641,
9118165-9118259,9119472-9119538,9119685-9119720
Length = 166
Score = 82.6 bits (195), Expect = 3e-16
Identities = 44/141 (31%), Positives = 76/141 (53%)
Frame = +1
Query: 229 KLLVKEVQEMEENLPATCSVKFEDPNLLSEFILTVAPDEGYWKGGKFKFSVIITEEYNMA 408
K ++KE+++++++ P +CS ++ + P + + GG F ++ +Y
Sbjct: 4 KRILKELKDLQKDPPTSCSAGPVAEDMFHWQATLMGPSDSPYAGGVFLVTIHFPPDYPFK 63
Query: 409 PPRVKCLTKLWHPNINVDGDICLSLLRQTSIDEHGWAPTRRLKDVVWGLNSLFTDLLNFD 588
PP+V TK++HPNIN +G ICL +L++ W+P + V+ + SL TD N D
Sbjct: 64 PPKVALKTKVFHPNINSNGSICLDILKEQ------WSPALTISKVLLSICSLLTD-PNPD 116
Query: 589 DPLNIEAAEMYNKDKVQFQVK 651
DPL E A MY D+ + Q +
Sbjct: 117 DPLVPEIAHMYKTDRAKGQAE 137
>09_02_0285 +
6894899-6895114,6896197-6896422,6896889-6896992,
6897121-6897239,6897445-6897634
Length = 284
Score = 81.0 bits (191), Expect = 9e-16
Identities = 43/148 (29%), Positives = 76/148 (51%)
Frame = +1
Query: 229 KLLVKEVQEMEENLPATCSVKFEDPNLLSEFILTVAPDEGYWKGGKFKFSVIITEEYNMA 408
K + KE+ ++ ++ P +CS +L + P + + GG F ++ +Y
Sbjct: 4 KRIQKELMDLRKDPPTSCSAGPAGEDLFHWQATIMGPSDSPYAGGVFFVNIHFPPDYPFK 63
Query: 409 PPRVKCLTKLWHPNINVDGDICLSLLRQTSIDEHGWAPTRRLKDVVWGLNSLFTDLLNFD 588
PP+V TK++HPNIN +G ICL +L++ W+P + V+ ++SL TD N D
Sbjct: 64 PPKVNFQTKVYHPNINSNGSICLDILKEQ------WSPALTISKVLLSISSLLTD-PNPD 116
Query: 589 DPLNIEAAEMYNKDKVQFQVKVQEYISK 672
DPL E A +Y + +++ + + K
Sbjct: 117 DPLVPEIAHVYKSQRPRYEETARAWTQK 144
>02_01_0154 +
1078561-1078630,1078758-1078885,1079016-1079120,
1079228-1079371
Length = 148
Score = 81.0 bits (191), Expect = 9e-16
Identities = 42/146 (28%), Positives = 78/146 (53%)
Frame = +1
Query: 235 LVKEVQEMEENLPATCSVKFEDPNLLSEFILTVAPDEGYWKGGKFKFSVIITEEYNMAPP 414
++KE+++++ + P +CS ++ + P++ + GG F ++ +Y PP
Sbjct: 6 IIKELKDLQRDPPTSCSAGPVSDDMFHWQATIMGPNDSPYSGGVFLVTIHFPPDYPFKPP 65
Query: 415 RVKCLTKLWHPNINVDGDICLSLLRQTSIDEHGWAPTRRLKDVVWGLNSLFTDLLNFDDP 594
+V TK++HPNIN +G+ICL +L+ W+P + V+ + SL TD N DDP
Sbjct: 66 KVAFKTKVFHPNINSNGNICLDILKDQ------WSPALTISKVLLSICSLLTD-PNPDDP 118
Query: 595 LNIEAAEMYNKDKVQFQVKVQEYISK 672
L E A M D+++++ + + K
Sbjct: 119 LVPEIAHMCKTDRLRYESTARGWTQK 144
>01_06_0129 -
26770543-26770720,26774592-26774719,26774829-26774933,
26775661-26775788,26777332-26777433,26778760-26778861,
26779777-26779852,26779971-26780059,26780177-26780230,
26780482-26780614,26780671-26780797,26781590-26781648
Length = 426
Score = 81.0 bits (191), Expect = 9e-16
Identities = 43/144 (29%), Positives = 76/144 (52%)
Frame = +1
Query: 214 ISIRDKLLVKEVQEMEENLPATCSVKFEDPNLLSEFILTVAPDEGYWKGGKFKFSVIITE 393
+ + K + KE+++++++ P +CS ++ + P + + GG F ++
Sbjct: 223 LGMASKRIQKELKDLQKDPPTSCSAGPVGEDMFHWQATIMGPSDSPYAGGVFLVTIHFPP 282
Query: 394 EYNMAPPRVKCLTKLWHPNINVDGDICLSLLRQTSIDEHGWAPTRRLKDVVWGLNSLFTD 573
+Y PP+V TK++HPNIN +G ICL +L+ W+P + V+ + SL TD
Sbjct: 283 DYPFKPPKVAFRTKVFHPNINSNGSICLDILKDQ------WSPALTISKVLLSICSLLTD 336
Query: 574 LLNFDDPLNIEAAEMYNKDKVQFQ 645
N DDPL E A MY D+ +++
Sbjct: 337 -PNPDDPLVPEIAHMYKTDRHKYE 359
>05_05_0110 +
22470869-22470920,22471044-22471146,22473261-22473358,
22473430-22473530,22474052-22474129,22474578-22474655
Length = 169
Score = 77.0 bits (181), Expect = 1e-14
Identities = 40/157 (25%), Positives = 81/157 (51%), Gaps = 8/157 (5%)
Frame = +1
Query: 232 LLVKEVQEMEEN-LPATCSVKFEDPNLLSEFILTVAPDEGYWKGGKFKFSVIITEEYNMA 408
LL K+++++ +N + + +D N+ + + P + + GG F + + Y +
Sbjct: 11 LLQKQLKDLAKNPVDGFSAGLVDDSNVFEWQVTIIGPPDTLYDGGYFNAIMTFPQNYPNS 70
Query: 409 PPRVKCLTKLWHPNINVDGDICLSLLRQTSIDEHG-------WAPTRRLKDVVWGLNSLF 567
PP V+ +++WHPN+ DG +C+S+L D +G W P ++ +V + S+
Sbjct: 71 PPSVRFTSEMWHPNVYPDGRVCISILHPPGEDPNGYELASERWTPVHTVESIVLSIISML 130
Query: 568 TDLLNFDDPLNIEAAEMYNKDKVQFQVKVQEYISKGK 678
+ N + P NIEAA+ + + + F+ KV+ + K +
Sbjct: 131 SS-PNDESPANIEAAKDWREKRDDFKKKVRRIVRKSQ 166
>01_06_1289 -
36010924-36011001,36011441-36011518,36012321-36012421,
36012506-36012603,36016213-36016315,36016435-36016486
Length = 169
Score = 75.4 bits (177), Expect = 5e-14
Identities = 41/163 (25%), Positives = 83/163 (50%), Gaps = 8/163 (4%)
Frame = +1
Query: 214 ISIRDKLLVKEVQEMEEN-LPATCSVKFEDPNLLSEFILTVAPDEGYWKGGKFKFSVIIT 390
IS LL K+++++ ++ + + +D N+ + + P + + GG F +
Sbjct: 5 ISQASLLLQKQLKDLAKHPVDGFSAGLVDDSNVFEWQVTIIGPPDTLYDGGYFNAIMSFP 64
Query: 391 EEYNMAPPRVKCLTKLWHPNINVDGDICLSLLRQTSIDEHG-------WAPTRRLKDVVW 549
+ Y +PP V+ +++WHPN+ DG +C+S+L D +G W P ++ +V
Sbjct: 65 QNYPNSPPTVRFTSEMWHPNVYPDGRVCISILHPPGDDPNGYELASERWTPVHTVESIVL 124
Query: 550 GLNSLFTDLLNFDDPLNIEAAEMYNKDKVQFQVKVQEYISKGK 678
+ S+ + N + P NIEAA+ + + + F+ KV+ + K +
Sbjct: 125 SIISMLSG-PNDESPANIEAAKEWREKRDDFKKKVRRLVRKSQ 166
>07_01_0481 -
3621798-3621926,3622572-3622660,3622780-3622933,
3624104-3624111,3625522-3625547,3625757-3625881
Length = 176
Score = 69.7 bits (163), Expect = 2e-12
Identities = 35/108 (32%), Positives = 63/108 (58%)
Frame = +1
Query: 349 YWKGGKFKFSVIITEEYNMAPPRVKCLTKLWHPNINVDGDICLSLLRQTSIDEHGWAPTR 528
Y G FK ++ TE+Y PP V+ +++++HPNI DG ICL +L ++ W+P
Sbjct: 71 YVSVGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDIL------QNQWSPIY 124
Query: 529 RLKDVVWGLNSLFTDLLNFDDPLNIEAAEMYNKDKVQFQVKVQEYISK 672
+ ++ + SL D N + P N EAA +++++K ++ KV+E + +
Sbjct: 125 DVAAILTSIQSLLCD-PNPNSPANSEAARLFSENKREYNRKVREIVEQ 171
>10_08_0755 -
20329127-20329189,20329276-20329389,20329465-20329617,
20331790-20332035
Length = 191
Score = 62.9 bits (146), Expect = 3e-10
Identities = 30/102 (29%), Positives = 55/102 (53%)
Frame = +1
Query: 352 WKGGKFKFSVIITEEYNMAPPRVKCLTKLWHPNINVDGDICLSLLRQTSIDEHGWAPTRR 531
W+GG + ++ +E+Y PP+ K +HPN+ G +CLS+L + S GW P
Sbjct: 85 WEGGYYPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDS----GWRPAIT 140
Query: 532 LKDVVWGLNSLFTDLLNFDDPLNIEAAEMYNKDKVQFQVKVQ 657
+K ++ G+ L D N DP + ++ +DK +++ +V+
Sbjct: 141 VKQILVGIQDLL-DQPNPADPAQTDGYHIFIQDKPEYKRRVR 181
>03_01_0159 +
1298002-1298070,1298181-1298264,1300354-1300506,
1300589-1300702,1300814-1300876
Length = 160
Score = 62.9 bits (146), Expect = 3e-10
Identities = 30/102 (29%), Positives = 54/102 (52%)
Frame = +1
Query: 352 WKGGKFKFSVIITEEYNMAPPRVKCLTKLWHPNINVDGDICLSLLRQTSIDEHGWAPTRR 531
W+GG F ++ +E+Y PP+ K +HPN+ G +CLS+L + S GW P
Sbjct: 54 WEGGYFPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDS----GWRPAIT 109
Query: 532 LKDVVWGLNSLFTDLLNFDDPLNIEAAEMYNKDKVQFQVKVQ 657
+K ++ G+ L D N DP + ++ +D +++ +V+
Sbjct: 110 VKQILVGIQDLL-DQPNPADPAQTDGYHLFIQDPTEYKRRVR 150
>01_07_0028 -
40588611-40588718,40588812-40588901,40589966-40590125,
40590547-40590595,40591158-40591338
Length = 195
Score = 62.1 bits (144), Expect = 5e-10
Identities = 40/137 (29%), Positives = 68/137 (49%), Gaps = 3/137 (2%)
Frame = +1
Query: 241 KEVQEMEENLPAT-CSVKFEDPNLLSEFILTVAPDEGY-WKGGKFKFSVIITEEYNMAPP 414
KE+ E + + S+ D + +S T+A +G ++GG F + + Y PP
Sbjct: 9 KELTECNRDREVSGVSIALHDGSTISHLTGTIAGPQGTPYEGGTFVIDIRLPGGYPFEPP 68
Query: 415 RVKCLTKLWHPNI-NVDGDICLSLLRQTSIDEHGWAPTRRLKDVVWGLNSLFTDLLNFDD 591
+++ +TK+WHPNI + +G ICL +L+ W+P LK + L +L + DD
Sbjct: 69 KMQFITKVWHPNISSQNGAICLDILKDQ------WSPALTLKTALLSLQALLSAPAP-DD 121
Query: 592 PLNIEAAEMYNKDKVQF 642
P + A+ Y +D F
Sbjct: 122 PQDAVVAQQYLRDYSTF 138
>01_05_0633 +
23840427-23840562,23840699-23840768,23840846-23840951,
23841086-23841184,23841320-23841442,23841555-23842691
Length = 556
Score = 61.7 bits (143), Expect = 6e-10
Identities = 37/123 (30%), Positives = 57/123 (46%)
Frame = +1
Query: 304 NLLSEFILTVAPDEGYWKGGKFKFSVIITEEYNMAPPRVKCLTKLWHPNINVDGDICLSL 483
+LLS PDE + G F + I E Y PP V +T ++HPNI+ G ICL +
Sbjct: 39 SLLSFEARIQGPDETVYSKGVFVLKIQIPERYPFQPPNVTFVTPIYHPNIDNGGRICLDI 98
Query: 484 LRQTSIDEHGWAPTRRLKDVVWGLNSLFTDLLNFDDPLNIEAAEMYNKDKVQFQVKVQEY 663
L + W P+ + V+ + L +D N DD L E + Y ++ F + + +
Sbjct: 99 LNLP--PKGAWQPSLNIATVLTSIGLLLSD-PNPDDGLMAEISREYKYNRQVFDINARSW 155
Query: 664 ISK 672
K
Sbjct: 156 TEK 158
>10_08_0197 +
15666873-15666916,15667098-15667177,15667490-15667604,
15667698-15667786,15667850-15667978,15670362-15670492
Length = 195
Score = 56.8 bits (131), Expect = 2e-08
Identities = 38/126 (30%), Positives = 63/126 (50%), Gaps = 8/126 (6%)
Frame = +1
Query: 319 FILTVAPDEGYWKGGKFKFSVIITEEYNMAPPRVKCLTKLWHPNIN-VDGDICLSLLRQT 495
F+ P E ++GG +K V + + Y P + + K++HPN++ + G +CL ++ QT
Sbjct: 33 FVEFRGPTESIYQGGVWKVRVELPDAYPYKSPSIGFVNKIYHPNVDEMSGSVCLDVINQT 92
Query: 496 SIDEHGWAPTRRLKDVVWGLNSLFTDLL-------NFDDPLNIEAAEMYNKDKVQFQVKV 654
G T L + L ++F L N DPLN EAA + +D+ ++ KV
Sbjct: 93 WSPMFG-EITLVLVIISTDLVNVFEVFLPQLLLYPNPSDPLNGEAAALMMRDRPAYEQKV 151
Query: 655 QEYISK 672
+EY K
Sbjct: 152 KEYCEK 157
>06_03_1005 +
26837047-26837093,26837644-26837731,26837854-26837998,
26838150-26838227,26838323-26838435,26838538-26838641,
26838804-26839119
Length = 296
Score = 56.8 bits (131), Expect = 2e-08
Identities = 34/145 (23%), Positives = 73/145 (50%)
Frame = +1
Query: 235 LVKEVQEMEENLPATCSVKFEDPNLLSEFILTVAPDEGYWKGGKFKFSVIITEEYNMAPP 414
L KE++ ++E+ P V D + + F P ++ G F+ ++++ ++ +PP
Sbjct: 59 LAKELKSLDESPPEGIKVIVNDDDFTTIFADIEGPAGTPYENGVFRMKLLLSRDFPQSPP 118
Query: 415 RVKCLTKLWHPNINVDGDICLSLLRQTSIDEHGWAPTRRLKDVVWGLNSLFTDLLNFDDP 594
+ LTK++HPNI G+IC++ L++ W P+ L+ V+ + L + +
Sbjct: 119 KGFFLTKIFHPNIATSGEICVNTLKK------DWNPSLGLRHVLLVVRCLLIEPFP-ESA 171
Query: 595 LNIEAAEMYNKDKVQFQVKVQEYIS 669
LN +A ++ ++ ++ + Y S
Sbjct: 172 LNEQAGKLLLENYEEYARHARLYTS 196
>01_06_0222 -
27662122-27662159,27662251-27662341,27662760-27662801,
27663591-27663649,27664300-27664386,27664501-27664528,
27664683-27664718
Length = 126
Score = 54.4 bits (125), Expect = 9e-08
Identities = 24/74 (32%), Positives = 42/74 (56%)
Frame = +1
Query: 235 LVKEVQEMEENLPATCSVKFEDPNLLSEFILTVAPDEGYWKGGKFKFSVIITEEYNMAPP 414
++KE Q + S + N+ ++ + P + ++GG FK + + EEY MA P
Sbjct: 10 IIKETQRLLSEPAPGISASPSEENMRYFNVMILGPAQSPYEGGVFKLELFLPEEYPMAAP 69
Query: 415 RVKCLTKLWHPNIN 456
+V+ LTK++HPNI+
Sbjct: 70 KVRFLTKIYHPNID 83
>01_01_1187 + 9444742-9445317
Length = 191
Score = 54.4 bits (125), Expect = 9e-08
Identities = 29/101 (28%), Positives = 56/101 (55%), Gaps = 1/101 (0%)
Frame = +1
Query: 352 WKGGKFKFSVIITEEYNMAPPRVKCLTKLWHPNINVDGDICLSLLRQTSIDEHGWAPTRR 531
++G ++ S+ EY PP+V+ T +HPN++ G+ICL +L+ W+
Sbjct: 91 YEGTSYRLSLAFPGEYPYKPPKVRFETPCFHPNVDAHGNICLDILQDK------WSSAYD 144
Query: 532 LKDVVWGLNSLFTDLLNFDDPLNIEAAEMY-NKDKVQFQVK 651
++ ++ + SL + N D PLN +AA ++ N+D+ + V+
Sbjct: 145 VRTILLSIQSLLGE-PNNDSPLNTQAAALWPNQDEFRKMVE 184
>04_04_0902 -
29262611-29262673,29262796-29262909,29262995-29263141,
29264922-29265005,29265151-29265225
Length = 160
Score = 52.8 bits (121), Expect = 3e-07
Identities = 30/107 (28%), Positives = 53/107 (49%)
Frame = +1
Query: 352 WKGGKFKFSVIITEEYNMAPPRVKCLTKLWHPNINVDGDICLSLLRQTSIDEHGWAPTRR 531
W+GG F ++ TE+Y P K + +H N+ G +CLS+L W P+
Sbjct: 56 WEGGYFPLTMQFTEDYPTNAPSCKFPSGFFHINVYDSGAVCLSIL------STAWKPSIT 109
Query: 532 LKDVVWGLNSLFTDLLNFDDPLNIEAAEMYNKDKVQFQVKVQEYISK 672
++ ++ G+ LF D NI + E+Y KD +++ +V++ K
Sbjct: 110 VRQILIGIQELFDDPNPNSAAQNI-SYELYRKDMEEYRKRVRQQAKK 155
>02_05_0558 - 29950120-29950319,29951213-29951579,29952067-29952372
Length = 290
Score = 42.3 bits (95), Expect = 4e-04
Identities = 27/105 (25%), Positives = 51/105 (48%), Gaps = 1/105 (0%)
Frame = +1
Query: 352 WKGGKFKFSVIITEE-YNMAPPRVKCLTKLWHPNINVDGDICLSLLRQTSIDEHGWAPTR 528
+ GG F + + Y P+V T ++HPNI+ +G++ L D W+
Sbjct: 74 YAGGTFPVDIQLPAAGYPFVHPKVTFKTLVYHPNIDEEGNMVL--------DAESWSCAT 125
Query: 529 RLKDVVWGLNSLFTDLLNFDDPLNIEAAEMYNKDKVQFQVKVQEY 663
+L+ ++ G S+ D L D P+N + AE Y D +++ + + +
Sbjct: 126 KLRGLLIGFVSVLYDPL-LDYPINYDIAEQYAYDYERYEAEARAW 169
>02_05_0555 - 29937973-29938395,29938509-29938790
Length = 234
Score = 42.3 bits (95), Expect = 4e-04
Identities = 27/107 (25%), Positives = 48/107 (44%)
Frame = +1
Query: 352 WKGGKFKFSVIITEEYNMAPPRVKCLTKLWHPNINVDGDICLSLLRQTSIDEHGWAPTRR 531
+ GG F V +Y PP++ TK++HPNI+ G + L + + W+P
Sbjct: 67 YAGGVFPVDVWFPYDYPFRPPKLFFKTKVYHPNIDGKGRMALDIF------QDNWSPALT 120
Query: 532 LKDVVWGLNSLFTDLLNFDDPLNIEAAEMYNKDKVQFQVKVQEYISK 672
+ ++ S+ D L D P N A+ Y + ++ K + + K
Sbjct: 121 INKLLLCFVSVLFDPL-LDRPTNRCIAKQYKHEYEAYEEKARAWTQK 166
>05_01_0561 + 4905107-4905272,4905945-4906033,4906832-4906960
Length = 127
Score = 39.1 bits (87), Expect = 0.004
Identities = 21/74 (28%), Positives = 41/74 (55%)
Frame = +1
Query: 451 INVDGDICLSLLRQTSIDEHGWAPTRRLKDVVWGLNSLFTDLLNFDDPLNIEAAEMYNKD 630
+ DG ICL +L ++ W+P + ++ + SL D N + P N EAA +++++
Sbjct: 56 VYADGSICLDIL------QNQWSPIYDVAAILTSIQSLLCDP-NPNSPANSEAARLFSEN 108
Query: 631 KVQFQVKVQEYISK 672
K ++ KV+E + +
Sbjct: 109 KREYNRKVREIVEQ 122
>01_01_0939 -
7404209-7404490,7405057-7405368,7405470-7405609,
7406226-7406289,7406378-7406616,7406957-7406983,
7407590-7407749
Length = 407
Score = 37.1 bits (82), Expect = 0.015
Identities = 38/135 (28%), Positives = 65/135 (48%), Gaps = 7/135 (5%)
Frame = +1
Query: 229 KLLVKEVQEMEENLPATCSVK-FEDP-NLLSEFILTVAPDEGYWKGGKFKFSVIITEEYN 402
K + E + ++++LP + V+ +ED +LL I V P + G F F V EY
Sbjct: 149 KTIQNEWKLLQKDLPESIYVRAYEDRIDLLRAAI--VGPAGTPYHDGLFFFDVRFPSEYP 206
Query: 403 MAPPRVKCLT--KLWHPNINVDGDICLSLLRQ---TSIDEHGWAPTRRLKDVVWGLNSLF 567
+PP+V + +PN+ G +CLSLL T ++ G + + L+ +V +
Sbjct: 207 QSPPKVHYHSGGLRLNPNLYESGKVCLSLLNTWWGTGCEKWGKSKSTILQVLVSIQGLVL 266
Query: 568 TDLLNFDDPLNIEAA 612
D F++P N +A
Sbjct: 267 NDKPYFNEPGNKNSA 281
>09_02_0290 -
6963673-6963966,6964279-6964590,6964693-6964832,
6965124-6965187,6965263-6965493,6965580-6965714,
6966484-6966517,6966664-6966692
Length = 412
Score = 36.7 bits (81), Expect = 0.019
Identities = 32/100 (32%), Positives = 47/100 (47%), Gaps = 6/100 (6%)
Frame = +1
Query: 244 EVQEMEENLPATCSVK-FEDPNLLSEFILTVAPDEGYWKGGKFKFSVIITEEYNMAPPRV 420
E + +E++LP T V+ +ED L ++ V P + G F F V +Y PP V
Sbjct: 155 EWKVLEKDLPGTIFVRVYEDRMELLRAVI-VGPAGTPYHDGLFFFDVYFPSQYPKKPPLV 213
Query: 421 KCLTK--LWHPNINVDGDICLSLLRQTSIDEHG---WAPT 525
+ +PN+ G +CLSLL S HG W P+
Sbjct: 214 NYRSGGLRLNPNLYDSGKVCLSLLNTWS--GHGCEKWNPS 251
>05_07_0075 -
27513927-27514220,27514806-27515117,27515203-27515342,
27515502-27515565,27515637-27516083,27516169-27516303,
27517620-27517737,27517857-27517876
Length = 509
Score = 35.5 bits (78), Expect = 0.045
Identities = 30/103 (29%), Positives = 47/103 (45%), Gaps = 4/103 (3%)
Frame = +1
Query: 229 KLLVKEVQEMEENLPATCSVK-FEDPNLLSEFILTVAPDEGYWKGGKFKFSVIITEEYNM 405
K + E + +E++LP T V+ +ED L ++T P + G F F + Y
Sbjct: 247 KRIQHEWKVLEKDLPDTIFVRAYEDRMDLLRAVIT-GPAGTPYHDGLFFFDIYFPPHYPS 305
Query: 406 APPRVKCLTK--LWHPNINVDGDICLSLLRQTSIDE-HGWAPT 525
PP V + +PN+ G +CLSLL S W+P+
Sbjct: 306 VPPLVNYRSGGLRLNPNLYACGKVCLSLLNTWSGSGCERWSPS 348
>03_02_0755 +
10932897-10933010,10933446-10933577,10933666-10933750,
10934668-10934831,10934911-10935357
Length = 313
Score = 31.5 bits (68), Expect = 0.73
Identities = 25/100 (25%), Positives = 46/100 (46%), Gaps = 1/100 (1%)
Frame = +1
Query: 229 KLLVKEVQEMEEN-LPATCSVKFEDPNLLSEFILTVAPDEGYWKGGKFKFSVIITEEYNM 405
K +++EV+EM+ N P ++ E+ +F + + P + ++GG + + + +Y
Sbjct: 15 KRILQEVKEMQSNPSPDFMAMPLEEDIFEWQFAI-LGPRDSEFEGGIYHGRIQLPSDYPF 73
Query: 406 APPRVKCLTKLWHPNINVDGDICLSLLRQTSIDEHGWAPT 525
PP LT + ICLS+ EH W P+
Sbjct: 74 KPPSFMLLTP--SGRFEIQKKICLSI--SNYHPEH-WQPS 108
>01_01_0928 +
7339796-7339806,7339923-7340043,7340463-7340549,
7341230-7341637,7341726-7341789,7342654-7342793,
7342878-7343189,7343733-7344137
Length = 515
Score = 31.5 bits (68), Expect = 0.73
Identities = 21/79 (26%), Positives = 37/79 (46%), Gaps = 2/79 (2%)
Frame = +1
Query: 256 MEENLPATCSVKFEDPNLLSEFILTVAPDEGYWKGGKFKFSVIITEEYNMAPPRVKCLTK 435
+E++LPA+ V+ + + + P + G F F + + Y PP V +
Sbjct: 225 LEKDLPASIYVRVAEDRMDLLRAAIIGPKGTPYHDGLFFFDIQFSNSYPANPPSVYYHSG 284
Query: 436 --LWHPNINVDGDICLSLL 486
+PN+ +G +CLSLL
Sbjct: 285 GLRINPNLYNNGKVCLSLL 303
>05_07_0252 - 28680918-28681186,28683020-28683026
Length = 91
Score = 31.1 bits (67), Expect = 0.97
Identities = 23/81 (28%), Positives = 37/81 (45%), Gaps = 3/81 (3%)
Frame = -2
Query: 548 HTTSLSLLVGAQPCSSIEVCLSNDKQMSPSTLILGCHNFVKHFTLG---GAILYSSVIMT 378
H L LLVG + SI+VCL K S +I ++ G G +L +V
Sbjct: 7 HRLHLPLLVGEEKWGSIDVCLIRHKCRSAIHVIAEVDTIARYAEAGAAPGQMLSKAVARA 66
Query: 377 LNLNLPPFQYPSSGATVNMNS 315
LNL+ + P++ +++ S
Sbjct: 67 LNLDF--LELPTAANLISLAS 85
>12_02_1249 -
27331801-27331896,27331984-27332072,27334020-27334083,
27334208-27334336,27334554-27334607,27334712-27334741
Length = 153
Score = 30.7 bits (66), Expect = 1.3
Identities = 24/95 (25%), Positives = 42/95 (44%), Gaps = 2/95 (2%)
Frame = +1
Query: 292 FEDPNLLSEFILTVAPDEG-YWKGGKFKFSVIITEEYNMAPPRVKCLTKL-WHPNINVDG 465
++ PN +++ V G + G ++ V E Y M P+V L HP+I +G
Sbjct: 32 YDSPN---RWVIEVTGAAGTLYAGETYQLQVDFPEHYPMEAPQVIFLNPAPMHPHIYSNG 88
Query: 466 DICLSLLRQTSIDEHGWAPTRRLKDVVWGLNSLFT 570
ICL +L + W+P + V + S+ +
Sbjct: 89 HICLDILYDS------WSPAMTVSSVCISILSMLS 117
>01_06_0247 +
27851206-27851255,27851382-27851496,27852280-27852468,
27853698-27854057,27854138-27854201,27854365-27854504,
27854610-27854918,27855135-27855389
Length = 493
Score = 30.3 bits (65), Expect = 1.7
Identities = 28/115 (24%), Positives = 47/115 (40%), Gaps = 3/115 (2%)
Frame = +1
Query: 229 KLLVKEVQEMEENLPATCSVKFEDPNLLSEFILTVAPDEGYWKGGKFKFSVIITEEYNMA 408
K + E + +E++LP V+ + L + + P + G F F V +Y
Sbjct: 245 KRIQHEWKVLEKDLPDNIFVRVYEDRLELLRAVIIGPSGTPYHDGLFFFDVYFPPQYPRN 304
Query: 409 PPRVKCLT--KLWHPNINVDGDICLSLLRQTSIDE-HGWAPTRRLKDVVWGLNSL 564
P V + +PN+ G +CLSLL D W P+ V+ + +L
Sbjct: 305 PLLVIYHSGGMRLNPNLYACGKVCLSLLNTWPGDGCEKWNPSNSTLQVLVSIQAL 359
>02_05_1142 -
34391144-34391590,34391715-34391904,34392058-34392128,
34392403-34392515,34392656-34392749,34392843-34392908,
34393120-34393282,34393441-34393547,34393918-34394115,
34394204-34394329,34394800-34394904,34395056-34395098,
34395334-34395391,34395479-34395659,34395751-34395917,
34396010-34396249,34396341-34396781,34397147-34397272,
34397457-34397561,34397935-34398002,34398169-34398272,
34398856-34399008,34399472-34399570,34399919-34400046,
34400149-34400300,34400423-34400502
Length = 1274
Score = 29.5 bits (63), Expect = 2.9
Identities = 14/50 (28%), Positives = 26/50 (52%)
Frame = +1
Query: 526 RRLKDVVWGLNSLFTDLLNFDDPLNIEAAEMYNKDKVQFQVKVQEYISKG 675
RR+ + W TDLL+ ++ E AE K K++ ++ + ++KG
Sbjct: 813 RRVLTMEWVSGENPTDLLSLSKGISSEIAESSEKQKIEATARLLDLVNKG 862
>07_03_1622 + 28193862-28195181
Length = 439
Score = 28.3 bits (60), Expect = 6.8
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = -2
Query: 560 EFKPHTTSLSLLVGAQPCSSIEV 492
+ PH T+L LL A+PCS V
Sbjct: 77 DLSPHVTALRLLYAAEPCSRFGV 99
>02_05_0556 - 29940146-29940158,29941060-29941240,29941271-29941670
Length = 197
Score = 28.3 bits (60), Expect = 6.8
Identities = 34/152 (22%), Positives = 69/152 (45%), Gaps = 11/152 (7%)
Frame = +1
Query: 241 KEVQEMEENLPATCSVKFED-PNLLSEFILTVAPDEGYWKGGKFKFSVIITEEYNMAPPR 417
+E++++ + PA C E +LL ++ P + GG F V EY PP+
Sbjct: 42 RELEDLWLDPPAYCRPGPEPVTDLLHWEVIIDGPPGTPYAGGTFPVDVWYPNEYPFQPPK 101
Query: 418 VKCLTKLWHPNINVDGDI-CL-----SLLRQTSI-DEH---GWAPTRRLKDVVWGLNSLF 567
+ TK+ ++ + C+ L+ Q+ + EH G R ++ ++ L+
Sbjct: 102 LTFKTKVKSLAQSLSRSLACVHRQISQLMLQSRVPSEHRRRGADGGGRASRLLGFVSILY 161
Query: 568 TDLLNFDDPLNIEAAEMYNKDKVQFQVKVQEY 663
LL++ P+N + AE Y + ++ + +E+
Sbjct: 162 DPLLDY--PINDDIAEQYENEYELYEKEAREW 191
>11_01_0620 -
4964263-4965052,4965578-4965663,4966332-4966413,
4967052-4967156,4967600-4967772,4967988-4968101,
4973939-4974037,4974320-4974398,4975424-4975492,
4975955-4976061
Length = 567
Score = 27.9 bits (59), Expect = 9.0
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +1
Query: 547 WGLNSLFTDLLNFDDPLNIEAAEMYNKDKVQFQVKVQ 657
W +N D++N D N+ A + + V F V+VQ
Sbjct: 21 WAVNIELCDIINMDPGYNLMEATDFGDELVSFVVEVQ 57
>02_01_0305 + 2041370-2043114,2043764-2044121
Length = 700
Score = 27.9 bits (59), Expect = 9.0
Identities = 15/46 (32%), Positives = 21/46 (45%)
Frame = -2
Query: 602 MFNGSSKLSRSVKSEFKPHTTSLSLLVGAQPCSSIEVCLSNDKQMS 465
MF+ S K S S + P TSL + +QP ++I S S
Sbjct: 367 MFSSSGKRSSSTSRQQTPSPTSLPAAIPSQPAAAISSSSSETNSSS 412
>01_05_0439 -
22159425-22159520,22160137-22160345,22161028-22161066,
22161196-22161356,22161447-22161518,22162002-22162183,
22162580-22162703,22164196-22164299,22165526-22165725,
22165838-22166069,22166156-22166239,22166329-22166386,
22166724-22166771,22167924-22168081,22168451-22168501,
22168585-22168658,22168760-22168835,22169685-22169729,
22169833-22169899,22169978-22170095,22170580-22170775,
22171551-22171640,22171985-22172039,22172755-22172975,
22173362-22173454,22173608-22173721,22173918-22173981,
22174081-22174181,22174306-22174447,22174528-22174729,
22174883-22174976,22176172-22176348
Length = 1248
Score = 27.9 bits (59), Expect = 9.0
Identities = 20/55 (36%), Positives = 26/55 (47%)
Frame = +1
Query: 502 DEHGWAPTRRLKDVVWGLNSLFTDLLNFDDPLNIEAAEMYNKDKVQFQVKVQEYI 666
DE A LK + NS D+L D L + +AEMY KD Q VQ ++
Sbjct: 651 DEQFIAVKELLKTAITRANSR-NDMLTIRDALEV-SAEMYKKDPNNVQDYVQRHL 703
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,096,405
Number of Sequences: 37544
Number of extensions: 324866
Number of successful extensions: 791
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 763
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 773
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1968901276
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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