Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P05_F_N16
(744 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81108-2|CAB03238.1| 180|Caenorhabditis elegans Hypothetical pr... 179 2e-45
U08139-1|AAA83388.1| 192|Caenorhabditis elegans ubc-1 protein. 88 7e-18
AF045638-8|AAC02561.2| 192|Caenorhabditis elegans Ubiquitin con... 88 7e-18
Z22179-13|CAA80166.1| 164|Caenorhabditis elegans Hypothetical p... 86 3e-17
Z68337-1|CAA92745.1| 147|Caenorhabditis elegans Hypothetical pr... 83 2e-16
S56051-1|AAB25489.2| 147|Caenorhabditis elegans ubiquitin-conju... 83 2e-16
AC024817-43|AAK93865.2| 151|Caenorhabditis elegans Ubiquitin co... 76 2e-14
AC025726-12|AAK73914.3| 243|Caenorhabditis elegans Ubiquitin co... 74 9e-14
AL110500-10|CAB60431.1| 170|Caenorhabditis elegans Hypothetical... 73 3e-13
U00035-7|AAA50648.2| 153|Caenorhabditis elegans Ubiquitin conju... 69 4e-12
U70849-3|AAK67232.1| 166|Caenorhabditis elegans Ubiquitin conju... 65 4e-11
AF106565-1|AAC97374.1| 166|Caenorhabditis elegans ubiquitin-con... 65 4e-11
U41026-5|AAA82352.2| 546|Caenorhabditis elegans Ubiquitin conju... 64 1e-10
AF099919-11|AAC68796.1| 199|Caenorhabditis elegans Ubiquitin co... 56 3e-08
U13644-3|AAB52677.1| 230|Caenorhabditis elegans Ubiquitin e2 (c... 53 2e-07
AC024876-5|AAF60891.2| 221|Caenorhabditis elegans Ubiquitin con... 53 2e-07
Z66520-3|CAA91389.2| 160|Caenorhabditis elegans Hypothetical pr... 50 1e-06
U40411-1|AAC47063.2| 679|Caenorhabditis elegans Ubiquitin conju... 43 2e-04
U39674-5|AAA80415.2| 229|Caenorhabditis elegans Ubiquitin conju... 43 2e-04
AC024747-1|AAO21404.1| 203|Caenorhabditis elegans Ubiquitin con... 31 0.65
Z11126-4|CAA77472.2| 180|Caenorhabditis elegans Hypothetical pr... 31 0.86
L13200-1|AAA28193.1| 1000|Caenorhabditis elegans Hypothetical pr... 30 2.0
AL032653-6|CAA21716.1| 152|Caenorhabditis elegans Hypothetical ... 30 2.0
AC025723-8|AAK29942.1| 1273|Caenorhabditis elegans C.elegans hom... 30 2.0
Z68227-8|CAA92513.1| 275|Caenorhabditis elegans Hypothetical pr... 29 2.6
AL590343-1|CAC35865.1| 387|Caenorhabditis elegans Hypothetical ... 29 2.6
AL032622-1|CAA21497.1| 387|Caenorhabditis elegans Y66A7A.1 prot... 29 2.6
U53341-2|AAC69108.2| 645|Caenorhabditis elegans Hypothetical pr... 28 6.1
U23517-9|AAB93334.2| 314|Caenorhabditis elegans Ubiquitin conju... 28 6.1
>Z81108-2|CAB03238.1| 180|Caenorhabditis elegans Hypothetical
protein R09B3.4 protein.
Length = 180
Score = 179 bits (435), Expect = 2e-45
Identities = 82/158 (51%), Positives = 114/158 (72%), Gaps = 4/158 (2%)
Frame = +1
Query: 211 RISIRDKLLVKEVQEMEENL----PATCSVKFEDPNLLSEFILTVAPDEGYWKGGKFKFS 378
RI++RDKLL +E+Q++E L ++ + L E LTV P EG ++GGKF+F
Sbjct: 21 RIAVRDKLLAQELQQLETALRDQKQKLWHLEVPSTSCLHELELTVTPQEGIYRGGKFRFK 80
Query: 379 VIITEEYNMAPPRVKCLTKLWHPNINVDGDICLSLLRQTSIDEHGWAPTRRLKDVVWGLN 558
+ + EYN PP VKCLTK+WHPNIN DG ICLS+LRQ S+D++GW PTR L DVV GL
Sbjct: 81 ITVPPEYNNVPPVVKCLTKVWHPNINEDGSICLSILRQNSLDQYGWRPTRNLTDVVHGLV 140
Query: 559 SLFTDLLNFDDPLNIEAAEMYNKDKVQFQVKVQEYISK 672
SLF DL++F+D LNI+AA+M+++++ F +V+EYIS+
Sbjct: 141 SLFNDLMDFNDALNIQAAQMWSQNRESFNHRVREYISR 178
>U08139-1|AAA83388.1| 192|Caenorhabditis elegans ubc-1 protein.
Length = 192
Score = 87.8 bits (208), Expect = 7e-18
Identities = 45/146 (30%), Positives = 86/146 (58%)
Frame = +1
Query: 235 LVKEVQEMEENLPATCSVKFEDPNLLSEFILTVAPDEGYWKGGKFKFSVIITEEYNMAPP 414
L+++ ++++E+ PA S + N+L+ + P E ++ G FK S+ TEEY PP
Sbjct: 9 LMRDFKKLQEDPPAGVSGAPTEDNILTWEAIIFGPQETPFEDGTFKLSLEFTEEYPNKPP 68
Query: 415 RVKCLTKLWHPNINVDGDICLSLLRQTSIDEHGWAPTRRLKDVVWGLNSLFTDLLNFDDP 594
VK ++K++HPN+ DG ICL +L ++ W+PT + ++ + SL D N + P
Sbjct: 69 TVKFISKMFHPNVYADGSICLDIL------QNRWSPTYDVAAILTSIQSLL-DEPNPNSP 121
Query: 595 LNIEAAEMYNKDKVQFQVKVQEYISK 672
N AA++Y +++ +++ +VQ+ + +
Sbjct: 122 ANSLAAQLYQENRREYEKRVQQIVEQ 147
>AF045638-8|AAC02561.2| 192|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein1 protein.
Length = 192
Score = 87.8 bits (208), Expect = 7e-18
Identities = 45/146 (30%), Positives = 86/146 (58%)
Frame = +1
Query: 235 LVKEVQEMEENLPATCSVKFEDPNLLSEFILTVAPDEGYWKGGKFKFSVIITEEYNMAPP 414
L+++ ++++E+ PA S + N+L+ + P E ++ G FK S+ TEEY PP
Sbjct: 9 LMRDFKKLQEDPPAGVSGAPTEDNILTWEAIIFGPQETPFEDGTFKLSLEFTEEYPNKPP 68
Query: 415 RVKCLTKLWHPNINVDGDICLSLLRQTSIDEHGWAPTRRLKDVVWGLNSLFTDLLNFDDP 594
VK ++K++HPN+ DG ICL +L ++ W+PT + ++ + SL D N + P
Sbjct: 69 TVKFISKMFHPNVYADGSICLDIL------QNRWSPTYDVAAILTSIQSLL-DEPNPNSP 121
Query: 595 LNIEAAEMYNKDKVQFQVKVQEYISK 672
N AA++Y +++ +++ +VQ+ + +
Sbjct: 122 ANSLAAQLYQENRREYEKRVQQIVEQ 147
>Z22179-13|CAA80166.1| 164|Caenorhabditis elegans Hypothetical
protein F58A4.10 protein.
Length = 164
Score = 85.8 bits (203), Expect = 3e-17
Identities = 43/157 (27%), Positives = 87/157 (55%), Gaps = 8/157 (5%)
Frame = +1
Query: 232 LLVKEVQEMEENLPATCSVKFEDPNLLSEF-ILTVAPDEGYWKGGKFKFSVIITEEYNMA 408
LL K++ +M S D N + ++ +L + P + ++GG FK + +Y
Sbjct: 7 LLKKQLADMRRVPVDGFSAGLVDDNDIYKWEVLVIGPPDTLYEGGFFKAILDFPRDYPQK 66
Query: 409 PPRVKCLTKLWHPNINVDGDICLSLLRQTSIDEHG-------WAPTRRLKDVVWGLNSLF 567
PP++K ++++WHPNI+ +G++C+S+L D+ G W P ++ ++ + S+
Sbjct: 67 PPKMKFISEIWHPNIDKEGNVCISILHDPGDDKWGYERPEERWLPVHTVETILLSVISML 126
Query: 568 TDLLNFDDPLNIEAAEMYNKDKVQFQVKVQEYISKGK 678
TD NF+ P N++AA+M ++ +F+ KV + + + +
Sbjct: 127 TD-PNFESPANVDAAKMQRENYAEFKKKVAQCVRRSQ 162
>Z68337-1|CAA92745.1| 147|Caenorhabditis elegans Hypothetical
protein M7.1 protein.
Length = 147
Score = 83.0 bits (196), Expect = 2e-16
Identities = 47/148 (31%), Positives = 75/148 (50%)
Frame = +1
Query: 229 KLLVKEVQEMEENLPATCSVKFEDPNLLSEFILTVAPDEGYWKGGKFKFSVIITEEYNMA 408
K + KE+Q++ + PA CS +L + P E ++GG F ++ +Y
Sbjct: 4 KRIQKELQDLGRDPPAQCSAGPVGDDLFHWQATIMGPPESPYQGGVFFLTIHFPTDYPFK 63
Query: 409 PPRVKCLTKLWHPNINVDGDICLSLLRQTSIDEHGWAPTRRLKDVVWGLNSLFTDLLNFD 588
PP+V T+++HPNIN +G ICL +LR W+P + V+ + SL D N D
Sbjct: 64 PPKVAFTTRIYHPNINSNGSICLDILRSQ------WSPALTISKVLLSICSLLCD-PNPD 116
Query: 589 DPLNIEAAEMYNKDKVQFQVKVQEYISK 672
DPL E A +Y D+ ++ +E+ K
Sbjct: 117 DPLVPEIARIYKTDRERYNQLAREWTQK 144
>S56051-1|AAB25489.2| 147|Caenorhabditis elegans
ubiquitin-conjugating enzyme protein.
Length = 147
Score = 83.0 bits (196), Expect = 2e-16
Identities = 47/148 (31%), Positives = 75/148 (50%)
Frame = +1
Query: 229 KLLVKEVQEMEENLPATCSVKFEDPNLLSEFILTVAPDEGYWKGGKFKFSVIITEEYNMA 408
K + KE+Q++ + PA CS +L + P E ++GG F ++ +Y
Sbjct: 4 KRIQKELQDLGRDPPAQCSAGPVGDDLFHWQATIMGPPESPYQGGVFFLTIHFPTDYPFK 63
Query: 409 PPRVKCLTKLWHPNINVDGDICLSLLRQTSIDEHGWAPTRRLKDVVWGLNSLFTDLLNFD 588
PP+V T+++HPNIN +G ICL +LR W+P + V+ + SL D N D
Sbjct: 64 PPKVAFTTRIYHPNINSNGSICLDILRSQ------WSPALTISKVLLSICSLLCD-PNPD 116
Query: 589 DPLNIEAAEMYNKDKVQFQVKVQEYISK 672
DPL E A +Y D+ ++ +E+ K
Sbjct: 117 DPLVPEIARIYKTDRERYNQLAREWTQK 144
>AC024817-43|AAK93865.2| 151|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein13 protein.
Length = 151
Score = 76.2 bits (179), Expect = 2e-14
Identities = 39/135 (28%), Positives = 73/135 (54%)
Frame = +1
Query: 235 LVKEVQEMEENLPATCSVKFEDPNLLSEFILTVAPDEGYWKGGKFKFSVIITEEYNMAPP 414
++KE Q + + S ++ N ++ PD+ + GG FK + + EEY MA P
Sbjct: 9 IIKETQRLLADPVPGISANPDESNARYFHVMIAGPDDSPFAGGVFKLELFLPEEYPMAAP 68
Query: 415 RVKCLTKLWHPNINVDGDICLSLLRQTSIDEHGWAPTRRLKDVVWGLNSLFTDLLNFDDP 594
+V+ +TK++HPNI+ G ICL +L+ W+P +++ V+ + +L + N +DP
Sbjct: 69 KVRFMTKIYHPNIDKLGRICLDILKDK------WSPALQIRTVLLSIQALLS-APNPEDP 121
Query: 595 LNIEAAEMYNKDKVQ 639
L + AE + ++ +
Sbjct: 122 LATDVAEQWKTNEAE 136
>AC025726-12|AAK73914.3| 243|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein3 protein.
Length = 243
Score = 74.1 bits (174), Expect = 9e-14
Identities = 40/155 (25%), Positives = 75/155 (48%), Gaps = 7/155 (4%)
Frame = +1
Query: 229 KLLVKEVQEMEENLPATCSVKFEDPNLLSEFILTVAPDEGYWKGGKFKFSVIITEEYNMA 408
+ L E++ ++ ++ + NL + P + ++GG FK S+ Y +
Sbjct: 13 RALTMELKNLQSQPVEGFTIDVNEDNLFVWTVGIYGPPKTLYQGGYFKASIRFPSNYPYS 72
Query: 409 PPRVKCLTKLWHPNINVDGDICLSLLRQTSIDEHG-------WAPTRRLKDVVWGLNSLF 567
PP +K TK+WHPN+ +GD+C+S+L D W PT+ ++ ++ + SL
Sbjct: 73 PPSMKFTTKVWHPNVYENGDLCISILHSPIDDPQSGELACERWNPTQSVRTILLSVISLL 132
Query: 568 TDLLNFDDPLNIEAAEMYNKDKVQFQVKVQEYISK 672
+ N P N++A+ MY K K + + ++K
Sbjct: 133 NE-PNTSSPANVDASVMYRKWKEDQDPEYAKIVTK 166
>AL110500-10|CAB60431.1| 170|Caenorhabditis elegans Hypothetical
protein Y87G2A.9 protein.
Length = 170
Score = 72.5 bits (170), Expect = 3e-13
Identities = 38/156 (24%), Positives = 76/156 (48%), Gaps = 8/156 (5%)
Frame = +1
Query: 229 KLLVKEVQEMEENLP-ATCSVKFEDPNLLSEFILTVAPDEGYWKGGKFKFSVIITEEYNM 405
K L+ E +E+ P + ++ N L P+E + G F + ++Y +
Sbjct: 7 KRLMTEYKELTTRPPEGIIAAPIDEDNFFEWECLITGPEETCFANGVFPARITFPQDYPL 66
Query: 406 APPRVKCLTKLWHPNINVDGDICLSLLRQTSIDEHG-------WAPTRRLKDVVWGLNSL 564
+PP+++ ++HPNI DG +C+S+L D G W+P + ++ ++ + S+
Sbjct: 67 SPPKMRFTCGIFHPNIYADGRVCISILHAPGDDPTGYELSNERWSPVQSIEKILLSVVSM 126
Query: 565 FTDLLNFDDPLNIEAAEMYNKDKVQFQVKVQEYISK 672
+ N + P N+ AA+M+ +D+ QF+ + K
Sbjct: 127 LAE-PNDESPANVSAAKMWREDRAQFEKIADSLVRK 161
>U00035-7|AAA50648.2| 153|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein18 protein.
Length = 153
Score = 68.9 bits (161), Expect = 4e-12
Identities = 42/147 (28%), Positives = 72/147 (48%), Gaps = 1/147 (0%)
Frame = +1
Query: 235 LVKEVQEMEE-NLPATCSVKFEDPNLLSEFILTVAPDEGYWKGGKFKFSVIITEEYNMAP 411
L KE+ +++ + A +V+ E+ NLL +L + E Y KG FK + +Y P
Sbjct: 7 LQKELGDLKNCGVKAYENVECEETNLLKWTVLLIPDKEPYNKGA-FKVGITFPVDYPFKP 65
Query: 412 PRVKCLTKLWHPNINVDGDICLSLLRQTSIDEHGWAPTRRLKDVVWGLNSLFTDLLNFDD 591
P+V TK++HPN++ +G CL + + W P + + V+ L SL +
Sbjct: 66 PKVAFETKIYHPNVDEEGKFCLPI-----VTAENWKPATKTEQVMMALLSLINE-PEPSH 119
Query: 592 PLNIEAAEMYNKDKVQFQVKVQEYISK 672
P+ + AE + KD +F +E+ K
Sbjct: 120 PIRADVAEEFQKDHKKFMKTAEEHTRK 146
>U70849-3|AAK67232.1| 166|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein9 protein.
Length = 166
Score = 65.3 bits (152), Expect = 4e-11
Identities = 28/103 (27%), Positives = 58/103 (56%)
Frame = +1
Query: 352 WKGGKFKFSVIITEEYNMAPPRVKCLTKLWHPNINVDGDICLSLLRQTSIDEHGWAPTRR 531
W+GG ++ ++ +++ PP+ K L+HPN+ G +CLSLL + W P+
Sbjct: 53 WEGGLYRIRMLFKDDFPSTPPKCKFEPPLFHPNVYPSGTVCLSLLDENK----DWKPSIS 108
Query: 532 LKDVVWGLNSLFTDLLNFDDPLNIEAAEMYNKDKVQFQVKVQE 660
+K ++ G+ L N +DP EA ++Y +++ +++ +V++
Sbjct: 109 IKQLLIGIQDLLNH-PNIEDPAQAEAYQIYCQNRAEYEKRVKK 150
>AF106565-1|AAC97374.1| 166|Caenorhabditis elegans
ubiquitin-conjugating enzyme 9homolog protein.
Length = 166
Score = 65.3 bits (152), Expect = 4e-11
Identities = 28/103 (27%), Positives = 58/103 (56%)
Frame = +1
Query: 352 WKGGKFKFSVIITEEYNMAPPRVKCLTKLWHPNINVDGDICLSLLRQTSIDEHGWAPTRR 531
W+GG ++ ++ +++ PP+ K L+HPN+ G +CLSLL + W P+
Sbjct: 53 WEGGLYRIRMLFKDDFPSTPPKCKFEPPLFHPNVYPSGTVCLSLLDENK----DWKPSIS 108
Query: 532 LKDVVWGLNSLFTDLLNFDDPLNIEAAEMYNKDKVQFQVKVQE 660
+K ++ G+ L N +DP EA ++Y +++ +++ +V++
Sbjct: 109 IKQLLIGIQDLLNH-PNIEDPAQAEAYQIYCQNRAEYEKRVKK 150
>U41026-5|AAA82352.2| 546|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein23 protein.
Length = 546
Score = 63.7 bits (148), Expect = 1e-10
Identities = 50/172 (29%), Positives = 84/172 (48%), Gaps = 4/172 (2%)
Frame = +1
Query: 202 PVKRISIRDKLLVKEVQEMEENLPATCSVKFEDPNLLSEFILTVAPDEGYWKGGKFKFSV 381
P+K IS+ + L +E E N+ +VKF P + I V +E ++GG F+ +
Sbjct: 348 PMKVISVTPQNLPEEPNVSETNI---VTVKFRLPKGIQGIIKGV--EETPYEGGIFELDI 402
Query: 382 IITEEYNMAPPRVKCLTKLWHPNIN-VDGDICLSLLRQTSIDEHGWAPTRRLKDVVWGLN 558
I E Y P VK +TK+WHP+++ DG ICL +D W + + V+ +
Sbjct: 403 KIGESYPFKAPTVKFITKIWHPSVSPFDGTICLH-----DVDNGVWPVSMTIYKVLIVIQ 457
Query: 559 SLFTDLLNFDDPLNIEAAEMYNKDKVQFQVKVQEYISK---GKR*NRFKQCC 705
S ++ N +P+++E E ++ F+ K E+ +K G R + Q C
Sbjct: 458 SWMSN-FNEKEPIDVEILEQATNNREVFE-KTAEFWTKRFAGSRRKPYNQEC 507
>AF099919-11|AAC68796.1| 199|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein20 protein.
Length = 199
Score = 56.0 bits (129), Expect = 3e-08
Identities = 34/113 (30%), Positives = 55/113 (48%), Gaps = 1/113 (0%)
Frame = +1
Query: 337 PDEGYWKGGKFKFSVIITEEYNMAPPRVKCLTKLWHPNINVD-GDICLSLLRQTSIDEHG 513
PD Y GG F + I ++Y +PP VK TK+WHPN++ G ICL +L+
Sbjct: 47 PDTPY-AGGMFDLDIKIPDQYPFSPPNVKFSTKIWHPNVSSQTGVICLDILKDQ------ 99
Query: 514 WAPTRRLKDVVWGLNSLFTDLLNFDDPLNIEAAEMYNKDKVQFQVKVQEYISK 672
WA + L+ V+ + +L DP + A+ Y + F+ + + +K
Sbjct: 100 WAASLTLRTVLLSIQALMC-TPEPKDPQDAVVAKQYMEKPAVFKATAEYWTTK 151
>U13644-3|AAB52677.1| 230|Caenorhabditis elegans Ubiquitin e2
(conjugating enzyme)variant protein 2 protein.
Length = 230
Score = 53.2 bits (122), Expect = 2e-07
Identities = 36/127 (28%), Positives = 63/127 (49%), Gaps = 1/127 (0%)
Frame = +1
Query: 286 VKFEDPNLLSEFILTVAPDEGY-WKGGKFKFSVIITEEYNMAPPRVKCLTKLWHPNINVD 462
+ FE ++ +I TV G W+GG+++ SV ++ + PP + T L HPN+++
Sbjct: 60 ISFEGADIWCSWICTVPGPRGSPWEGGEYEVSVNF-HKWPIIPPICEFKTPLHHPNVDLR 118
Query: 463 GDICLSLLRQTSIDEHGWAPTRRLKDVVWGLNSLFTDLLNFDDPLNIEAAEMYNKDKVQF 642
G I L +L Q EH W+ LK ++ +++L + NIEA Y + +
Sbjct: 119 GSIYLKMLEQ----EH-WSSETSLKKLLREISNLLA-TPDLTQAANIEAWMEYENQRENY 172
Query: 643 QVKVQEY 663
+ K + Y
Sbjct: 173 EAKARAY 179
>AC024876-5|AAF60891.2| 221|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein8 protein.
Length = 221
Score = 53.2 bits (122), Expect = 2e-07
Identities = 36/138 (26%), Positives = 64/138 (46%), Gaps = 2/138 (1%)
Frame = +1
Query: 304 NLLSEFILTV-APDEGYWKGGKFKFSVIITEEYNMAPPRVKCLTKLWHPNIN-VDGDICL 477
N SEFI+ P + ++ G ++ V + ++Y P + L K++HPNI+ G +CL
Sbjct: 30 NGCSEFIVRFHGPKDTAYENGVWRIRVDMPDKYPFKSPSIGFLNKIFHPNIDEASGTVCL 89
Query: 478 SLLRQTSIDEHGWAPTRRLKDVVWGLNSLFTDLLNFDDPLNIEAAEMYNKDKVQFQVKVQ 657
++ Q W L ++ N DPLN EAA +Y +++ +
Sbjct: 90 DVINQA------WTALYDLTNIFDTFLPQLLTYPNAADPLNGEAARLYIHKPEEYRRTCR 143
Query: 658 EYISKGKR*NRFKQCCNP 711
EY+ + +R + C+P
Sbjct: 144 EYVMRFASEHRAIEGCSP 161
>Z66520-3|CAA91389.2| 160|Caenorhabditis elegans Hypothetical
protein F49E12.4 protein.
Length = 160
Score = 50.4 bits (115), Expect = 1e-06
Identities = 34/119 (28%), Positives = 56/119 (47%), Gaps = 1/119 (0%)
Frame = +1
Query: 319 FILTVAPDEGYWKGGKFKFSVIITEEYNMAPPRVKCLTKLWHPNIN-VDGDICLSLLRQT 495
F + D +K F ++ + EY PP +K ++HPN++ V ++C +L Q
Sbjct: 46 FQFKIIGDGVLYKNMIFTLTLDVNVEYPFKPPYLKFCHNVYHPNVDPVTCELCSPMLLQ- 104
Query: 496 SIDEHGWAPTRRLKDVVWGLNSLFTDLLNFDDPLNIEAAEMYNKDKVQFQVKVQEYISK 672
W P ++DV+ L L + + P+NI+AA Y +KV+F K E K
Sbjct: 105 ----ENWKPETTMEDVLLNLIVLLNE-PDLSRPVNIDAAHDYIHNKVEFVKKSTELAKK 158
>U40411-1|AAC47063.2| 679|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein17 protein.
Length = 679
Score = 43.2 bits (97), Expect = 2e-04
Identities = 33/118 (27%), Positives = 52/118 (44%), Gaps = 10/118 (8%)
Frame = +1
Query: 223 RDKLLVKEVQEMEENLPATCS----VKFEDPNLLSEFILTVAPDEGYWKGGKFKFSVIIT 390
R K + KE+ + LP S V +++ + +L PD+ + G F+F +
Sbjct: 410 RTKRIAKELASIANALPLNASNSIYVCYDEGRVDIIKVLISGPDDTPYANGLFEFDIFFP 469
Query: 391 EEYNMAPPRVKCLTK-----LWHPNINVDGDICLSLL-RQTSIDEHGWAPTRRLKDVV 546
Y +PP+ LT ++PN+ DG ICLS+L E W P L V+
Sbjct: 470 TGYPFSPPKCAFLTTGSGNVRFNPNLYNDGKICLSILGTWEGRPEEKWNPYCSLMQVL 527
>U39674-5|AAA80415.2| 229|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein21 protein.
Length = 229
Score = 43.2 bits (97), Expect = 2e-04
Identities = 34/124 (27%), Positives = 54/124 (43%), Gaps = 16/124 (12%)
Frame = +1
Query: 241 KEVQEMEENLPATCSVKFEDPNLLSEFILTVAPDEGYWKGGKFKFSVIITEEYNMAPPRV 420
KEV + A V+ ++ NL+ P+ + GG F+ V I E Y PP+V
Sbjct: 28 KEVANASDITEAGIHVEIKENNLMDIKGFIKGPEGTPYAGGTFEIKVDIPEHYPFEPPKV 87
Query: 421 ---------------KCLTKLWHPNINVD-GDICLSLLRQTSIDEHGWAPTRRLKDVVWG 552
K +T++WHPNI+ G ICL +L+ W + L+ V+
Sbjct: 88 TEIIFHIRAFEYIQAKFVTRIWHPNISSQTGTICLDILKDK------WTASLTLRTVLLS 141
Query: 553 LNSL 564
L ++
Sbjct: 142 LQAM 145
>AC024747-1|AAO21404.1| 203|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein26 protein.
Length = 203
Score = 31.5 bits (68), Expect = 0.65
Identities = 26/114 (22%), Positives = 49/114 (42%), Gaps = 1/114 (0%)
Frame = +1
Query: 235 LVKEVQEM-EENLPATCSVKFEDPNLLSEFILTVAPDEGYWKGGKFKFSVIITEEYNMAP 411
L K+ Q + +E +P + E L +I+ AP Y +GG + ++ +++ P
Sbjct: 13 LKKDYQRLLKEPVPFMKAAPLETNILEWRYIIIGAPKTPY-EGGIYMGKLLFPKDFPFKP 71
Query: 412 PRVKCLTKLWHPNINVDGDICLSLLRQTSIDEHGWAPTRRLKDVVWGLNSLFTD 573
P + LT + + +CLS+ + W P + ++ GL S D
Sbjct: 72 PAILMLTP--NGRFQTNTRLCLSI---SDYHPDTWNPAWTVSTIITGLMSFMND 120
>Z11126-4|CAA77472.2| 180|Caenorhabditis elegans Hypothetical
protein ZK643.6 protein.
Length = 180
Score = 31.1 bits (67), Expect = 0.86
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = +1
Query: 169 HSPPTIGLTTEPVKRISIRDKLLVKEVQEMEENLPATC-SVKFEDPNLLSE 318
H+ PT+ T P++ +S LLV Q E PATC ++ NL S+
Sbjct: 2 HANPTLATTHSPIQ-LSTAQHLLVNVTQHCLEKCPATCGKCNRKNANLCSD 51
>L13200-1|AAA28193.1| 1000|Caenorhabditis elegans Hypothetical
protein ZK1236.3a protein.
Length = 1000
Score = 29.9 bits (64), Expect = 2.0
Identities = 20/58 (34%), Positives = 32/58 (55%), Gaps = 4/58 (6%)
Frame = -2
Query: 398 YSSVIMTL-NLNLPPFQYPSSGATVNMNSLSRFGSSNFTLQVAGRFS---SISCTSFT 237
YS+VI+ + + +LPP + PS+G T N ++ F S + + R SIS SF+
Sbjct: 98 YSTVILRMKDTSLPPLENPSNGGTYLFNLITVFPSIALSFNYSWRGDTGPSISIFSFS 155
>AL032653-6|CAA21716.1| 152|Caenorhabditis elegans Hypothetical
protein Y54E5B.4 protein.
Length = 152
Score = 29.9 bits (64), Expect = 2.0
Identities = 30/126 (23%), Positives = 51/126 (40%), Gaps = 4/126 (3%)
Frame = +1
Query: 235 LVKEVQEMEENLPATCSV-KFEDPNLLSEFILTVAPDEG-YWKGGKFKFSVIITEEYNMA 408
L+KE+ +++ P V N L ++ + V EG + G F +Y
Sbjct: 9 LMKELAQLKSEAPEGLLVDNTSTSNDLKQWKIGVVGAEGTLYAGEVFMLQFTFGPQYPFN 68
Query: 409 PPRVKCL--TKLWHPNINVDGDICLSLLRQTSIDEHGWAPTRRLKDVVWGLNSLFTDLLN 582
P V + T HP+I +G ICLS+L W P ++ V + S+ +
Sbjct: 69 SPEVMFVGETIPAHPHIYSNGHICLSIL------SDDWTPALSVQSVCLSILSMLSSSKE 122
Query: 583 FDDPLN 600
P++
Sbjct: 123 KKHPID 128
>AC025723-8|AAK29942.1| 1273|Caenorhabditis elegans C.elegans
homeobox protein 44,isoform a protein.
Length = 1273
Score = 29.9 bits (64), Expect = 2.0
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +1
Query: 226 DKLLVKEVQEMEENLPATCSVKFEDPNL 309
D L++++QE + N A C +KFEDP +
Sbjct: 445 DSELIEKIQEAKRN-KAVCELKFEDPTI 471
>Z68227-8|CAA92513.1| 275|Caenorhabditis elegans Hypothetical
protein F49C12.10 protein.
Length = 275
Score = 29.5 bits (63), Expect = 2.6
Identities = 17/43 (39%), Positives = 28/43 (65%), Gaps = 2/43 (4%)
Frame = +1
Query: 523 TRRLKDVVWG--LNSLFTDLLNFDDPLNIEAAEMYNKDKVQFQ 645
TR + ++V+G L+ F D +FD LN+EAA +Y+ K+ F+
Sbjct: 128 TRNMNNIVYGDALDLPFADN-SFDFVLNVEAAHLYSDYKLFFK 169
>AL590343-1|CAC35865.1| 387|Caenorhabditis elegans Hypothetical
protein Y66A7A.1 protein.
Length = 387
Score = 29.5 bits (63), Expect = 2.6
Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 4/55 (7%)
Frame = -2
Query: 569 VKSEFKPHTTSLSLL-VGAQPCSSIEVCLSNDKQMSPSTLILGCH---NFVKHFT 417
V FKP L+ + P +SI+ + D+ +TLI G H FVKH T
Sbjct: 246 VLKNFKPGALEKILIEISVSPDASIQNIVCMDQWTQATTLICGAHILSTFVKHLT 300
>AL032622-1|CAA21497.1| 387|Caenorhabditis elegans Y66A7A.1
protein.
Length = 387
Score = 29.5 bits (63), Expect = 2.6
Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 4/55 (7%)
Frame = -2
Query: 569 VKSEFKPHTTSLSLL-VGAQPCSSIEVCLSNDKQMSPSTLILGCH---NFVKHFT 417
V FKP L+ + P +SI+ + D+ +TLI G H FVKH T
Sbjct: 246 VLKNFKPGALEKILIEISVSPDASIQNIVCMDQWTQATTLICGAHILSTFVKHLT 300
>U53341-2|AAC69108.2| 645|Caenorhabditis elegans Hypothetical
protein F49E10.4a protein.
Length = 645
Score = 28.3 bits (60), Expect = 6.1
Identities = 16/56 (28%), Positives = 26/56 (46%)
Frame = -2
Query: 596 NGSSKLSRSVKSEFKPHTTSLSLLVGAQPCSSIEVCLSNDKQMSPSTLILGCHNFV 429
N S K ++ +EF+P +L +VG Q ++ + Q+ LGCH V
Sbjct: 117 NSSLKKHCAMFAEFQPCIATLMSIVGRQCPDLVKRAREDRNQLKTCLESLGCHGLV 172
>U23517-9|AAB93334.2| 314|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein6 protein.
Length = 314
Score = 28.3 bits (60), Expect = 6.1
Identities = 26/108 (24%), Positives = 48/108 (44%), Gaps = 1/108 (0%)
Frame = +1
Query: 235 LVKEVQEMEENLPATCSVKFEDPNLLSEFILTVAPDEGY-WKGGKFKFSVIITEEYNMAP 411
L+KE E+ + + ED NL E+ T+ G ++GG + +I +Y M P
Sbjct: 15 LMKEAMELRQPTEMYHAQPMED-NLF-EWHFTIRGTLGTDFEGGIYHGRIIFPADYPMKP 72
Query: 412 PRVKCLTKLWHPNINVDGDICLSLLRQTSIDEHGWAPTRRLKDVVWGL 555
P + LT + ++ +CLS+ + W P+ ++ + L
Sbjct: 73 PNLILLTP--NGRFELNKKVCLSI---SGYHPETWLPSWSIRTALLAL 115
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,099,369
Number of Sequences: 27780
Number of extensions: 300572
Number of successful extensions: 821
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 786
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 815
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1756472266
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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